RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 C11orf95C9JLR9 678 aaPredicted RBP21.19■□□□□ 0.98
IRF3-219ENST00000597636 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
IRF3-219ENST00000597636 DENND4BO75064 1496 aaPredicted RBP21.16■□□□□ 0.98
IRF3-219ENST00000597636 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
IRF3-219ENST00000597636 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.97
IRF3-219ENST00000597636 L3MBTL2Q969R5 705 aa21.13■□□□□ 0.97
IRF3-219ENST00000597636 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
IRF3-219ENST00000597636 NBR1Q14596 966 aa21.12■□□□□ 0.97
IRF3-219ENST00000597636 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
IRF3-219ENST00000597636 IQGAP2Q13576 1575 aa21.11■□□□□ 0.97
IRF3-219ENST00000597636 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
IRF3-219ENST00000597636 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
IRF3-219ENST00000597636 SUPT6HQ7KZ85 1726 aaKnown RBP21.1■□□□□ 0.97
IRF3-219ENST00000597636 CHIC2Q9UKJ5 165 aa21.08■□□□□ 0.97
IRF3-219ENST00000597636 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.97
IRF3-219ENST00000597636 EHBP1L1Q8N3D4 1523 aa21.08■□□□□ 0.96
IRF3-219ENST00000597636 MPHOSPH9Q99550 1183 aa21.08■□□□□ 0.96
IRF3-219ENST00000597636 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
IRF3-219ENST00000597636 UGGT2Q9NYU1 1516 aa21.06■□□□□ 0.96
IRF3-219ENST00000597636 AKNAQ7Z591 1439 aa21.06■□□□□ 0.96
IRF3-219ENST00000597636 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
IRF3-219ENST00000597636 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
IRF3-219ENST00000597636 IPO9Q96P70 1041 aaKnown RBP21.05■□□□□ 0.96
IRF3-219ENST00000597636 KIAA0586Q9BVV6 1533 aa21.05■□□□□ 0.96
IRF3-219ENST00000597636 RNF123Q5XPI4 1314 aa21.05■□□□□ 0.96
IRF3-219ENST00000597636 ARHGEF11O15085 1522 aa21.05■□□□□ 0.96
IRF3-219ENST00000597636 ANP32AP39687 249 aaKnown RBP21.04■□□□□ 0.96
IRF3-219ENST00000597636 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
IRF3-219ENST00000597636 TCOF1Q13428 1488 aaKnown RBP21.04■□□□□ 0.96
IRF3-219ENST00000597636 SAMD9Q5K651 1589 aa21.04■□□□□ 0.96
IRF3-219ENST00000597636 CCDC136Q96JN2 1154 aa21.03■□□□□ 0.96
IRF3-219ENST00000597636 NBPF8Q3BBV2 869 aa21.02■□□□□ 0.96
IRF3-219ENST00000597636 NUDCQ9Y266 331 aa21.02■□□□□ 0.96
IRF3-219ENST00000597636 SPATA31E1Q6ZUB1 1445 aa21.01■□□□□ 0.95
IRF3-219ENST00000597636 KDM6BO15054 1643 aa21.01■□□□□ 0.95
IRF3-219ENST00000597636 FOXD1Q16676 465 aa20.99■□□□□ 0.95
IRF3-219ENST00000597636 ZBTB47Q9UFB7 747 aaPredicted RBP20.99■□□□□ 0.95
IRF3-219ENST00000597636 RPRD2Q5VT52 1461 aaKnown RBP20.97■□□□□ 0.95
IRF3-219ENST00000597636 RTL5Q5HYW3 569 aaPredicted RBP20.97■□□□□ 0.95
IRF3-219ENST00000597636 MAGI3Q5TCQ9 1506 aa20.97■□□□□ 0.95
IRF3-219ENST00000597636 DISP1Q96F81 1524 aa20.97■□□□□ 0.95
IRF3-219ENST00000597636 ANKRD30BQ9BXX2 1392 aa20.96■□□□□ 0.95
IRF3-219ENST00000597636 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
IRF3-219ENST00000597636 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
IRF3-219ENST00000597636 NUP160Q12769 1436 aa20.92■□□□□ 0.94
IRF3-219ENST00000597636 POLR1AO95602 1720 aaPredicted RBP20.92■□□□□ 0.94
IRF3-219ENST00000597636 CHD1O14646 1710 aa20.91■□□□□ 0.94
IRF3-219ENST00000597636 CDK13Q14004 1512 aaKnown RBP20.91■□□□□ 0.94
IRF3-219ENST00000597636 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
IRF3-219ENST00000597636 PLB1Q6P1J6 1458 aa20.89■□□□□ 0.94
IRF3-219ENST00000597636 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.93
IRF3-219ENST00000597636 KIAA0556O60303 1618 aa20.87■□□□□ 0.93
IRF3-219ENST00000597636 PRKCSHP14314 528 aaPredicted RBP20.87■□□□□ 0.93
IRF3-219ENST00000597636 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
IRF3-219ENST00000597636 PNISRQ8TF01 805 aaKnown RBP20.83■□□□□ 0.93
IRF3-219ENST00000597636 ROCK1Q13464 1354 aa20.83■□□□□ 0.93
IRF3-219ENST00000597636 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.92
IRF3-219ENST00000597636 SLC4A1APQ9BWU0 796 aaKnown RBP20.82■□□□□ 0.92
IRF3-219ENST00000597636 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
IRF3-219ENST00000597636 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
IRF3-219ENST00000597636 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
IRF3-219ENST00000597636 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
IRF3-219ENST00000597636 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
IRF3-219ENST00000597636 POLR3GLQ9BT43 218 aa20.78■□□□□ 0.92
IRF3-219ENST00000597636 DAPK1P53355 1430 aa20.78■□□□□ 0.92
IRF3-219ENST00000597636 USP47Q96K76 1375 aa20.78■□□□□ 0.92
IRF3-219ENST00000597636 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
IRF3-219ENST00000597636 PTPRGP23470 1445 aa20.76■□□□□ 0.91
IRF3-219ENST00000597636 SENP3-EIF4A1A0A087X0R7 540 aa20.76■□□□□ 0.91
IRF3-219ENST00000597636 NUP153P49790 1475 aaKnown RBP20.76■□□□□ 0.91
IRF3-219ENST00000597636 USP35Q9P2H5 1018 aa20.75■□□□□ 0.91
IRF3-219ENST00000597636 BCORL1Q5H9F3 1711 aa20.75■□□□□ 0.91
IRF3-219ENST00000597636 ABCC5O15440 1437 aa20.74■□□□□ 0.91
IRF3-219ENST00000597636 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
IRF3-219ENST00000597636 NPM2Q86SE8 214 aaKnown RBP20.74■□□□□ 0.91
IRF3-219ENST00000597636 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
IRF3-219ENST00000597636 ZNF777Q9ULD5 760 aaPredicted RBP20.74■□□□□ 0.91
IRF3-219ENST00000597636 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
IRF3-219ENST00000597636 LRPPRCP42704 1394 aaKnown RBP20.73■□□□□ 0.91
IRF3-219ENST00000597636 PDE4AP27815 886 aa20.72■□□□□ 0.91
IRF3-219ENST00000597636 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
IRF3-219ENST00000597636 EXOC6Q8TAG9 804 aa20.71■□□□□ 0.91
IRF3-219ENST00000597636 ZNF644Q9H582 1327 aaPredicted RBP20.71■□□□□ 0.91
IRF3-219ENST00000597636 NEFMP07197 916 aa20.7■□□□□ 0.9
IRF3-219ENST00000597636 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
IRF3-219ENST00000597636 BACH2Q9BYV9 841 aa20.69■□□□□ 0.9
IRF3-219ENST00000597636 SALL2Q9Y467 1007 aaPredicted RBP20.69■□□□□ 0.9
IRF3-219ENST00000597636 DNMT1P26358 1616 aaKnown RBP20.69■□□□□ 0.9
IRF3-219ENST00000597636 MS4A1P11836 297 aa20.69■□□□□ 0.9
IRF3-219ENST00000597636 PZPP20742 1482 aa20.68■□□□□ 0.9
IRF3-219ENST00000597636 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
IRF3-219ENST00000597636 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
IRF3-219ENST00000597636 KIF15Q9NS87 1388 aa20.67■□□□□ 0.9
IRF3-219ENST00000597636 BRD4O60885 1362 aaPredicted RBP20.67■□□□□ 0.9
IRF3-219ENST00000597636 PLEKHD1A6NEE1 506 aa20.67■□□□□ 0.9
IRF3-219ENST00000597636 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
IRF3-219ENST00000597636 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
IRF3-219ENST00000597636 KDM5CP41229 1560 aa20.66■□□□□ 0.9
IRF3-219ENST00000597636 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
IRF3-219ENST00000597636 MYBBP1AQ9BQG0 1328 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms