RNA–Protein interactions for RNA: ENST00000606248.5

MED16-210, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-210ENST00000606248 CCDC7Q96M83 1385 aa19.19■□□□□ 0.66
MED16-210ENST00000606248 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
MED16-210ENST00000606248 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
MED16-210ENST00000606248 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
MED16-210ENST00000606248 FBLN2P98095 1184 aa19.16■□□□□ 0.66
MED16-210ENST00000606248 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
MED16-210ENST00000606248 ERICH6Q7L0X2 663 aa19.12■□□□□ 0.65
MED16-210ENST00000606248 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
MED16-210ENST00000606248 KDM2AQ9Y2K7 1162 aa19.11■□□□□ 0.65
MED16-210ENST00000606248 ANKRD30BQ9BXX2 1392 aa19.11■□□□□ 0.65
MED16-210ENST00000606248 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
MED16-210ENST00000606248 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
MED16-210ENST00000606248 NCOA1Q15788 1441 aa19.09■□□□□ 0.65
MED16-210ENST00000606248 TCOF1Q13428 1488 aaKnown RBP19.09■□□□□ 0.65
MED16-210ENST00000606248 CFDP1Q9UEE9 299 aaPredicted RBP19.08■□□□□ 0.65
MED16-210ENST00000606248 DAPK1P53355 1430 aa19.08■□□□□ 0.65
MED16-210ENST00000606248 HECW1Q76N89 1606 aa19.08■□□□□ 0.65
MED16-210ENST00000606248 IQGAP2Q13576 1575 aa19.08■□□□□ 0.64
MED16-210ENST00000606248 ABCC5O15440 1437 aa19.08■□□□□ 0.64
MED16-210ENST00000606248 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
MED16-210ENST00000606248 GCC2Q8IWJ2 1684 aa19.07■□□□□ 0.64
MED16-210ENST00000606248 PKD2Q13563 968 aa19.06■□□□□ 0.64
MED16-210ENST00000606248 TARBP1Q13395 1621 aaKnown RBP19.06■□□□□ 0.64
MED16-210ENST00000606248 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
MED16-210ENST00000606248 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
MED16-210ENST00000606248 ZBED9Q6R2W3 1325 aa19.02■□□□□ 0.64
MED16-210ENST00000606248 RPRD2Q5VT52 1461 aaKnown RBP19.02■□□□□ 0.64
MED16-210ENST00000606248 MIA2Q96PC5 1412 aa19.02■□□□□ 0.64
MED16-210ENST00000606248 WDR62O43379 1518 aa19.01■□□□□ 0.63
MED16-210ENST00000606248 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
MED16-210ENST00000606248 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
MED16-210ENST00000606248 USP47Q96K76 1375 aa18.97■□□□□ 0.63
MED16-210ENST00000606248 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
MED16-210ENST00000606248 SPATA31E1Q6ZUB1 1445 aa18.96■□□□□ 0.63
MED16-210ENST00000606248 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
MED16-210ENST00000606248 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
MED16-210ENST00000606248 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
MED16-210ENST00000606248 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
MED16-210ENST00000606248 NBR1Q14596 966 aa18.94■□□□□ 0.62
MED16-210ENST00000606248 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
MED16-210ENST00000606248 PLB1Q6P1J6 1458 aa18.94■□□□□ 0.62
MED16-210ENST00000606248 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
MED16-210ENST00000606248 DISP1Q96F81 1524 aa18.92■□□□□ 0.62
MED16-210ENST00000606248 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
MED16-210ENST00000606248 PZPP20742 1482 aa18.92■□□□□ 0.62
MED16-210ENST00000606248 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
MED16-210ENST00000606248 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
MED16-210ENST00000606248 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
MED16-210ENST00000606248 ROCK1Q13464 1354 aa18.91■□□□□ 0.62
MED16-210ENST00000606248 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
MED16-210ENST00000606248 HNRNPMP52272 730 aaKnown RBP eCLIP18.9■□□□□ 0.62
MED16-210ENST00000606248 NUP155O75694 1391 aa18.89■□□□□ 0.62
MED16-210ENST00000606248 BCORL1Q5H9F3 1711 aa18.89■□□□□ 0.61
MED16-210ENST00000606248 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
MED16-210ENST00000606248 CAMSAP2Q08AD1 1489 aa18.88■□□□□ 0.61
MED16-210ENST00000606248 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
MED16-210ENST00000606248 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
MED16-210ENST00000606248 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
MED16-210ENST00000606248 ERICH6BQ5W0A0 696 aa18.85■□□□□ 0.61
MED16-210ENST00000606248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
MED16-210ENST00000606248 KIF14Q15058 1648 aa18.84■□□□□ 0.61
MED16-210ENST00000606248 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.61
MED16-210ENST00000606248 KIAA0586Q9BVV6 1533 aa18.83■□□□□ 0.61
MED16-210ENST00000606248 GPATCH8Q9UKJ3 1502 aaKnown RBP18.83■□□□□ 0.61
MED16-210ENST00000606248 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.61
MED16-210ENST00000606248 RAPGEF6Q8TEU7 1601 aa18.83■□□□□ 0.6
MED16-210ENST00000606248 NPM2Q86SE8 214 aaKnown RBP18.82■□□□□ 0.6
MED16-210ENST00000606248 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
MED16-210ENST00000606248 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
MED16-210ENST00000606248 ANKRD50Q9ULJ7 1429 aa18.82■□□□□ 0.6
MED16-210ENST00000606248 PLEKHD1A6NEE1 506 aa18.81■□□□□ 0.6
MED16-210ENST00000606248 ANKRD30AQ9BXX3 1397 aa18.8■□□□□ 0.6
MED16-210ENST00000606248 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
MED16-210ENST00000606248 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
MED16-210ENST00000606248 SKAP1Q86WV1 359 aa18.79■□□□□ 0.6
MED16-210ENST00000606248 NBPF1Q3BBV0 1214 aa18.79■□□□□ 0.6
MED16-210ENST00000606248 GRIN2AQ12879 1464 aa18.78■□□□□ 0.6
MED16-210ENST00000606248 CC2D1BQ5T0F9 858 aaKnown RBP18.78■□□□□ 0.6
MED16-210ENST00000606248 SMG6Q86US8 1419 aaKnown RBP18.78■□□□□ 0.6
MED16-210ENST00000606248 EXOC6Q8TAG9 804 aa18.77■□□□□ 0.6
MED16-210ENST00000606248 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.59
MED16-210ENST00000606248 CDCA7LQ96GN5 454 aa18.76■□□□□ 0.59
MED16-210ENST00000606248 PLIN1O60240 522 aa18.75■□□□□ 0.59
MED16-210ENST00000606248 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
MED16-210ENST00000606248 MBD5Q9P267 1494 aa18.73■□□□□ 0.59
MED16-210ENST00000606248 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
MED16-210ENST00000606248 IFT140Q96RY7 1462 aa18.72■□□□□ 0.59
MED16-210ENST00000606248 KDM5CP41229 1560 aa18.71■□□□□ 0.58
MED16-210ENST00000606248 C9orf84Q5VXU9 1444 aa18.7■□□□□ 0.58
MED16-210ENST00000606248 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
MED16-210ENST00000606248 KIF15Q9NS87 1388 aa18.69■□□□□ 0.58
MED16-210ENST00000606248 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
MED16-210ENST00000606248 MYBBP1AQ9BQG0 1328 aaKnown RBP18.68■□□□□ 0.58
MED16-210ENST00000606248 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
MED16-210ENST00000606248 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
MED16-210ENST00000606248 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
MED16-210ENST00000606248 ERCC6Q03468 1493 aa18.66■□□□□ 0.58
MED16-210ENST00000606248 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
MED16-210ENST00000606248 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
MED16-210ENST00000606248 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms