RNA: ENST00000606248.5

MED16-210, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-210ENST00000606248 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15□□□□□ -0.014e-12■■■■■ 70.6
MED16-210ENST00000606248 SF3A3Q12874 501 aaKnown RBP eCLIP15.42■□□□□ 0.061e-10■■■■□ 22.2
MED16-210ENST00000606248 AGGF1Q8N302 714 aaeCLIP14.6□□□□□ -0.074e-10■■■■■ 33.3
MED16-210ENST00000606248 TIA1P31483 386 aaKnown RBP eCLIP13.34□□□□□ -0.271e-9■■□□□ 11.5
MED16-210ENST00000606248 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.031e-9■■□□□ 11.7
MED16-210ENST00000606248 PABPC4Q13310 644 aaKnown RBP eCLIP15.36■□□□□ 0.052e-9■■■□□ 15
MED16-210ENST00000606248 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.214e-9■■■□□ 19
MED16-210ENST00000606248 SAFBQ15424 915 aaKnown RBP eCLIP15.97■□□□□ 0.151e-8■■■□□ 15.6
MED16-210ENST00000606248 RBM5P52756 815 aaKnown RBP eCLIP15.25■□□□□ 0.032e-8■■■■■ 28.4
MED16-210ENST00000606248 RBFOX2O43251 390 aaKnown RBP eCLIP11.62□□□□□ -0.552e-8■■■■■ 29.1
MED16-210ENST00000606248 SF3B4Q15427 424 aaKnown RBP eCLIP13.47□□□□□ -0.253e-8■■■■□ 21.2
MED16-210ENST00000606248 EFTUD2Q15029 972 aaKnown RBP eCLIP14.81□□□□□ -0.044e-8■■■■■ 42.6
MED16-210ENST00000606248 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.27□□□□□ -0.124e-8■■■■■ 30.1
MED16-210ENST00000606248 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.64□□□□□ -0.075e-8■■■□□ 15.9
MED16-210ENST00000606248 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.246e-8■■■□□ 18
MED16-210ENST00000606248 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.34■□□□□ 0.056e-8■■■■■ 117.5
MED16-210ENST00000606248 EIF3DO15371 548 aaKnown RBP eCLIP14.99□□□□□ -0.016e-8■□□□□ 10.9
MED16-210ENST00000606248 PCBP2Q15366 365 aaKnown RBP eCLIP13.61□□□□□ -0.237e-8■■■■■ 44.8
MED16-210ENST00000606248 RPS3P23396 243 aaKnown RBP eCLIP13.47□□□□□ -0.258e-8■■■□□ 16.5
MED16-210ENST00000606248 NCBP2P52298 156 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■■■■■ 38.5
MED16-210ENST00000606248 SF3B1O75533 1304 aaKnown RBP eCLIP14.24□□□□□ -0.131e-7■■■■■ 120.1
MED16-210ENST00000606248 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.78□□□□□ -0.21e-7■■■■■ 35.3
MED16-210ENST00000606248 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.621e-7■■■■■ 35.6
MED16-210ENST00000606248 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■■□ 21.2
MED16-210ENST00000606248 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■■■■■ 49.8
MED16-210ENST00000606248 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.48■□□□□ 0.072e-7■■■■■ 29.5
MED16-210ENST00000606248 ILF3Q12906 894 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■■■□ 25.6
MED16-210ENST00000606248 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.733e-7■■□□□ 13.2
MED16-210ENST00000606248 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.86□□□□□ -0.033e-7■■□□□ 14
MED16-210ENST00000606248 GTF2F1P35269 517 aaKnown RBP eCLIP16.38■□□□□ 0.213e-7■■■■■ 38.3
MED16-210ENST00000606248 TAF15Q92804 592 aaKnown RBP eCLIP11.76□□□□□ -0.534e-7■■■■□ 22.2
MED16-210ENST00000606248 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.354e-7■■■■■ 34.6
MED16-210ENST00000606248 PRPF4O43172 522 aaKnown RBP eCLIP14.62□□□□□ -0.074e-7■■■■■ 27.5
MED16-210ENST00000606248 EWSR1Q01844 656 aaKnown RBP eCLIP12.05□□□□□ -0.484e-7■■■■■ 33.2
MED16-210ENST00000606248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.76e-7■■■■□ 25.6
MED16-210ENST00000606248 PCBP1Q15365 356 aaKnown RBP eCLIP13.84□□□□□ -0.196e-7■■■□□ 15.8
MED16-210ENST00000606248 RBM15Q96T37 977 aaKnown RBP eCLIP14.83□□□□□ -0.036e-7■■■■□ 26.3
MED16-210ENST00000606248 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.31□□□□□ -0.127e-7■■□□□ 13
MED16-210ENST00000606248 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.52□□□□□ -0.257e-7■■■■■ 27.4
MED16-210ENST00000606248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.667e-7■■■□□ 14.9
MED16-210ENST00000606248 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.99□□□□□ -0.017e-7■■■■■ 50.8
MED16-210ENST00000606248 SFPQP23246 707 aaKnown RBP eCLIP16.17■□□□□ 0.188e-7■■■■□ 25.8
MED16-210ENST00000606248 DDX6P26196 483 aaKnown RBP eCLIP12.94□□□□□ -0.348e-7■■■■■ 33.8
MED16-210ENST00000606248 HNRNPKP61978 463 aaKnown RBP eCLIP12.28□□□□□ -0.449e-7■■■■□ 22.4
MED16-210ENST00000606248 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.52□□□□□ -0.241e-6■■■■□ 25.3
MED16-210ENST00000606248 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■■□□ 17.5
MED16-210ENST00000606248 SRSF9Q13242 221 aaKnown RBP eCLIP10.51□□□□□ -0.731e-6■■□□□ 12.9
MED16-210ENST00000606248 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■□□ 14.9
MED16-210ENST00000606248 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■■■■□ 25.8
MED16-210ENST00000606248 NKRFO15226 690 aaKnown RBP eCLIP15.77■□□□□ 0.121e-6■■□□□ 14.2
MED16-210ENST00000606248 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.51□□□□□ -0.092e-6■■■■■ 163.7
MED16-210ENST00000606248 BCCIPQ9P287 314 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■□□□ 11.9
MED16-210ENST00000606248 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.162e-6■■■□□ 18.3
MED16-210ENST00000606248 SMNDC1O75940 238 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■■□ 25.6
MED16-210ENST00000606248 GPKOWQ92917 476 aaPredicted RBP eCLIP15.83■□□□□ 0.122e-6■■■■□ 20.4
MED16-210ENST00000606248 SRSF7Q16629 238 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■□□□ 11.8
MED16-210ENST00000606248 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.252e-6■■■■□ 24
MED16-210ENST00000606248 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.982e-6■■■□□ 17.8
MED16-210ENST00000606248 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.4□□□□□ -0.12e-6■■■□□ 18.3
MED16-210ENST00000606248 CDC40O60508 579 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■■■□□ 16.3
MED16-210ENST00000606248 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■■■□ 22.2
MED16-210ENST00000606248 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.283e-6■■■■□ 26.7
MED16-210ENST00000606248 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.64■□□□□ 0.093e-6■■■■■ 27.6
MED16-210ENST00000606248 AARSP49588 968 aaKnown RBP eCLIP15.43■□□□□ 0.063e-6■■■■■ 61.8
MED16-210ENST00000606248 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.32□□□□□ -0.283e-6■■■□□ 17.5
MED16-210ENST00000606248 ZRANB2O95218 330 aaKnown RBP eCLIP15.89■□□□□ 0.133e-6■■■■■ 30.1
MED16-210ENST00000606248 METAP2P50579 478 aaKnown RBP eCLIP16.15■□□□□ 0.183e-6■■■■□ 25.7
MED16-210ENST00000606248 TROVE2P10155 538 aaKnown RBP eCLIP14.59□□□□□ -0.074e-6■□□□□ 10.1
MED16-210ENST00000606248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.26■□□□□ 0.515e-6■□□□□ 9.5
MED16-210ENST00000606248 FKBP4Q02790 459 aaKnown RBP eCLIP16.42■□□□□ 0.227e-6■□□□□ 9.9
MED16-210ENST00000606248 AATFQ9NY61 560 aaKnown RBP eCLIP15.81■□□□□ 0.127e-6■■■□□ 14.6
Retrieved 71 of 71 RNA–protein pairs in 41.4 ms