RNA–Protein interactions for RNA: ENST00000597529.1

EMP3-207, Transcript of epithelial membrane protein 3, humanhuman

TSL 2

Gene EMP3, Length 437 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-207ENST00000597529 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
EMP3-207ENST00000597529 ATP10BO94823 1461 aa17.4■□□□□ 0.38
EMP3-207ENST00000597529 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
EMP3-207ENST00000597529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
EMP3-207ENST00000597529 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
EMP3-207ENST00000597529 EFCAB5A4FU69 1503 aa17.35■□□□□ 0.37
EMP3-207ENST00000597529 HECW1Q76N89 1606 aa17.33■□□□□ 0.37
EMP3-207ENST00000597529 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
EMP3-207ENST00000597529 CAMSAP1Q5T5Y3 1602 aa17.32■□□□□ 0.36
EMP3-207ENST00000597529 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
EMP3-207ENST00000597529 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
EMP3-207ENST00000597529 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
EMP3-207ENST00000597529 TOM1O60784 492 aa17.3■□□□□ 0.36
EMP3-207ENST00000597529 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
EMP3-207ENST00000597529 SETD1AO15047 1707 aaKnown RBP17.29■□□□□ 0.36
EMP3-207ENST00000597529 C3P01024 1663 aa17.28■□□□□ 0.36
EMP3-207ENST00000597529 ATP10AO60312 1499 aa17.26■□□□□ 0.35
EMP3-207ENST00000597529 MAGI2Q86UL8 1455 aa17.24■□□□□ 0.35
EMP3-207ENST00000597529 C9orf84Q5VXU9 1444 aa17.23■□□□□ 0.35
EMP3-207ENST00000597529 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
EMP3-207ENST00000597529 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
EMP3-207ENST00000597529 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
EMP3-207ENST00000597529 SCAPERQ9BY12 1400 aa17.19■□□□□ 0.34
EMP3-207ENST00000597529 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
EMP3-207ENST00000597529 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
EMP3-207ENST00000597529 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
EMP3-207ENST00000597529 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
EMP3-207ENST00000597529 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
EMP3-207ENST00000597529 CTTNBP2Q8WZ74 1663 aa17.12■□□□□ 0.33
EMP3-207ENST00000597529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■□□□□ 10.6
EMP3-207ENST00000597529 PKD2Q13563 968 aa17.11■□□□□ 0.33
EMP3-207ENST00000597529 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
EMP3-207ENST00000597529 TCOF1Q13428 1488 aaKnown RBP17.07■□□□□ 0.32
EMP3-207ENST00000597529 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
EMP3-207ENST00000597529 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
EMP3-207ENST00000597529 PLEKHD1A6NEE1 506 aa17.06■□□□□ 0.32
EMP3-207ENST00000597529 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
EMP3-207ENST00000597529 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
EMP3-207ENST00000597529 RAPGEF6Q8TEU7 1601 aa17.05■□□□□ 0.32
EMP3-207ENST00000597529 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
EMP3-207ENST00000597529 CPS1P31327 1500 aa17.03■□□□□ 0.32
EMP3-207ENST00000597529 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
EMP3-207ENST00000597529 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.31
EMP3-207ENST00000597529 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
EMP3-207ENST00000597529 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
EMP3-207ENST00000597529 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
EMP3-207ENST00000597529 ZMYM3Q14202 1370 aa16.98■□□□□ 0.31
EMP3-207ENST00000597529 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
EMP3-207ENST00000597529 NPATQ14207 1427 aa16.97■□□□□ 0.31
EMP3-207ENST00000597529 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
EMP3-207ENST00000597529 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
EMP3-207ENST00000597529 PLCH2O75038 1416 aa16.95■□□□□ 0.3
EMP3-207ENST00000597529 ZNF142P52746 1687 aaPredicted RBP16.93■□□□□ 0.3
EMP3-207ENST00000597529 CNTLNQ9NXG0 1405 aa16.93■□□□□ 0.3
EMP3-207ENST00000597529 VWDEQ8N2E2 1590 aa16.93■□□□□ 0.3
EMP3-207ENST00000597529 AGLP35573 1532 aa16.92■□□□□ 0.3
EMP3-207ENST00000597529 NEURL4Q96JN8 1562 aa16.92■□□□□ 0.3
EMP3-207ENST00000597529 EFCAB2Q5VUJ9 269 aa16.91■□□□□ 0.3
EMP3-207ENST00000597529 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
EMP3-207ENST00000597529 KDM5CP41229 1560 aa16.88■□□□□ 0.29
EMP3-207ENST00000597529 REREQ9P2R6 1566 aa16.88■□□□□ 0.29
EMP3-207ENST00000597529 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
EMP3-207ENST00000597529 CLTCQ00610 1675 aaKnown RBP16.85■□□□□ 0.29
EMP3-207ENST00000597529 STRCP1A6NGW2 1772 aa16.85■□□□□ 0.29
EMP3-207ENST00000597529 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
EMP3-207ENST00000597529 MROH2AA6NES4 1674 aa16.84■□□□□ 0.29
EMP3-207ENST00000597529 POLR1AO95602 1720 aaPredicted RBP16.84■□□□□ 0.29
EMP3-207ENST00000597529 CDK13Q14004 1512 aaKnown RBP16.83■□□□□ 0.28
EMP3-207ENST00000597529 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
EMP3-207ENST00000597529 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
EMP3-207ENST00000597529 A2ML1A8K2U0 1454 aa16.8■□□□□ 0.28
EMP3-207ENST00000597529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■□□□□ 8.8
EMP3-207ENST00000597529 ARHGAP5Q13017 1502 aa16.79■□□□□ 0.28
EMP3-207ENST00000597529 MLH3Q9UHC1 1453 aa16.79■□□□□ 0.28
EMP3-207ENST00000597529 MYO5CQ9NQX4 1742 aa16.79■□□□□ 0.28
EMP3-207ENST00000597529 ANKLE2Q86XL3 938 aa16.77■□□□□ 0.28
EMP3-207ENST00000597529 GGT6Q6P531 493 aa16.76■□□□□ 0.27
EMP3-207ENST00000597529 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
EMP3-207ENST00000597529 SETBP1Q9Y6X0 1596 aa16.76■□□□□ 0.27
EMP3-207ENST00000597529 FBXO31Q5XUX0 539 aaPredicted RBP16.74■□□□□ 0.27
EMP3-207ENST00000597529 KIDINS220Q9ULH0 1771 aa16.73■□□□□ 0.27
EMP3-207ENST00000597529 KIF14Q15058 1648 aa16.73■□□□□ 0.27
EMP3-207ENST00000597529 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
EMP3-207ENST00000597529 PRXQ9BXM0 1461 aa16.71■□□□□ 0.27
EMP3-207ENST00000597529 RXRBP28702 533 aa16.69■□□□□ 0.26
EMP3-207ENST00000597529 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
EMP3-207ENST00000597529 ABCC1P33527 1531 aa16.69■□□□□ 0.26
EMP3-207ENST00000597529 FAM135BQ49AJ0 1406 aa16.69■□□□□ 0.26
EMP3-207ENST00000597529 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
EMP3-207ENST00000597529 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
EMP3-207ENST00000597529 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
EMP3-207ENST00000597529 SYNMO15061 1565 aa16.67■□□□□ 0.26
EMP3-207ENST00000597529 LRP6O75581 1613 aa16.67■□□□□ 0.26
EMP3-207ENST00000597529 ROBO1Q9Y6N7 1651 aa16.66■□□□□ 0.26
EMP3-207ENST00000597529 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
EMP3-207ENST00000597529 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
EMP3-207ENST00000597529 XIRP1Q702N8 1843 aaKnown RBP16.65■□□□□ 0.26
EMP3-207ENST00000597529 TNRQ92752 1358 aa16.64■□□□□ 0.26
EMP3-207ENST00000597529 MED14O60244 1454 aa16.63■□□□□ 0.25
EMP3-207ENST00000597529 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms