RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 NISCHQ9Y2I1 1504 aa7.77□□□□□ -1.17
KCNMA1-223ENST00000604624 PELP1Q8IZL8 1130 aaKnown RBP6.85□□□□□ -1.31
KCNMA1-223ENST00000604624 MYO15BQ96JP2 1530 aa6.81□□□□□ -1.32
KCNMA1-223ENST00000604624 CCDC180Q9P1Z9 1646 aa6.81□□□□□ -1.32
KCNMA1-223ENST00000604624 DCAF1Q9Y4B6 1507 aa6.79□□□□□ -1.32
KCNMA1-223ENST00000604624 MYT1Q01538 1121 aa6.71□□□□□ -1.34
KCNMA1-223ENST00000604624 ERICH6Q7L0X2 663 aa6.66□□□□□ -1.34
KCNMA1-223ENST00000604624 ZCCHC6Q5VYS8 1495 aaKnown RBP6.62□□□□□ -1.35
KCNMA1-223ENST00000604624 DCAF8L2P0C7V8 631 aa6.51□□□□□ -1.37
KCNMA1-223ENST00000604624 CCER1Q8TC90 406 aaPredicted RBP6.49□□□□□ -1.37
KCNMA1-223ENST00000604624 SHROOM4Q9ULL8 1493 aa6.46□□□□□ -1.37
KCNMA1-223ENST00000604624 EHMT2Q96KQ7 1210 aa6.38□□□□□ -1.39
KCNMA1-223ENST00000604624 NACADO15069 1562 aa6.35□□□□□ -1.39
KCNMA1-223ENST00000604624 YTHDC1Q96MU7 727 aaKnown RBP6.3□□□□□ -1.4
KCNMA1-223ENST00000604624 DAXXQ9UER7 740 aaPredicted RBP6.29□□□□□ -1.4
KCNMA1-223ENST00000604624 TTBK1Q5TCY1 1321 aaPredicted RBP6.25□□□□□ -1.41
KCNMA1-223ENST00000604624 CENPBP07199 599 aaPredicted RBP6.22□□□□□ -1.41
KCNMA1-223ENST00000604624 NEFLP07196 543 aa6.21□□□□□ -1.42
KCNMA1-223ENST00000604624 RB1CC1Q8TDY2 1594 aa6.18□□□□□ -1.42
KCNMA1-223ENST00000604624 APLP2Q06481 763 aa6.17□□□□□ -1.42
KCNMA1-223ENST00000604624 RANGAP1P46060 587 aaPredicted RBP6.13□□□□□ -1.43
KCNMA1-223ENST00000604624 SUPT5HO00267 1087 aaKnown RBP6.11□□□□□ -1.43
KCNMA1-223ENST00000604624 PEG3Q9GZU2 1588 aa6.11□□□□□ -1.43
KCNMA1-223ENST00000604624 ZNF316A6NFI3 1004 aaPredicted RBP6.1□□□□□ -1.43
KCNMA1-223ENST00000604624 PCGF6Q9BYE7 350 aa6.09□□□□□ -1.43
KCNMA1-223ENST00000604624 ABCC9O60706 1549 aa6.08□□□□□ -1.44
KCNMA1-223ENST00000604624 RTL5Q5HYW3 569 aaPredicted RBP6.08□□□□□ -1.44
KCNMA1-223ENST00000604624 FAM9AQ8IZU1 332 aaPredicted RBP6.06□□□□□ -1.44
KCNMA1-223ENST00000604624 CLSPNQ9HAW4 1339 aa6.03□□□□□ -1.44
KCNMA1-223ENST00000604624 BAZ1AQ9NRL2 1556 aaPredicted RBP6.02□□□□□ -1.45
KCNMA1-223ENST00000604624 EIF5BO60841 1220 aaKnown RBP6.01□□□□□ -1.45
KCNMA1-223ENST00000604624 RSF1Q96T23 1441 aaPredicted RBP5.99□□□□□ -1.45
KCNMA1-223ENST00000604624 BICRAQ9NZM4 1560 aa5.99□□□□□ -1.45
KCNMA1-223ENST00000604624 CNGB1Q14028 1251 aaPredicted RBP5.98□□□□□ -1.45
KCNMA1-223ENST00000604624 ATP1B4Q9UN42 357 aaPredicted RBP5.98□□□□□ -1.45
KCNMA1-223ENST00000604624 NCAPD3P42695 1498 aa5.97□□□□□ -1.45
KCNMA1-223ENST00000604624 POLR3GLQ9BT43 218 aa5.95□□□□□ -1.46
KCNMA1-223ENST00000604624 BCL11AQ9H165 835 aa5.94□□□□□ -1.46
KCNMA1-223ENST00000604624 HMGXB3Q12766 1538 aa5.94□□□□□ -1.46
KCNMA1-223ENST00000604624 CHIC1Q5VXU3 224 aa5.94□□□□□ -1.46
KCNMA1-223ENST00000604624 SLC4A1APQ9BWU0 796 aaKnown RBP5.92□□□□□ -1.46
KCNMA1-223ENST00000604624 GLIPR1L2Q4G1C9 344 aa5.91□□□□□ -1.46
KCNMA1-223ENST00000604624 SMARCA2P51531 1590 aa5.89□□□□□ -1.47
KCNMA1-223ENST00000604624 TOP2AP11388 1531 aaKnown RBP5.86□□□□□ -1.47
KCNMA1-223ENST00000604624 SLC24A1O60721 1099 aa5.86□□□□□ -1.47
KCNMA1-223ENST00000604624 ATAD2BQ9ULI0 1458 aa5.85□□□□□ -1.47
KCNMA1-223ENST00000604624 EIF4G1Q04637 1599 aaKnown RBP5.85□□□□□ -1.47
KCNMA1-223ENST00000604624 MROH2BQ7Z745 1585 aa5.85□□□□□ -1.47
KCNMA1-223ENST00000604624 CECR2Q9BXF3 1484 aa5.85□□□□□ -1.47
KCNMA1-223ENST00000604624 MYT1LQ9UL68 1186 aa5.84□□□□□ -1.47
KCNMA1-223ENST00000604624 SCRIBQ14160 1630 aa5.84□□□□□ -1.47
KCNMA1-223ENST00000604624 SMARCA4P51532 1647 aa5.83□□□□□ -1.48
KCNMA1-223ENST00000604624 ZEB1P37275 1124 aaPredicted RBP5.81□□□□□ -1.48
KCNMA1-223ENST00000604624 ANP32BQ92688 251 aaKnown RBP5.81□□□□□ -1.48
KCNMA1-223ENST00000604624 ZBTB47Q9UFB7 747 aaPredicted RBP5.81□□□□□ -1.48
KCNMA1-223ENST00000604624 AMER1Q5JTC6 1135 aaPredicted RBP5.78□□□□□ -1.48
KCNMA1-223ENST00000604624 ARXQ96QS3 562 aa5.77□□□□□ -1.49
KCNMA1-223ENST00000604624 CDK11BP21127 795 aaKnown RBP5.77□□□□□ -1.49
KCNMA1-223ENST00000604624 CDK11AQ9UQ88 783 aaPredicted RBP5.77□□□□□ -1.49
KCNMA1-223ENST00000604624 EEA1Q15075 1411 aa5.77□□□□□ -1.49
KCNMA1-223ENST00000604624 CFTRP13569 1480 aa5.76□□□□□ -1.49
KCNMA1-223ENST00000604624 BAZ1BQ9UIG0 1483 aaKnown RBP5.75□□□□□ -1.49
KCNMA1-223ENST00000604624 HSP90AA1P07900 732 aaKnown RBP5.74□□□□□ -1.49
KCNMA1-223ENST00000604624 NCBP3Q53F19 620 aaKnown RBP5.74□□□□□ -1.49
KCNMA1-223ENST00000604624 BCANQ96GW7 911 aa5.73□□□□□ -1.49
KCNMA1-223ENST00000604624 PPARGC1BQ86YN6 1023 aaKnown RBP5.71□□□□□ -1.5
KCNMA1-223ENST00000604624 ITGAEP38570 1179 aa5.7□□□□□ -1.5
KCNMA1-223ENST00000604624 CANXP27824 592 aaKnown RBP5.69□□□□□ -1.5
KCNMA1-223ENST00000604624 NPM2Q86SE8 214 aaKnown RBP5.69□□□□□ -1.5
KCNMA1-223ENST00000604624 TULP1O00294 542 aaPredicted RBP5.68□□□□□ -1.5
KCNMA1-223ENST00000604624 TNNT2P45379 298 aaPredicted RBP5.68□□□□□ -1.5
KCNMA1-223ENST00000604624 UBTFP17480 764 aaKnown RBP5.67□□□□□ -1.5
KCNMA1-223ENST00000604624 CCDC88BA6NC98 1476 aa5.67□□□□□ -1.5
KCNMA1-223ENST00000604624 ANP32AP39687 249 aaKnown RBP5.67□□□□□ -1.5
KCNMA1-223ENST00000604624 CADPSQ9ULU8 1353 aa5.66□□□□□ -1.5
KCNMA1-223ENST00000604624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.65□□□□□ -1.5
KCNMA1-223ENST00000604624 HNRNPUL2Q1KMD3 747 aaKnown RBP5.65□□□□□ -1.5
KCNMA1-223ENST00000604624 ABCC8Q09428 1581 aa5.65□□□□□ -1.51
KCNMA1-223ENST00000604624 NBR1Q14596 966 aa5.64□□□□□ -1.51
KCNMA1-223ENST00000604624 WDR97A6NE52 1622 aa5.62□□□□□ -1.51
KCNMA1-223ENST00000604624 LAMC3Q9Y6N6 1575 aa5.6□□□□□ -1.51
KCNMA1-223ENST00000604624 WRNQ14191 1432 aaPredicted RBP eCLIP5.59□□□□□ -1.51
KCNMA1-223ENST00000604624 UNC13AQ9UPW8 1703 aa5.59□□□□□ -1.51
KCNMA1-223ENST00000604624 PRXQ9BXM0 1461 aa5.58□□□□□ -1.52
KCNMA1-223ENST00000604624 DNTTIP2Q5QJE6 756 aaKnown RBP5.58□□□□□ -1.52
KCNMA1-223ENST00000604624 NEFMP07197 916 aa5.57□□□□□ -1.52
KCNMA1-223ENST00000604624 UPF2Q9HAU5 1272 aaKnown RBP5.57□□□□□ -1.52
KCNMA1-223ENST00000604624 HRCP23327 699 aa5.57□□□□□ -1.52
KCNMA1-223ENST00000604624 TRIM44Q96DX7 344 aaPredicted RBP5.57□□□□□ -1.52
KCNMA1-223ENST00000604624 WIZO95785 1651 aa5.57□□□□□ -1.52
KCNMA1-223ENST00000604624 ERICH3Q5RHP9 1530 aa5.56□□□□□ -1.52
KCNMA1-223ENST00000604624 BIVM-ERCC5R4GMW8 1640 aa5.56□□□□□ -1.52
KCNMA1-223ENST00000604624 GTF3C3Q9Y5Q9 886 aa5.56□□□□□ -1.52
KCNMA1-223ENST00000604624 TOP2BQ02880 1626 aa5.56□□□□□ -1.52
KCNMA1-223ENST00000604624 TPRNQ4KMQ1 711 aa5.55□□□□□ -1.52
KCNMA1-223ENST00000604624 DIEXFQ68CQ4 756 aaKnown RBP5.55□□□□□ -1.52
KCNMA1-223ENST00000604624 ABCA10Q8WWZ4 1543 aa5.55□□□□□ -1.52
KCNMA1-223ENST00000604624 TRIM41Q8WV44 630 aa5.54□□□□□ -1.52
KCNMA1-223ENST00000604624 PRM3Q9NNZ6 103 aa5.54□□□□□ -1.52
KCNMA1-223ENST00000604624 PDS5BQ9NTI5 1447 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms