RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 PPARGC1BQ86YN6 1023 aaKnown RBP13.72□□□□□ -0.21
ITGB5-212ENST00000608657 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
ITGB5-212ENST00000608657 MYOM3Q5VTT5 1437 aa13.7□□□□□ -0.22
ITGB5-212ENST00000608657 FANCAO15360 1455 aa13.69□□□□□ -0.22
ITGB5-212ENST00000608657 PHLDB1Q86UU1 1377 aa13.69□□□□□ -0.22
ITGB5-212ENST00000608657 NEO1Q92859 1461 aa13.68□□□□□ -0.22
ITGB5-212ENST00000608657 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
ITGB5-212ENST00000608657 CFDP1Q9UEE9 299 aaPredicted RBP13.67□□□□□ -0.22
ITGB5-212ENST00000608657 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
ITGB5-212ENST00000608657 AKNAQ7Z591 1439 aa13.65□□□□□ -0.22
ITGB5-212ENST00000608657 ADGRL1O94910 1474 aa13.65□□□□□ -0.22
ITGB5-212ENST00000608657 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
ITGB5-212ENST00000608657 PTPN23Q9H3S7 1636 aa13.64□□□□□ -0.23
ITGB5-212ENST00000608657 ZNF777Q9ULD5 760 aaPredicted RBP13.64□□□□□ -0.23
ITGB5-212ENST00000608657 KDM6BO15054 1643 aa13.64□□□□□ -0.23
ITGB5-212ENST00000608657 ABCC1P33527 1531 aa13.64□□□□□ -0.23
ITGB5-212ENST00000608657 FGD6Q6ZV73 1430 aa13.64□□□□□ -0.23
ITGB5-212ENST00000608657 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
ITGB5-212ENST00000608657 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
ITGB5-212ENST00000608657 SYCP2Q9BX26 1530 aa13.62□□□□□ -0.23
ITGB5-212ENST00000608657 SCAPERQ9BY12 1400 aa13.6□□□□□ -0.23
ITGB5-212ENST00000608657 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
ITGB5-212ENST00000608657 RICTORQ6R327 1708 aa13.59□□□□□ -0.23
ITGB5-212ENST00000608657 DENND4BO75064 1496 aaPredicted RBP13.59□□□□□ -0.23
ITGB5-212ENST00000608657 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.24
ITGB5-212ENST00000608657 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
ITGB5-212ENST00000608657 KIAA1107Q9UPP5 1409 aa13.57□□□□□ -0.24
ITGB5-212ENST00000608657 ARHGEF12Q9NZN5 1544 aa13.57□□□□□ -0.24
ITGB5-212ENST00000608657 ARHGEF5Q12774 1597 aa13.57□□□□□ -0.24
ITGB5-212ENST00000608657 FRMPD1Q5SYB0 1578 aa13.57□□□□□ -0.24
ITGB5-212ENST00000608657 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
ITGB5-212ENST00000608657 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
ITGB5-212ENST00000608657 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
ITGB5-212ENST00000608657 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
ITGB5-212ENST00000608657 COL17A1Q9UMD9 1497 aaPredicted RBP13.55□□□□□ -0.24
ITGB5-212ENST00000608657 DNMT1P26358 1616 aaKnown RBP13.55□□□□□ -0.24
ITGB5-212ENST00000608657 FAM50AQ14320 339 aaKnown RBP13.55□□□□□ -0.24
ITGB5-212ENST00000608657 KDM5CP41229 1560 aa13.54□□□□□ -0.24
ITGB5-212ENST00000608657 HNRNPMP52272 730 aaKnown RBP eCLIP13.54□□□□□ -0.24
ITGB5-212ENST00000608657 TRAPPC8Q9Y2L5 1435 aa13.54□□□□□ -0.24
ITGB5-212ENST00000608657 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
ITGB5-212ENST00000608657 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
ITGB5-212ENST00000608657 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
ITGB5-212ENST00000608657 RAPGEF3O95398 923 aa13.52□□□□□ -0.25
ITGB5-212ENST00000608657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
ITGB5-212ENST00000608657 DAPK1P53355 1430 aa13.51□□□□□ -0.25
ITGB5-212ENST00000608657 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
ITGB5-212ENST00000608657 INO80Q9ULG1 1556 aaPredicted RBP13.5□□□□□ -0.25
ITGB5-212ENST00000608657 AFAP1Q8N556 730 aa13.5□□□□□ -0.25
ITGB5-212ENST00000608657 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
ITGB5-212ENST00000608657 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
ITGB5-212ENST00000608657 ATP7AQ04656 1500 aa13.49□□□□□ -0.25
ITGB5-212ENST00000608657 ZFYVE16Q7Z3T8 1539 aa13.49□□□□□ -0.25
ITGB5-212ENST00000608657 SHANK2Q9UPX8 1470 aa13.49□□□□□ -0.25
ITGB5-212ENST00000608657 KIDINS220Q9ULH0 1771 aa13.49□□□□□ -0.25
ITGB5-212ENST00000608657 ABCC5O15440 1437 aa13.48□□□□□ -0.25
ITGB5-212ENST00000608657 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
ITGB5-212ENST00000608657 ARHGEF40Q8TER5 1519 aa13.48□□□□□ -0.25
ITGB5-212ENST00000608657 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
ITGB5-212ENST00000608657 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
ITGB5-212ENST00000608657 SPAG9O60271 1321 aaKnown RBP13.47□□□□□ -0.25
ITGB5-212ENST00000608657 TSPY4P0CV99 314 aa13.47□□□□□ -0.25
ITGB5-212ENST00000608657 TSPY10P0CW01 314 aa13.47□□□□□ -0.25
ITGB5-212ENST00000608657 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
ITGB5-212ENST00000608657 ABCA6Q8N139 1617 aa13.46□□□□□ -0.25
ITGB5-212ENST00000608657 RTEL1-TNFRSF6BF6WH68 1400 aa13.46□□□□□ -0.26
ITGB5-212ENST00000608657 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
ITGB5-212ENST00000608657 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
ITGB5-212ENST00000608657 ITGAEP38570 1179 aa13.45□□□□□ -0.26
ITGB5-212ENST00000608657 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
ITGB5-212ENST00000608657 CHIC2Q9UKJ5 165 aa13.42□□□□□ -0.26
ITGB5-212ENST00000608657 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
ITGB5-212ENST00000608657 PTPRKQ15262 1439 aa13.41□□□□□ -0.26
ITGB5-212ENST00000608657 ANKRD30AQ9BXX3 1397 aa13.41□□□□□ -0.26
ITGB5-212ENST00000608657 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
ITGB5-212ENST00000608657 ATP10AO60312 1499 aa13.4□□□□□ -0.26
ITGB5-212ENST00000608657 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
ITGB5-212ENST00000608657 GCC2Q8IWJ2 1684 aa13.38□□□□□ -0.27
ITGB5-212ENST00000608657 A2MP01023 1474 aa13.38□□□□□ -0.27
ITGB5-212ENST00000608657 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
ITGB5-212ENST00000608657 KIF15Q9NS87 1388 aa13.38□□□□□ -0.27
ITGB5-212ENST00000608657 HRCP23327 699 aa13.38□□□□□ -0.27
ITGB5-212ENST00000608657 DUOX2Q9NRD8 1548 aa13.38□□□□□ -0.27
ITGB5-212ENST00000608657 NCOA1Q15788 1441 aa13.38□□□□□ -0.27
ITGB5-212ENST00000608657 SIGLEC1Q9BZZ2 1709 aa13.36□□□□□ -0.27
ITGB5-212ENST00000608657 EIF2AK4Q9P2K8 1649 aaKnown RBP13.36□□□□□ -0.27
ITGB5-212ENST00000608657 PCGF6Q9BYE7 350 aa13.35□□□□□ -0.27
ITGB5-212ENST00000608657 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
ITGB5-212ENST00000608657 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
ITGB5-212ENST00000608657 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
ITGB5-212ENST00000608657 AGLP35573 1532 aa13.34□□□□□ -0.27
ITGB5-212ENST00000608657 BCORL1Q5H9F3 1711 aa13.33□□□□□ -0.27
ITGB5-212ENST00000608657 HFM1A2PYH4 1435 aa13.32□□□□□ -0.28
ITGB5-212ENST00000608657 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
ITGB5-212ENST00000608657 ANKRD50Q9ULJ7 1429 aa13.31□□□□□ -0.28
ITGB5-212ENST00000608657 NAIPQ13075 1403 aa13.3□□□□□ -0.28
ITGB5-212ENST00000608657 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
ITGB5-212ENST00000608657 DEPDC5O75140 1603 aa13.28□□□□□ -0.28
ITGB5-212ENST00000608657 KIF3BO15066 747 aa13.27□□□□□ -0.29
ITGB5-212ENST00000608657 UNC13BO14795 1591 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms