RNA–Protein interactions for RNA: ENST00000611387.1

PACRG-210, Transcript of parkin coregulated, humanhuman

TSL 5 BASIC

Gene PACRG, Length 279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-210ENST00000611387 PHLDB1Q86UU1 1377 aa8.8□□□□□ -1
PACRG-210ENST00000611387 MED1Q15648 1581 aaPredicted RBP8.8□□□□□ -1
PACRG-210ENST00000611387 CLIP1P30622 1438 aa8.8□□□□□ -1
PACRG-210ENST00000611387 PREX1Q8TCU6 1659 aa8.78□□□□□ -1
PACRG-210ENST00000611387 ZMYM4Q5VZL5 1548 aa8.78□□□□□ -1
PACRG-210ENST00000611387 ATP10BO94823 1461 aa8.77□□□□□ -1
PACRG-210ENST00000611387 FER1L4A9Z1Z3 1794 aa8.77□□□□□ -1.01
PACRG-210ENST00000611387 UBAP1LF5GYI3 381 aa8.76□□□□□ -1.01
PACRG-210ENST00000611387 HSPA1LP34931 641 aa8.75□□□□□ -1.01
PACRG-210ENST00000611387 FHOD3Q2V2M9 1422 aa8.74□□□□□ -1.01
PACRG-210ENST00000611387 FANCAO15360 1455 aa8.74□□□□□ -1.01
PACRG-210ENST00000611387 ARHGEF12Q9NZN5 1544 aa8.74□□□□□ -1.01
PACRG-210ENST00000611387 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
PACRG-210ENST00000611387 CFAP74Q9C0B2 1584 aa8.73□□□□□ -1.01
PACRG-210ENST00000611387 EFCAB5A4FU69 1503 aa8.73□□□□□ -1.01
PACRG-210ENST00000611387 ZFYVE16Q7Z3T8 1539 aa8.73□□□□□ -1.01
PACRG-210ENST00000611387 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
PACRG-210ENST00000611387 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
PACRG-210ENST00000611387 PTPRTO14522 1441 aa8.71□□□□□ -1.01
PACRG-210ENST00000611387 DENND4BO75064 1496 aaPredicted RBP8.71□□□□□ -1.01
PACRG-210ENST00000611387 DMRT2Q9Y5R5 561 aa8.71□□□□□ -1.02
PACRG-210ENST00000611387 HECW1Q76N89 1606 aa8.7□□□□□ -1.02
PACRG-210ENST00000611387 TRIM26Q12899 539 aaPredicted RBP8.7□□□□□ -1.02
PACRG-210ENST00000611387 POGZQ7Z3K3 1410 aa8.7□□□□□ -1.02
PACRG-210ENST00000611387 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
PACRG-210ENST00000611387 VPS8Q8N3P4 1428 aa8.7□□□□□ -1.02
PACRG-210ENST00000611387 IQSEC2Q5JU85 1478 aa8.7□□□□□ -1.02
PACRG-210ENST00000611387 KCNA4P22459 653 aa8.69□□□□□ -1.02
PACRG-210ENST00000611387 PPARGC1BQ86YN6 1023 aaKnown RBP8.69□□□□□ -1.02
PACRG-210ENST00000611387 PCGF6Q9BYE7 350 aa8.69□□□□□ -1.02
PACRG-210ENST00000611387 SCAF1Q9H7N4 1312 aaKnown RBP8.69□□□□□ -1.02
PACRG-210ENST00000611387 UHRF1BP1Q6BDS2 1440 aa8.69□□□□□ -1.02
PACRG-210ENST00000611387 NUP153P49790 1475 aaKnown RBP8.69□□□□□ -1.02
PACRG-210ENST00000611387 MAGI2Q86UL8 1455 aa8.69□□□□□ -1.02
PACRG-210ENST00000611387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.69□□□□□ -1.02
PACRG-210ENST00000611387 PIP4K2BP78356 416 aa8.68□□□□□ -1.02
PACRG-210ENST00000611387 P3H3Q8IVL6 736 aa8.68□□□□□ -1.02
PACRG-210ENST00000611387 ATP1B4Q9UN42 357 aaPredicted RBP8.68□□□□□ -1.02
PACRG-210ENST00000611387 NCOA1Q15788 1441 aa8.66□□□□□ -1.02
PACRG-210ENST00000611387 NCKAP5LQ9HCH0 1330 aa8.66□□□□□ -1.02
PACRG-210ENST00000611387 RGS17Q9UGC6 210 aaPredicted RBP8.66□□□□□ -1.02
PACRG-210ENST00000611387 C3P01024 1663 aa8.64□□□□□ -1.03
PACRG-210ENST00000611387 ARHGAP35Q9NRY4 1499 aa8.64□□□□□ -1.03
PACRG-210ENST00000611387 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
PACRG-210ENST00000611387 SETD1BQ9UPS6 1966 aaKnown RBP8.63□□□□□ -1.03
PACRG-210ENST00000611387 REREQ9P2R6 1566 aa8.63□□□□□ -1.03
PACRG-210ENST00000611387 KDM5CP41229 1560 aa8.62□□□□□ -1.03
PACRG-210ENST00000611387 CAMSAP1Q5T5Y3 1602 aa8.62□□□□□ -1.03
PACRG-210ENST00000611387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.61□□□□□ -1.03
PACRG-210ENST00000611387 HNRNPUL2Q1KMD3 747 aaKnown RBP8.61□□□□□ -1.03
PACRG-210ENST00000611387 NCBP3Q53F19 620 aaKnown RBP8.61□□□□□ -1.03
PACRG-210ENST00000611387 ATP10AO60312 1499 aa8.61□□□□□ -1.03
PACRG-210ENST00000611387 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
PACRG-210ENST00000611387 ALKQ9UM73 1620 aa8.61□□□□□ -1.03
PACRG-210ENST00000611387 DIP2CQ9Y2E4 1556 aa8.61□□□□□ -1.03
PACRG-210ENST00000611387 SETD1AO15047 1707 aaKnown RBP8.6□□□□□ -1.03
PACRG-210ENST00000611387 ABCA6Q8N139 1617 aa8.6□□□□□ -1.03
PACRG-210ENST00000611387 MYO5CQ9NQX4 1742 aa8.58□□□□□ -1.04
PACRG-210ENST00000611387 SCAPERQ9BY12 1400 aa8.58□□□□□ -1.04
PACRG-210ENST00000611387 POTEAQ6S8J7 498 aa8.58□□□□□ -1.04
PACRG-210ENST00000611387 PLCH2O75038 1416 aa8.57□□□□□ -1.04
PACRG-210ENST00000611387 MAPK8IP2Q13387 824 aaPredicted RBP8.57□□□□□ -1.04
PACRG-210ENST00000611387 FYCO1Q9BQS8 1478 aa8.57□□□□□ -1.04
PACRG-210ENST00000611387 ZNF142P52746 1687 aaPredicted RBP8.56□□□□□ -1.04
PACRG-210ENST00000611387 AGLP35573 1532 aa8.56□□□□□ -1.04
PACRG-210ENST00000611387 ZNF518AQ6AHZ1 1483 aa8.56□□□□□ -1.04
PACRG-210ENST00000611387 MROH2AA6NES4 1674 aa8.56□□□□□ -1.04
PACRG-210ENST00000611387 TRAPPC8Q9Y2L5 1435 aa8.55□□□□□ -1.04
PACRG-210ENST00000611387 CDK13Q14004 1512 aaKnown RBP8.55□□□□□ -1.04
PACRG-210ENST00000611387 CNKSR2Q8WXI2 1034 aa8.55□□□□□ -1.04
PACRG-210ENST00000611387 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
PACRG-210ENST00000611387 KIF14Q15058 1648 aa8.54□□□□□ -1.04
PACRG-210ENST00000611387 MYO3AQ8NEV4 1616 aa8.54□□□□□ -1.04
PACRG-210ENST00000611387 TIAM1Q13009 1591 aa8.53□□□□□ -1.04
PACRG-210ENST00000611387 AFAP1Q8N556 730 aa8.53□□□□□ -1.04
PACRG-210ENST00000611387 TCOF1Q13428 1488 aaKnown RBP8.52□□□□□ -1.05
PACRG-210ENST00000611387 MAP3K1Q13233 1512 aa8.52□□□□□ -1.05
PACRG-210ENST00000611387 PLA2R1Q13018 1463 aa8.51□□□□□ -1.05
PACRG-210ENST00000611387 CCDC18Q5T9S5 1454 aa8.51□□□□□ -1.05
PACRG-210ENST00000611387 MLH3Q9UHC1 1453 aa8.51□□□□□ -1.05
PACRG-210ENST00000611387 MTUS2Q5JR59 1369 aa8.51□□□□□ -1.05
PACRG-210ENST00000611387 PLEKHD1A6NEE1 506 aa8.51□□□□□ -1.05
PACRG-210ENST00000611387 TOM1O60784 492 aa8.51□□□□□ -1.05
PACRG-210ENST00000611387 NPATQ14207 1427 aa8.51□□□□□ -1.05
PACRG-210ENST00000611387 ABCC1P33527 1531 aa8.5□□□□□ -1.05
PACRG-210ENST00000611387 ITSN2Q9NZM3 1697 aa8.5□□□□□ -1.05
PACRG-210ENST00000611387 CDC42BPBQ9Y5S2 1711 aa8.5□□□□□ -1.05
PACRG-210ENST00000611387 KIDINS220Q9ULH0 1771 aa8.5□□□□□ -1.05
PACRG-210ENST00000611387 CEP170BQ9Y4F5 1589 aaPredicted RBP8.49□□□□□ -1.05
PACRG-210ENST00000611387 CNTLNQ9NXG0 1405 aa8.49□□□□□ -1.05
PACRG-210ENST00000611387 PREX2Q70Z35 1606 aa8.48□□□□□ -1.05
PACRG-210ENST00000611387 MYT1LQ9UL68 1186 aa8.48□□□□□ -1.05
PACRG-210ENST00000611387 CDK11AQ9UQ88 783 aaPredicted RBP8.48□□□□□ -1.05
PACRG-210ENST00000611387 LRRC9Q6ZRR7 1453 aa8.48□□□□□ -1.05
PACRG-210ENST00000611387 SUPT6HQ7KZ85 1726 aaKnown RBP8.48□□□□□ -1.05
PACRG-210ENST00000611387 LRRIQ1Q96JM4 1722 aa8.48□□□□□ -1.05
PACRG-210ENST00000611387 NEURL4Q96JN8 1562 aa8.48□□□□□ -1.05
PACRG-210ENST00000611387 NPM3O75607 178 aaKnown RBP8.47□□□□□ -1.05
PACRG-210ENST00000611387 KANK4Q5T7N3 995 aaPredicted RBP8.47□□□□□ -1.05
PACRG-210ENST00000611387 ARHGAP5Q13017 1502 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms