RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 PHLDB1Q86UU1 1377 aa12.32□□□□□ -0.44
CLK4-214ENST00000611575 ATP10BO94823 1461 aa12.32□□□□□ -0.44
CLK4-214ENST00000611575 ABCA9Q8IUA7 1624 aa12.3□□□□□ -0.44
CLK4-214ENST00000611575 KIF21BO75037 1637 aa12.29□□□□□ -0.44
CLK4-214ENST00000611575 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
CLK4-214ENST00000611575 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
CLK4-214ENST00000611575 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
CLK4-214ENST00000611575 NEO1Q92859 1461 aa12.27□□□□□ -0.44
CLK4-214ENST00000611575 SAMD9Q5K651 1589 aa12.27□□□□□ -0.44
CLK4-214ENST00000611575 PTPRMP28827 1452 aa12.27□□□□□ -0.45
CLK4-214ENST00000611575 FRMPD1Q5SYB0 1578 aa12.26□□□□□ -0.45
CLK4-214ENST00000611575 KCNH8Q96L42 1107 aa12.26□□□□□ -0.45
CLK4-214ENST00000611575 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
CLK4-214ENST00000611575 NUP153P49790 1475 aaKnown RBP12.21□□□□□ -0.45
CLK4-214ENST00000611575 LMTK3Q96Q04 1460 aa12.21□□□□□ -0.45
CLK4-214ENST00000611575 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
CLK4-214ENST00000611575 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
CLK4-214ENST00000611575 RAPGEF6Q8TEU7 1601 aa12.19□□□□□ -0.46
CLK4-214ENST00000611575 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
CLK4-214ENST00000611575 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
CLK4-214ENST00000611575 ARHGEF40Q8TER5 1519 aa12.18□□□□□ -0.46
CLK4-214ENST00000611575 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
CLK4-214ENST00000611575 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
CLK4-214ENST00000611575 MADDQ8WXG6 1647 aa12.17□□□□□ -0.46
CLK4-214ENST00000611575 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
CLK4-214ENST00000611575 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
CLK4-214ENST00000611575 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
CLK4-214ENST00000611575 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
CLK4-214ENST00000611575 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
CLK4-214ENST00000611575 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
CLK4-214ENST00000611575 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
CLK4-214ENST00000611575 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
CLK4-214ENST00000611575 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
CLK4-214ENST00000611575 AKNAQ7Z591 1439 aa12.12□□□□□ -0.47
CLK4-214ENST00000611575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLK4-214ENST00000611575 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
CLK4-214ENST00000611575 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
CLK4-214ENST00000611575 FANCAO15360 1455 aa12.11□□□□□ -0.47
CLK4-214ENST00000611575 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
CLK4-214ENST00000611575 EEA1Q15075 1411 aa12.1□□□□□ -0.47
CLK4-214ENST00000611575 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
CLK4-214ENST00000611575 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
CLK4-214ENST00000611575 TTC37Q6PGP7 1564 aa12.09□□□□□ -0.47
CLK4-214ENST00000611575 FAM9AQ8IZU1 332 aaPredicted RBP12.08□□□□□ -0.48
CLK4-214ENST00000611575 PROM2Q8N271 834 aa12.08□□□□□ -0.48
CLK4-214ENST00000611575 CFAP74Q9C0B2 1584 aa12.08□□□□□ -0.48
CLK4-214ENST00000611575 EFCAB5A4FU69 1503 aa12.07□□□□□ -0.48
CLK4-214ENST00000611575 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
CLK4-214ENST00000611575 PLCH2O75038 1416 aa12.06□□□□□ -0.48
CLK4-214ENST00000611575 POGZQ7Z3K3 1410 aa12.06□□□□□ -0.48
CLK4-214ENST00000611575 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
CLK4-214ENST00000611575 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
CLK4-214ENST00000611575 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
CLK4-214ENST00000611575 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
CLK4-214ENST00000611575 HECW1Q76N89 1606 aa12.04□□□□□ -0.48
CLK4-214ENST00000611575 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
CLK4-214ENST00000611575 ARID4BQ4LE39 1312 aaPredicted RBP12.03□□□□□ -0.48
CLK4-214ENST00000611575 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLK4-214ENST00000611575 HSPA2P54652 639 aa12.01□□□□□ -0.49
CLK4-214ENST00000611575 SCAPERQ9BY12 1400 aa12.01□□□□□ -0.49
CLK4-214ENST00000611575 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
CLK4-214ENST00000611575 C9orf84Q5VXU9 1444 aa12□□□□□ -0.49
CLK4-214ENST00000611575 ATP10AO60312 1499 aa12□□□□□ -0.49
CLK4-214ENST00000611575 KDM5CP41229 1560 aa12□□□□□ -0.49
CLK4-214ENST00000611575 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
CLK4-214ENST00000611575 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
CLK4-214ENST00000611575 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
CLK4-214ENST00000611575 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
CLK4-214ENST00000611575 FER1L4A9Z1Z3 1794 aa11.95□□□□□ -0.5
CLK4-214ENST00000611575 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
CLK4-214ENST00000611575 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
CLK4-214ENST00000611575 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
CLK4-214ENST00000611575 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
CLK4-214ENST00000611575 AGLP35573 1532 aa11.93□□□□□ -0.5
CLK4-214ENST00000611575 EFCAB2Q5VUJ9 269 aa11.93□□□□□ -0.5
CLK4-214ENST00000611575 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
CLK4-214ENST00000611575 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
CLK4-214ENST00000611575 TROQ12816 1431 aaPredicted RBP11.93□□□□□ -0.5
CLK4-214ENST00000611575 KIF14Q15058 1648 aa11.93□□□□□ -0.5
CLK4-214ENST00000611575 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
CLK4-214ENST00000611575 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
CLK4-214ENST00000611575 PTPRTO14522 1441 aa11.9□□□□□ -0.5
CLK4-214ENST00000611575 MYO5CQ9NQX4 1742 aa11.9□□□□□ -0.5
CLK4-214ENST00000611575 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
CLK4-214ENST00000611575 MLECQ14165 292 aa11.89□□□□□ -0.51
CLK4-214ENST00000611575 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
CLK4-214ENST00000611575 UHRF1BP1Q6BDS2 1440 aa11.88□□□□□ -0.51
CLK4-214ENST00000611575 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
CLK4-214ENST00000611575 ABCA6Q8N139 1617 aa11.88□□□□□ -0.51
CLK4-214ENST00000611575 LTBP4Q8N2S1 1624 aa11.88□□□□□ -0.51
CLK4-214ENST00000611575 ABCC1P33527 1531 aa11.87□□□□□ -0.51
CLK4-214ENST00000611575 IQSEC2Q5JU85 1478 aa11.87□□□□□ -0.51
CLK4-214ENST00000611575 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
CLK4-214ENST00000611575 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
CLK4-214ENST00000611575 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
CLK4-214ENST00000611575 LRRIQ1Q96JM4 1722 aa11.85□□□□□ -0.51
CLK4-214ENST00000611575 NCOA1Q15788 1441 aa11.85□□□□□ -0.51
CLK4-214ENST00000611575 CDC42BPBQ9Y5S2 1711 aa11.84□□□□□ -0.51
CLK4-214ENST00000611575 HAX1O00165 279 aa11.84□□□□□ -0.51
CLK4-214ENST00000611575 ILDR2Q71H61 639 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms