RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 FAM69CQ0P6D2 419 aa12.3□□□□□ -0.44
HCG18-248ENST00000602861 GSE1Q14687 1217 aa12.3□□□□□ -0.44
HCG18-248ENST00000602861 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
HCG18-248ENST00000602861 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
HCG18-248ENST00000602861 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
HCG18-248ENST00000602861 BCANQ96GW7 911 aa12.26□□□□□ -0.45
HCG18-248ENST00000602861 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
HCG18-248ENST00000602861 NUBP1P53384 320 aa12.25□□□□□ -0.45
HCG18-248ENST00000602861 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
HCG18-248ENST00000602861 PTPRGP23470 1445 aa12.24□□□□□ -0.45
HCG18-248ENST00000602861 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
HCG18-248ENST00000602861 TTBK1Q5TCY1 1321 aaPredicted RBP12.24□□□□□ -0.45
HCG18-248ENST00000602861 CARMIL2Q6F5E8 1435 aa12.22□□□□□ -0.45
HCG18-248ENST00000602861 KDM6BO15054 1643 aa12.22□□□□□ -0.45
HCG18-248ENST00000602861 IQGAP2Q13576 1575 aa12.22□□□□□ -0.45
HCG18-248ENST00000602861 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
HCG18-248ENST00000602861 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
HCG18-248ENST00000602861 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
HCG18-248ENST00000602861 ABCC2Q92887 1545 aa12.2□□□□□ -0.46
HCG18-248ENST00000602861 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
HCG18-248ENST00000602861 EEA1Q15075 1411 aa12.19□□□□□ -0.46
HCG18-248ENST00000602861 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
HCG18-248ENST00000602861 CEP162Q5TB80 1403 aa12.17□□□□□ -0.46
HCG18-248ENST00000602861 ASXL2Q76L83 1435 aa12.17□□□□□ -0.46
HCG18-248ENST00000602861 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
HCG18-248ENST00000602861 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
HCG18-248ENST00000602861 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
HCG18-248ENST00000602861 PLB1Q6P1J6 1458 aa12.15□□□□□ -0.46
HCG18-248ENST00000602861 UACAQ9BZF9 1416 aa12.15□□□□□ -0.46
HCG18-248ENST00000602861 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
HCG18-248ENST00000602861 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
HCG18-248ENST00000602861 DISP1Q96F81 1524 aa12.15□□□□□ -0.46
HCG18-248ENST00000602861 UHRF1BP1LA0JNW5 1464 aa12.14□□□□□ -0.47
HCG18-248ENST00000602861 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
HCG18-248ENST00000602861 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
HCG18-248ENST00000602861 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
HCG18-248ENST00000602861 GLI2P10070 1586 aa12.12□□□□□ -0.47
HCG18-248ENST00000602861 UGGT2Q9NYU1 1516 aa12.11□□□□□ -0.47
HCG18-248ENST00000602861 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
HCG18-248ENST00000602861 KIF21BO75037 1637 aa12.09□□□□□ -0.47
HCG18-248ENST00000602861 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
HCG18-248ENST00000602861 KDM5BQ9UGL1 1544 aa12.09□□□□□ -0.47
HCG18-248ENST00000602861 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
HCG18-248ENST00000602861 EPRSP07814 1512 aaKnown RBP12.08□□□□□ -0.48
HCG18-248ENST00000602861 PPRC1Q5VV67 1664 aaKnown RBP12.08□□□□□ -0.48
HCG18-248ENST00000602861 ZCCHC11Q5TAX3 1644 aaKnown RBP12.08□□□□□ -0.48
HCG18-248ENST00000602861 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
HCG18-248ENST00000602861 CCER1Q8TC90 406 aaPredicted RBP12.06□□□□□ -0.48
HCG18-248ENST00000602861 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
HCG18-248ENST00000602861 MAP3K4Q9Y6R4 1608 aa12.05□□□□□ -0.48
HCG18-248ENST00000602861 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
HCG18-248ENST00000602861 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
HCG18-248ENST00000602861 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
HCG18-248ENST00000602861 ADGRL1O94910 1474 aa12.03□□□□□ -0.48
HCG18-248ENST00000602861 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
HCG18-248ENST00000602861 CTTNBP2Q8WZ74 1663 aa12.03□□□□□ -0.48
HCG18-248ENST00000602861 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.48
HCG18-248ENST00000602861 STK25O00506 426 aa12.02□□□□□ -0.49
HCG18-248ENST00000602861 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
HCG18-248ENST00000602861 PRKCSHP14314 528 aaPredicted RBP11.99□□□□□ -0.49
HCG18-248ENST00000602861 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
HCG18-248ENST00000602861 PRXQ9BXM0 1461 aa11.99□□□□□ -0.49
HCG18-248ENST00000602861 ABCA8O94911 1581 aa11.99□□□□□ -0.49
HCG18-248ENST00000602861 PYGBP11216 843 aa11.97□□□□□ -0.49
HCG18-248ENST00000602861 ACIN1Q9UKV3 1341 aaKnown RBP11.96□□□□□ -0.49
HCG18-248ENST00000602861 CD109Q6YHK3 1445 aa11.95□□□□□ -0.5
HCG18-248ENST00000602861 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
HCG18-248ENST00000602861 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
HCG18-248ENST00000602861 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
HCG18-248ENST00000602861 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
HCG18-248ENST00000602861 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
HCG18-248ENST00000602861 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
HCG18-248ENST00000602861 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
HCG18-248ENST00000602861 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.93□□□□□ -0.5
HCG18-248ENST00000602861 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
HCG18-248ENST00000602861 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
HCG18-248ENST00000602861 DIEXFQ68CQ4 756 aaKnown RBP11.92□□□□□ -0.5
HCG18-248ENST00000602861 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
HCG18-248ENST00000602861 CLIP1P30622 1438 aa11.92□□□□□ -0.5
HCG18-248ENST00000602861 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
HCG18-248ENST00000602861 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
HCG18-248ENST00000602861 VPS8Q8N3P4 1428 aa11.91□□□□□ -0.5
HCG18-248ENST00000602861 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
HCG18-248ENST00000602861 HECW2Q9P2P5 1572 aa11.89□□□□□ -0.51
HCG18-248ENST00000602861 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
HCG18-248ENST00000602861 ATP10BO94823 1461 aa11.88□□□□□ -0.51
HCG18-248ENST00000602861 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
HCG18-248ENST00000602861 SAMD9Q5K651 1589 aa11.87□□□□□ -0.51
HCG18-248ENST00000602861 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
HCG18-248ENST00000602861 RYDENQ9NUL5 291 aaKnown RBP11.86□□□□□ -0.51
HCG18-248ENST00000602861 NBR1Q14596 966 aa11.85□□□□□ -0.51
HCG18-248ENST00000602861 ARAP3Q8WWN8 1544 aa11.85□□□□□ -0.51
HCG18-248ENST00000602861 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
HCG18-248ENST00000602861 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
HCG18-248ENST00000602861 ABCA9Q8IUA7 1624 aa11.84□□□□□ -0.51
HCG18-248ENST00000602861 RAPGEF6Q8TEU7 1601 aa11.84□□□□□ -0.51
HCG18-248ENST00000602861 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
HCG18-248ENST00000602861 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
HCG18-248ENST00000602861 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
HCG18-248ENST00000602861 FHOD3Q2V2M9 1422 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms