RNA–Protein interactions for RNA: ENST00000607866.1

ITM2B-204, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-204ENST00000607866 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
ITM2B-204ENST00000607866 KDM5BQ9UGL1 1544 aa10.21□□□□□ -0.78
ITM2B-204ENST00000607866 ABCB7O75027 752 aa10.2□□□□□ -0.78
ITM2B-204ENST00000607866 CTTNBP2Q8WZ74 1663 aa10.19□□□□□ -0.78
ITM2B-204ENST00000607866 SPRYD3Q8NCJ5 442 aa10.18□□□□□ -0.78
ITM2B-204ENST00000607866 STAG3Q9UJ98 1225 aa10.18□□□□□ -0.78
ITM2B-204ENST00000607866 PPRC1Q5VV67 1664 aaKnown RBP10.18□□□□□ -0.78
ITM2B-204ENST00000607866 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
ITM2B-204ENST00000607866 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
ITM2B-204ENST00000607866 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
ITM2B-204ENST00000607866 PRXQ9BXM0 1461 aa10.17□□□□□ -0.78
ITM2B-204ENST00000607866 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.78
ITM2B-204ENST00000607866 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
ITM2B-204ENST00000607866 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
ITM2B-204ENST00000607866 TEX14Q8IWB6 1497 aa10.14□□□□□ -0.79
ITM2B-204ENST00000607866 WDR7Q9Y4E6 1490 aa10.14□□□□□ -0.79
ITM2B-204ENST00000607866 KDM4FA0A1W2PPD8 638 aa10.13□□□□□ -0.79
ITM2B-204ENST00000607866 ABCA8O94911 1581 aa10.12□□□□□ -0.79
ITM2B-204ENST00000607866 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
ITM2B-204ENST00000607866 MIER1Q8N108 512 aa10.1□□□□□ -0.79
ITM2B-204ENST00000607866 SSUH2Q9Y2M2 353 aa10.1□□□□□ -0.79
ITM2B-204ENST00000607866 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
ITM2B-204ENST00000607866 CFAP43Q8NDM7 1665 aa10.08□□□□□ -0.8
ITM2B-204ENST00000607866 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
ITM2B-204ENST00000607866 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
ITM2B-204ENST00000607866 CD109Q6YHK3 1445 aa10.07□□□□□ -0.8
ITM2B-204ENST00000607866 ADGRL1O94910 1474 aa10.06□□□□□ -0.8
ITM2B-204ENST00000607866 DSG3P32926 999 aa10.06□□□□□ -0.8
ITM2B-204ENST00000607866 SAMD9Q5K651 1589 aa10.05□□□□□ -0.8
ITM2B-204ENST00000607866 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
ITM2B-204ENST00000607866 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
ITM2B-204ENST00000607866 SPDYE2Q495Y8 402 aa10.05□□□□□ -0.8
ITM2B-204ENST00000607866 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
ITM2B-204ENST00000607866 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
ITM2B-204ENST00000607866 EEA1Q15075 1411 aa10.04□□□□□ -0.8
ITM2B-204ENST00000607866 ATP10BO94823 1461 aa10.03□□□□□ -0.8
ITM2B-204ENST00000607866 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
ITM2B-204ENST00000607866 RAPGEF6Q8TEU7 1601 aa10□□□□□ -0.81
ITM2B-204ENST00000607866 ARID3CA6NKF2 412 aa10□□□□□ -0.81
ITM2B-204ENST00000607866 ARAP3Q8WWN8 1544 aa10□□□□□ -0.81
ITM2B-204ENST00000607866 ABCA9Q8IUA7 1624 aa10□□□□□ -0.81
ITM2B-204ENST00000607866 PHLDB1Q86UU1 1377 aa9.99□□□□□ -0.81
ITM2B-204ENST00000607866 NUP153P49790 1475 aaKnown RBP9.98□□□□□ -0.81
ITM2B-204ENST00000607866 HS6ST3Q8IZP7 471 aa9.97□□□□□ -0.81
ITM2B-204ENST00000607866 FHOD3Q2V2M9 1422 aa9.96□□□□□ -0.82
ITM2B-204ENST00000607866 NEO1Q92859 1461 aa9.96□□□□□ -0.82
ITM2B-204ENST00000607866 EFCAB5A4FU69 1503 aa9.96□□□□□ -0.82
ITM2B-204ENST00000607866 KIF21BO75037 1637 aa9.96□□□□□ -0.82
ITM2B-204ENST00000607866 NBR1Q14596 966 aa9.95□□□□□ -0.82
ITM2B-204ENST00000607866 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
ITM2B-204ENST00000607866 RANGAP1P46060 587 aaPredicted RBP9.94□□□□□ -0.82
ITM2B-204ENST00000607866 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
ITM2B-204ENST00000607866 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
ITM2B-204ENST00000607866 PLEKHD1A6NEE1 506 aa9.91□□□□□ -0.82
ITM2B-204ENST00000607866 RAPGEF3O95398 923 aa9.91□□□□□ -0.82
ITM2B-204ENST00000607866 FRMPD1Q5SYB0 1578 aa9.9□□□□□ -0.82
ITM2B-204ENST00000607866 NKX1-1Q15270 411 aaPredicted RBP9.9□□□□□ -0.82
ITM2B-204ENST00000607866 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
ITM2B-204ENST00000607866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.88□□□□□ -0.83
ITM2B-204ENST00000607866 FANCAO15360 1455 aa9.88□□□□□ -0.83
ITM2B-204ENST00000607866 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
ITM2B-204ENST00000607866 ADAMTSL3P82987 1691 aa9.87□□□□□ -0.83
ITM2B-204ENST00000607866 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
ITM2B-204ENST00000607866 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
ITM2B-204ENST00000607866 AKNAQ7Z591 1439 aa9.87□□□□□ -0.83
ITM2B-204ENST00000607866 TTC37Q6PGP7 1564 aa9.87□□□□□ -0.83
ITM2B-204ENST00000607866 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
ITM2B-204ENST00000607866 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
ITM2B-204ENST00000607866 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
ITM2B-204ENST00000607866 CDK13Q14004 1512 aaKnown RBP9.86□□□□□ -0.83
ITM2B-204ENST00000607866 PTPRMP28827 1452 aa9.85□□□□□ -0.83
ITM2B-204ENST00000607866 BCORL1Q5H9F3 1711 aa9.85□□□□□ -0.83
ITM2B-204ENST00000607866 GTPBP6O43824 516 aaPredicted RBP9.85□□□□□ -0.83
ITM2B-204ENST00000607866 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
ITM2B-204ENST00000607866 HECW1Q76N89 1606 aa9.85□□□□□ -0.83
ITM2B-204ENST00000607866 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
ITM2B-204ENST00000607866 ILDR1Q86SU0 546 aaPredicted RBP9.84□□□□□ -0.83
ITM2B-204ENST00000607866 ARHGAP35Q9NRY4 1499 aa9.84□□□□□ -0.83
ITM2B-204ENST00000607866 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
ITM2B-204ENST00000607866 NUBP1P53384 320 aa9.83□□□□□ -0.84
ITM2B-204ENST00000607866 MAGI2Q86UL8 1455 aa9.83□□□□□ -0.84
ITM2B-204ENST00000607866 PLCH2O75038 1416 aa9.82□□□□□ -0.84
ITM2B-204ENST00000607866 MADDQ8WXG6 1647 aa9.82□□□□□ -0.84
ITM2B-204ENST00000607866 GSE1Q14687 1217 aa9.82□□□□□ -0.84
ITM2B-204ENST00000607866 CDK11AQ9UQ88 783 aaPredicted RBP9.82□□□□□ -0.84
ITM2B-204ENST00000607866 ZFYVE16Q7Z3T8 1539 aa9.81□□□□□ -0.84
ITM2B-204ENST00000607866 POGZQ7Z3K3 1410 aa9.81□□□□□ -0.84
ITM2B-204ENST00000607866 MYO5CQ9NQX4 1742 aa9.8□□□□□ -0.84
ITM2B-204ENST00000607866 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
ITM2B-204ENST00000607866 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
ITM2B-204ENST00000607866 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
ITM2B-204ENST00000607866 KIF14Q15058 1648 aa9.79□□□□□ -0.84
ITM2B-204ENST00000607866 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
ITM2B-204ENST00000607866 YEATS2Q9ULM3 1422 aa9.79□□□□□ -0.84
ITM2B-204ENST00000607866 PCF11O94913 1555 aaKnown RBP9.79□□□□□ -0.84
ITM2B-204ENST00000607866 RIMS1Q86UR5 1692 aaKnown RBP9.78□□□□□ -0.84
ITM2B-204ENST00000607866 EFCAB2Q5VUJ9 269 aa9.78□□□□□ -0.84
ITM2B-204ENST00000607866 CLIP1P30622 1438 aa9.78□□□□□ -0.84
ITM2B-204ENST00000607866 TROQ12816 1431 aaPredicted RBP9.78□□□□□ -0.84
ITM2B-204ENST00000607866 LMTK3Q96Q04 1460 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms