RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	FGD1	P98174	961 aa		5.31	□□□□□ -1.56
KCNMA1-223	ENST00000604624	AKNA	Q7Z591	1439 aa		5.3	□□□□□ -1.56
KCNMA1-223	ENST00000604624	CEP162	Q5TB80	1403 aa		5.3	□□□□□ -1.56
KCNMA1-223	ENST00000604624	ISY1	Q9ULR0	285 aa	Known RBP	5.3	□□□□□ -1.56
KCNMA1-223	ENST00000604624	SAMD9	Q5K651	1589 aa		5.3	□□□□□ -1.56
KCNMA1-223	ENST00000604624	KAT6B	Q8WYB5	2073 aa		5.3	□□□□□ -1.56
KCNMA1-223	ENST00000604624	CARMIL1	Q5VZK9	1371 aa		5.3	□□□□□ -1.56
KCNMA1-223	ENST00000604624	CASC1	Q6TDU7	716 aa		5.29	□□□□□ -1.56
KCNMA1-223	ENST00000604624	NES	P48681	1621 aa		5.29	□□□□□ -1.56
KCNMA1-223	ENST00000604624	WWC1	Q8IX03	1113 aa		5.29	□□□□□ -1.56
KCNMA1-223	ENST00000604624	SYNJ2	O15056	1496 aa		5.29	□□□□□ -1.56
KCNMA1-223	ENST00000604624	ADAMTS12	P58397	1594 aa		5.29	□□□□□ -1.56
KCNMA1-223	ENST00000604624	IRX6	P78412	446 aa	Predicted RBP	5.29	□□□□□ -1.56
KCNMA1-223	ENST00000604624	GAPVD1	Q14C86	1478 aa		5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	ERCC6	Q03468	1493 aa		5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	RRP12	Q5JTH9	1297 aa	Known RBP	5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	FMN1	Q68DA7	1419 aa		5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	STAG3	Q9UJ98	1225 aa		5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	GOLGA6L4	A6NEF3	574 aa		5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	GOLGA2	Q08379	1002 aa		5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	WDR43	Q15061	677 aa	Known RBP eCLIP	5.28	□□□□□ -1.56
KCNMA1-223	ENST00000604624	ESF1	Q9H501	851 aa	Known RBP	5.27	□□□□□ -1.57
KCNMA1-223	ENST00000604624	LAS1L	Q9Y4W2	734 aa	Known RBP	5.27	□□□□□ -1.57
KCNMA1-223	ENST00000604624	ARHGAP35	Q9NRY4	1499 aa		5.27	□□□□□ -1.57
KCNMA1-223	ENST00000604624	RRBP1	Q9P2E9	1410 aa	Known RBP	5.27	□□□□□ -1.57
KCNMA1-223	ENST00000604624	CLIP1	P30622	1438 aa		5.27	□□□□□ -1.57
KCNMA1-223	ENST00000604624	SNAPC4	Q5SXM2	1469 aa		5.27	□□□□□ -1.57
KCNMA1-223	ENST00000604624	CASKIN1	Q8WXD9	1431 aa		5.27	□□□□□ -1.57
KCNMA1-223	ENST00000604624	C14orf37	Q86TY3	774 aa		5.26	□□□□□ -1.57
KCNMA1-223	ENST00000604624	DDRGK1	Q96HY6	314 aa		5.26	□□□□□ -1.57
KCNMA1-223	ENST00000604624	RUSC2	Q8N2Y8	1516 aa		5.26	□□□□□ -1.57
KCNMA1-223	ENST00000604624	FYCO1	Q9BQS8	1478 aa		5.26	□□□□□ -1.57
KCNMA1-223	ENST00000604624	GNL2	Q13823	731 aa	Known RBP	5.26	□□□□□ -1.57
KCNMA1-223	ENST00000604624	STK11IP	Q8N1F8	1099 aa		5.25	□□□□□ -1.57
KCNMA1-223	ENST00000604624	KDM5B	Q9UGL1	1544 aa		5.25	□□□□□ -1.57
KCNMA1-223	ENST00000604624	KCNJ4	P48050	445 aa		5.25	□□□□□ -1.57
KCNMA1-223	ENST00000604624	GRIN2A	Q12879	1464 aa		5.25	□□□□□ -1.57
KCNMA1-223	ENST00000604624	CREBRF	Q8IUR6	639 aa		5.25	□□□□□ -1.57
KCNMA1-223	ENST00000604624	DNAJC5B	Q9UF47	199 aa		5.25	□□□□□ -1.57
KCNMA1-223	ENST00000604624	SENP3	Q9H4L4	574 aa	Predicted RBP	5.25	□□□□□ -1.57
KCNMA1-223	ENST00000604624	UHRF1BP1L	A0JNW5	1464 aa		5.24	□□□□□ -1.57
KCNMA1-223	ENST00000604624	ARAP3	Q8WWN8	1544 aa		5.24	□□□□□ -1.57
KCNMA1-223	ENST00000604624	CHGA	P10645	457 aa	Known RBP	5.24	□□□□□ -1.57
KCNMA1-223	ENST00000604624	TMC1	Q8TDI8	760 aa		5.24	□□□□□ -1.57
KCNMA1-223	ENST00000604624	ARAP1	Q96P48	1450 aa		5.24	□□□□□ -1.57
KCNMA1-223	ENST00000604624	CEP89	Q96ST8	783 aa		5.23	□□□□□ -1.57
KCNMA1-223	ENST00000604624	MIA2	Q96PC5	1412 aa		5.23	□□□□□ -1.57
KCNMA1-223	ENST00000604624	HSP90AB1	P08238	724 aa	Known RBP	5.23	□□□□□ -1.57
KCNMA1-223	ENST00000604624	SPRYD3	Q8NCJ5	442 aa		5.23	□□□□□ -1.57
KCNMA1-223	ENST00000604624	LOC105371045	A0A1W2PR82	267 aa		5.22	□□□□□ -1.57
KCNMA1-223	ENST00000604624	HAP1	P54257	671 aa	Predicted RBP	5.22	□□□□□ -1.57
KCNMA1-223	ENST00000604624	IQGAP2	Q13576	1575 aa		5.22	□□□□□ -1.57
KCNMA1-223	ENST00000604624	SHROOM2	Q13796	1616 aa		5.22	□□□□□ -1.57
KCNMA1-223	ENST00000604624	DISP1	Q96F81	1524 aa		5.22	□□□□□ -1.57
KCNMA1-223	ENST00000604624	CNKSR2	Q8WXI2	1034 aa		5.21	□□□□□ -1.57
KCNMA1-223	ENST00000604624	TCOF1	Q13428	1488 aa	Known RBP	5.21	□□□□□ -1.58
KCNMA1-223	ENST00000604624	CCDC18	Q5T9S5	1454 aa		5.21	□□□□□ -1.58
KCNMA1-223	ENST00000604624	MAP7D2	Q96T17	732 aa		5.21	□□□□□ -1.58
KCNMA1-223	ENST00000604624	FTSJ3	Q8IY81	847 aa	Known RBP	5.21	□□□□□ -1.58
KCNMA1-223	ENST00000604624	RAD54L2	Q9Y4B4	1467 aa		5.21	□□□□□ -1.58
KCNMA1-223	ENST00000604624	GZF1	Q9H116	711 aa	Predicted RBP	5.2	□□□□□ -1.58
KCNMA1-223	ENST00000604624	OS9	Q13438	667 aa	Predicted RBP	5.2	□□□□□ -1.58
KCNMA1-223	ENST00000604624	PLCD4	Q9BRC7	762 aa		5.2	□□□□□ -1.58
KCNMA1-223	ENST00000604624	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
KCNMA1-223	ENST00000604624	SENP3-EIF4A1	A0A087X0R7	540 aa		5.2	□□□□□ -1.58
KCNMA1-223	ENST00000604624	AK7	Q96M32	723 aa		5.2	□□□□□ -1.58
KCNMA1-223	ENST00000604624	CLASP1	Q7Z460	1538 aa		5.2	□□□□□ -1.58
KCNMA1-223	ENST00000604624	ARID3C	A6NKF2	412 aa		5.19	□□□□□ -1.58
KCNMA1-223	ENST00000604624	CCAR2	Q8N163	923 aa	Known RBP	5.19	□□□□□ -1.58
KCNMA1-223	ENST00000604624	USP35	Q9P2H5	1018 aa		5.19	□□□□□ -1.58
KCNMA1-223	ENST00000604624	PES1	O00541	588 aa	Known RBP	5.19	□□□□□ -1.58
KCNMA1-223	ENST00000604624	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.19	□□□□□ -1.58
KCNMA1-223	ENST00000604624	WDR7	Q9Y4E6	1490 aa		5.19	□□□□□ -1.58
KCNMA1-223	ENST00000604624	FBLN2	P98095	1184 aa		5.18	□□□□□ -1.58
KCNMA1-223	ENST00000604624	VSIG10	Q8N0Z9	540 aa		5.18	□□□□□ -1.58
KCNMA1-223	ENST00000604624	ZNF771	Q7L3S4	317 aa	Predicted RBP	5.18	□□□□□ -1.58
KCNMA1-223	ENST00000604624	EIF4G3	O43432	1585 aa	Known RBP	5.18	□□□□□ -1.58
KCNMA1-223	ENST00000604624	TIMELESS	Q9UNS1	1208 aa		5.18	□□□□□ -1.58
KCNMA1-223	ENST00000604624	PPM1G	O15355	546 aa	Predicted RBP	5.17	□□□□□ -1.58
KCNMA1-223	ENST00000604624	ZNF608	Q9ULD9	1512 aa	Predicted RBP	5.17	□□□□□ -1.58
KCNMA1-223	ENST00000604624	RGS3	P49796	1198 aa		5.17	□□□□□ -1.58
KCNMA1-223	ENST00000604624	HTATSF1	O43719	755 aa	Known RBP	5.17	□□□□□ -1.58
KCNMA1-223	ENST00000604624	TIAM1	Q13009	1591 aa		5.17	□□□□□ -1.58
KCNMA1-223	ENST00000604624	ZNF777	Q9ULD5	760 aa	Predicted RBP	5.17	□□□□□ -1.58
KCNMA1-223	ENST00000604624	RASSF8	Q8NHQ8	419 aa		5.17	□□□□□ -1.58
KCNMA1-223	ENST00000604624	HSP90B1	P14625	803 aa	Known RBP	5.16	□□□□□ -1.58
KCNMA1-223	ENST00000604624	KIF21A	Q7Z4S6	1674 aa		5.16	□□□□□ -1.58
KCNMA1-223	ENST00000604624	TDRD9	Q8NDG6	1382 aa	Known RBP	5.16	□□□□□ -1.58
KCNMA1-223	ENST00000604624	VPS53	Q5VIR6	699 aa		5.16	□□□□□ -1.58
KCNMA1-223	ENST00000604624	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
KCNMA1-223	ENST00000604624	HMMR	O75330	724 aa		5.15	□□□□□ -1.58
KCNMA1-223	ENST00000604624	TPM4	P67936	248 aa		5.15	□□□□□ -1.58
KCNMA1-223	ENST00000604624	TPM3	P06753	285 aa		5.15	□□□□□ -1.58
KCNMA1-223	ENST00000604624	CARMIL2	Q6F5E8	1435 aa		5.15	□□□□□ -1.58
KCNMA1-223	ENST00000604624	LRRC9	Q6ZRR7	1453 aa		5.15	□□□□□ -1.59
KCNMA1-223	ENST00000604624	KIAA0556	O60303	1618 aa		5.15	□□□□□ -1.59
KCNMA1-223	ENST00000604624	DHX37	Q8IY37	1157 aa	Known RBP	5.15	□□□□□ -1.59
KCNMA1-223	ENST00000604624	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ZNF526	Q8TF50	670 aa	Predicted RBP	5.15	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ABCA8	O94911	1581 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms