RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 MYO5CQ9NQX4 1742 aa18.51■□□□□ 0.55
CLK4-215ENST00000611733 EFCAB2Q5VUJ9 269 aa18.51■□□□□ 0.55
CLK4-215ENST00000611733 PREX2Q70Z35 1606 aa18.51■□□□□ 0.55
CLK4-215ENST00000611733 TSPOAP1O95153 1857 aa18.51■□□□□ 0.55
CLK4-215ENST00000611733 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
CLK4-215ENST00000611733 FANCAO15360 1455 aa18.49■□□□□ 0.55
CLK4-215ENST00000611733 PPRC1Q5VV67 1664 aaKnown RBP18.48■□□□□ 0.55
CLK4-215ENST00000611733 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
CLK4-215ENST00000611733 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
CLK4-215ENST00000611733 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLK4-215ENST00000611733 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
CLK4-215ENST00000611733 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
CLK4-215ENST00000611733 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
CLK4-215ENST00000611733 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
CLK4-215ENST00000611733 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
CLK4-215ENST00000611733 CAMSAP2Q08AD1 1489 aa18.43■□□□□ 0.54
CLK4-215ENST00000611733 ARHGEF12Q9NZN5 1544 aa18.43■□□□□ 0.54
CLK4-215ENST00000611733 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
CLK4-215ENST00000611733 ITGAEP38570 1179 aa18.41■□□□□ 0.54
CLK4-215ENST00000611733 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
CLK4-215ENST00000611733 TEX14Q8IWB6 1497 aa18.4■□□□□ 0.54
CLK4-215ENST00000611733 NEO1Q92859 1461 aa18.4■□□□□ 0.54
CLK4-215ENST00000611733 ADGRL1O94910 1474 aa18.39■□□□□ 0.54
CLK4-215ENST00000611733 AFAP1Q8N556 730 aa18.39■□□□□ 0.53
CLK4-215ENST00000611733 MBD5Q9P267 1494 aa18.39■□□□□ 0.53
CLK4-215ENST00000611733 SYCP2Q9BX26 1530 aa18.38■□□□□ 0.53
CLK4-215ENST00000611733 COL17A1Q9UMD9 1497 aaPredicted RBP18.38■□□□□ 0.53
CLK4-215ENST00000611733 RAPGEF3O95398 923 aa18.38■□□□□ 0.53
CLK4-215ENST00000611733 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
CLK4-215ENST00000611733 ABCC1P33527 1531 aa18.37■□□□□ 0.53
CLK4-215ENST00000611733 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
CLK4-215ENST00000611733 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
CLK4-215ENST00000611733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLK4-215ENST00000611733 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
CLK4-215ENST00000611733 ABCC5O15440 1437 aa18.34■□□□□ 0.53
CLK4-215ENST00000611733 CFAP74Q9C0B2 1584 aa18.34■□□□□ 0.53
CLK4-215ENST00000611733 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
CLK4-215ENST00000611733 CHIC2Q9UKJ5 165 aa18.34■□□□□ 0.53
CLK4-215ENST00000611733 DAPK1P53355 1430 aa18.32■□□□□ 0.52
CLK4-215ENST00000611733 DENND4BO75064 1496 aaPredicted RBP18.32■□□□□ 0.52
CLK4-215ENST00000611733 POGZQ7Z3K3 1410 aa18.29■□□□□ 0.52
CLK4-215ENST00000611733 RSPH4AQ5TD94 716 aa18.29■□□□□ 0.52
CLK4-215ENST00000611733 CCDC141Q6ZP82 1450 aa18.29■□□□□ 0.52
CLK4-215ENST00000611733 ARHGEF5Q12774 1597 aa18.28■□□□□ 0.52
CLK4-215ENST00000611733 DNMT1P26358 1616 aaKnown RBP18.28■□□□□ 0.52
CLK4-215ENST00000611733 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
CLK4-215ENST00000611733 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
CLK4-215ENST00000611733 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
CLK4-215ENST00000611733 FRMPD1Q5SYB0 1578 aa18.26■□□□□ 0.51
CLK4-215ENST00000611733 SPAG9O60271 1321 aaKnown RBP18.26■□□□□ 0.51
CLK4-215ENST00000611733 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
CLK4-215ENST00000611733 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
CLK4-215ENST00000611733 RICTORQ6R327 1708 aa18.25■□□□□ 0.51
CLK4-215ENST00000611733 RRP7BPQ9NSQ0 103 aa18.24■□□□□ 0.51
CLK4-215ENST00000611733 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
CLK4-215ENST00000611733 KDM6BO15054 1643 aa18.22■□□□□ 0.51
CLK4-215ENST00000611733 KDM5CP41229 1560 aa18.22■□□□□ 0.51
CLK4-215ENST00000611733 CROCC2H7BZ55 1655 aa18.21■□□□□ 0.5
CLK4-215ENST00000611733 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
CLK4-215ENST00000611733 SHANK2Q9UPX8 1470 aa18.19■□□□□ 0.5
CLK4-215ENST00000611733 NCOA1Q15788 1441 aa18.19■□□□□ 0.5
CLK4-215ENST00000611733 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
CLK4-215ENST00000611733 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
CLK4-215ENST00000611733 RTEL1-TNFRSF6BF6WH68 1400 aa18.17■□□□□ 0.5
CLK4-215ENST00000611733 KIDINS220Q9ULH0 1771 aa18.17■□□□□ 0.5
CLK4-215ENST00000611733 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
CLK4-215ENST00000611733 MAST1Q9Y2H9 1570 aa18.17■□□□□ 0.5
CLK4-215ENST00000611733 INO80Q9ULG1 1556 aaPredicted RBP18.17■□□□□ 0.5
CLK4-215ENST00000611733 ANKRD30AQ9BXX3 1397 aa18.16■□□□□ 0.5
CLK4-215ENST00000611733 ZMYM4Q5VZL5 1548 aa18.16■□□□□ 0.5
CLK4-215ENST00000611733 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
CLK4-215ENST00000611733 ADGRL2O95490 1459 aa18.16■□□□□ 0.5
CLK4-215ENST00000611733 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
CLK4-215ENST00000611733 KIF15Q9NS87 1388 aa18.14■□□□□ 0.49
CLK4-215ENST00000611733 NAIPQ13075 1403 aa18.13■□□□□ 0.49
CLK4-215ENST00000611733 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
CLK4-215ENST00000611733 MAGI2Q86UL8 1455 aa18.12■□□□□ 0.49
CLK4-215ENST00000611733 ADGBQ8N7X0 1667 aa18.11■□□□□ 0.49
CLK4-215ENST00000611733 DIP2CQ9Y2E4 1556 aa18.1■□□□□ 0.49
CLK4-215ENST00000611733 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
CLK4-215ENST00000611733 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
CLK4-215ENST00000611733 DHX29Q7Z478 1369 aaKnown RBP18.08■□□□□ 0.48
CLK4-215ENST00000611733 ATP10AO60312 1499 aa18.07■□□□□ 0.48
CLK4-215ENST00000611733 SETD5Q9C0A6 1442 aa18.07■□□□□ 0.48
CLK4-215ENST00000611733 A2MP01023 1474 aa18.07■□□□□ 0.48
CLK4-215ENST00000611733 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
CLK4-215ENST00000611733 ARHGEF40Q8TER5 1519 aa18.05■□□□□ 0.48
CLK4-215ENST00000611733 DUOX2Q9NRD8 1548 aa18.05■□□□□ 0.48
CLK4-215ENST00000611733 RAB3GAP2Q9H2M9 1393 aa18.05■□□□□ 0.48
CLK4-215ENST00000611733 KIF3BO15066 747 aa18.04■□□□□ 0.48
CLK4-215ENST00000611733 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
CLK4-215ENST00000611733 GCC2Q8IWJ2 1684 aa18.01■□□□□ 0.47
CLK4-215ENST00000611733 ERBINQ96RT1 1412 aa18■□□□□ 0.47
CLK4-215ENST00000611733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.473e-8■■■■□ 20.2
CLK4-215ENST00000611733 MLECQ14165 292 aa17.99■□□□□ 0.47
CLK4-215ENST00000611733 GGT6Q6P531 493 aa17.99■□□□□ 0.47
CLK4-215ENST00000611733 ARID4BQ4LE39 1312 aaPredicted RBP17.99■□□□□ 0.47
CLK4-215ENST00000611733 TRIM52Q96A61 297 aa17.97■□□□□ 0.47
CLK4-215ENST00000611733 REREQ9P2R6 1566 aa17.96■□□□□ 0.47
CLK4-215ENST00000611733 AGLP35573 1532 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms