RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
CLK4-215ENST00000611733 CCDC180Q9P1Z9 1646 aa24.95■■□□□ 1.58
CLK4-215ENST00000611733 ABCC9O60706 1549 aa24.2■■□□□ 1.46
CLK4-215ENST00000611733 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
CLK4-215ENST00000611733 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
CLK4-215ENST00000611733 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
CLK4-215ENST00000611733 NACADO15069 1562 aa23.4■■□□□ 1.34
CLK4-215ENST00000611733 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
CLK4-215ENST00000611733 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
CLK4-215ENST00000611733 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
CLK4-215ENST00000611733 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
CLK4-215ENST00000611733 UNC13AQ9UPW8 1703 aa22.84■■□□□ 1.25
CLK4-215ENST00000611733 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
CLK4-215ENST00000611733 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
CLK4-215ENST00000611733 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
CLK4-215ENST00000611733 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
CLK4-215ENST00000611733 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
CLK4-215ENST00000611733 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
CLK4-215ENST00000611733 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
CLK4-215ENST00000611733 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
CLK4-215ENST00000611733 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
CLK4-215ENST00000611733 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
CLK4-215ENST00000611733 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
CLK4-215ENST00000611733 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
CLK4-215ENST00000611733 WIZO95785 1651 aa21.75■■□□□ 1.07
CLK4-215ENST00000611733 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
CLK4-215ENST00000611733 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
CLK4-215ENST00000611733 NCAPD3P42695 1498 aa21.65■■□□□ 1.06
CLK4-215ENST00000611733 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.04
CLK4-215ENST00000611733 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
CLK4-215ENST00000611733 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
CLK4-215ENST00000611733 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
CLK4-215ENST00000611733 NESP48681 1621 aa21.09■□□□□ 0.97
CLK4-215ENST00000611733 CADPSQ9ULU8 1353 aa21.07■□□□□ 0.96
CLK4-215ENST00000611733 CFTRP13569 1480 aa21.02■□□□□ 0.96
CLK4-215ENST00000611733 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
CLK4-215ENST00000611733 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
CLK4-215ENST00000611733 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
CLK4-215ENST00000611733 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
CLK4-215ENST00000611733 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
CLK4-215ENST00000611733 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
CLK4-215ENST00000611733 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
CLK4-215ENST00000611733 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
CLK4-215ENST00000611733 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
CLK4-215ENST00000611733 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
CLK4-215ENST00000611733 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
CLK4-215ENST00000611733 CUX1P39880 1505 aa20.57■□□□□ 0.88
CLK4-215ENST00000611733 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
CLK4-215ENST00000611733 THOC2Q8NI27 1593 aaKnown RBP20.56■□□□□ 0.88
CLK4-215ENST00000611733 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
CLK4-215ENST00000611733 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
CLK4-215ENST00000611733 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
CLK4-215ENST00000611733 WDR62O43379 1518 aa20.5■□□□□ 0.87
CLK4-215ENST00000611733 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
CLK4-215ENST00000611733 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
CLK4-215ENST00000611733 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
CLK4-215ENST00000611733 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
CLK4-215ENST00000611733 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
CLK4-215ENST00000611733 CUX2O14529 1486 aa20.38■□□□□ 0.85
CLK4-215ENST00000611733 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
CLK4-215ENST00000611733 SOGA1O94964 1423 aa20.35■□□□□ 0.85
CLK4-215ENST00000611733 TARBP1Q13395 1621 aaKnown RBP20.26■□□□□ 0.83
CLK4-215ENST00000611733 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
CLK4-215ENST00000611733 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
CLK4-215ENST00000611733 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
CLK4-215ENST00000611733 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
CLK4-215ENST00000611733 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
CLK4-215ENST00000611733 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.821e-8■■■□□ 18.8
CLK4-215ENST00000611733 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
CLK4-215ENST00000611733 FAM9AQ8IZU1 332 aaPredicted RBP20.15■□□□□ 0.82
CLK4-215ENST00000611733 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
CLK4-215ENST00000611733 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
CLK4-215ENST00000611733 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.8
CLK4-215ENST00000611733 ABCA5Q8WWZ7 1642 aa20.07■□□□□ 0.8
CLK4-215ENST00000611733 IGF1RP08069 1367 aa20.04■□□□□ 0.8
CLK4-215ENST00000611733 GRIN2BQ13224 1484 aa20■□□□□ 0.79
CLK4-215ENST00000611733 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
CLK4-215ENST00000611733 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
CLK4-215ENST00000611733 EEA1Q15075 1411 aa19.95■□□□□ 0.78
CLK4-215ENST00000611733 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
CLK4-215ENST00000611733 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
CLK4-215ENST00000611733 EHMT2Q96KQ7 1210 aa19.92■□□□□ 0.78
CLK4-215ENST00000611733 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
CLK4-215ENST00000611733 FBLN2P98095 1184 aa19.88■□□□□ 0.77
CLK4-215ENST00000611733 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
CLK4-215ENST00000611733 PRXQ9BXM0 1461 aa19.85■□□□□ 0.77
CLK4-215ENST00000611733 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
CLK4-215ENST00000611733 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
CLK4-215ENST00000611733 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
CLK4-215ENST00000611733 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
CLK4-215ENST00000611733 LOC105371045A0A1W2PR82 267 aa19.81■□□□□ 0.76
CLK4-215ENST00000611733 CUL7Q14999 1698 aa19.81■□□□□ 0.76
CLK4-215ENST00000611733 RAPGEF2Q9Y4G8 1499 aa19.8■□□□□ 0.76
CLK4-215ENST00000611733 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
CLK4-215ENST00000611733 CHD1O14646 1710 aa19.74■□□□□ 0.75
CLK4-215ENST00000611733 KIF21BO75037 1637 aa19.73■□□□□ 0.75
CLK4-215ENST00000611733 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
CLK4-215ENST00000611733 GOLGA3Q08378 1498 aa19.68■□□□□ 0.74
CLK4-215ENST00000611733 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
CLK4-215ENST00000611733 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms