RNA–Protein interactions for RNA: ENST00000595384.1

SIPA1L3-204, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 5

Gene SIPA1L3, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-204ENST00000595384 HECW1Q76N89 1606 aa18.72■□□□□ 0.59
SIPA1L3-204ENST00000595384 CFAP74Q9C0B2 1584 aa18.7■□□□□ 0.58
SIPA1L3-204ENST00000595384 MAGI2Q86UL8 1455 aa18.7■□□□□ 0.58
SIPA1L3-204ENST00000595384 HSPA1LP34931 641 aa18.69■□□□□ 0.58
SIPA1L3-204ENST00000595384 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
SIPA1L3-204ENST00000595384 NCOA1Q15788 1441 aa18.67■□□□□ 0.58
SIPA1L3-204ENST00000595384 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
SIPA1L3-204ENST00000595384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
SIPA1L3-204ENST00000595384 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
SIPA1L3-204ENST00000595384 C3P01024 1663 aa18.65■□□□□ 0.58
SIPA1L3-204ENST00000595384 ATP10AO60312 1499 aa18.64■□□□□ 0.57
SIPA1L3-204ENST00000595384 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
SIPA1L3-204ENST00000595384 C9orf84Q5VXU9 1444 aa18.63■□□□□ 0.57
SIPA1L3-204ENST00000595384 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
SIPA1L3-204ENST00000595384 RAPGEF6Q8TEU7 1601 aa18.61■□□□□ 0.57
SIPA1L3-204ENST00000595384 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
SIPA1L3-204ENST00000595384 CAMSAP1Q5T5Y3 1602 aa18.59■□□□□ 0.57
SIPA1L3-204ENST00000595384 PIP4K2BP78356 416 aa18.58■□□□□ 0.56
SIPA1L3-204ENST00000595384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.57■□□□□ 0.56
SIPA1L3-204ENST00000595384 SCAPERQ9BY12 1400 aa18.55■□□□□ 0.56
SIPA1L3-204ENST00000595384 NCKAP5LQ9HCH0 1330 aa18.54■□□□□ 0.56
SIPA1L3-204ENST00000595384 TRAPPC8Q9Y2L5 1435 aa18.54■□□□□ 0.56
SIPA1L3-204ENST00000595384 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.55
SIPA1L3-204ENST00000595384 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
SIPA1L3-204ENST00000595384 TOM1O60784 492 aa18.45■□□□□ 0.54
SIPA1L3-204ENST00000595384 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
SIPA1L3-204ENST00000595384 SAMD9Q5K651 1589 aa18.43■□□□□ 0.54
SIPA1L3-204ENST00000595384 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
SIPA1L3-204ENST00000595384 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
SIPA1L3-204ENST00000595384 RGS17Q9UGC6 210 aaPredicted RBP18.43■□□□□ 0.54
SIPA1L3-204ENST00000595384 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
SIPA1L3-204ENST00000595384 PLCH2O75038 1416 aa18.4■□□□□ 0.54
SIPA1L3-204ENST00000595384 REREQ9P2R6 1566 aa18.39■□□□□ 0.53
SIPA1L3-204ENST00000595384 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
SIPA1L3-204ENST00000595384 PKD2Q13563 968 aa18.38■□□□□ 0.53
SIPA1L3-204ENST00000595384 PLA2R1Q13018 1463 aa18.38■□□□□ 0.53
SIPA1L3-204ENST00000595384 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
SIPA1L3-204ENST00000595384 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
SIPA1L3-204ENST00000595384 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
SIPA1L3-204ENST00000595384 AGLP35573 1532 aa18.37■□□□□ 0.53
SIPA1L3-204ENST00000595384 KDM5CP41229 1560 aa18.37■□□□□ 0.53
SIPA1L3-204ENST00000595384 ALKQ9UM73 1620 aa18.37■□□□□ 0.53
SIPA1L3-204ENST00000595384 ZNF142P52746 1687 aaPredicted RBP18.37■□□□□ 0.53
SIPA1L3-204ENST00000595384 NPATQ14207 1427 aa18.36■□□□□ 0.53
SIPA1L3-204ENST00000595384 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
SIPA1L3-204ENST00000595384 MYO3AQ8NEV4 1616 aa18.35■□□□□ 0.53
SIPA1L3-204ENST00000595384 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
SIPA1L3-204ENST00000595384 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
SIPA1L3-204ENST00000595384 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
SIPA1L3-204ENST00000595384 CNTLNQ9NXG0 1405 aa18.34■□□□□ 0.53
SIPA1L3-204ENST00000595384 CPS1P31327 1500 aa18.33■□□□□ 0.53
SIPA1L3-204ENST00000595384 SETD1AO15047 1707 aaKnown RBP18.32■□□□□ 0.52
SIPA1L3-204ENST00000595384 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
SIPA1L3-204ENST00000595384 CEP170BQ9Y4F5 1589 aaPredicted RBP18.32■□□□□ 0.52
SIPA1L3-204ENST00000595384 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
SIPA1L3-204ENST00000595384 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
SIPA1L3-204ENST00000595384 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
SIPA1L3-204ENST00000595384 POTEAQ6S8J7 498 aa18.28■□□□□ 0.52
SIPA1L3-204ENST00000595384 CDK13Q14004 1512 aaKnown RBP18.27■□□□□ 0.51
SIPA1L3-204ENST00000595384 ZMYM3Q14202 1370 aa18.27■□□□□ 0.51
SIPA1L3-204ENST00000595384 POLR1AO95602 1720 aaPredicted RBP18.24■□□□□ 0.51
SIPA1L3-204ENST00000595384 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
SIPA1L3-204ENST00000595384 CLTCQ00610 1675 aaKnown RBP18.23■□□□□ 0.51
SIPA1L3-204ENST00000595384 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
SIPA1L3-204ENST00000595384 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
SIPA1L3-204ENST00000595384 NEURL4Q96JN8 1562 aa18.21■□□□□ 0.51
SIPA1L3-204ENST00000595384 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
SIPA1L3-204ENST00000595384 KIF14Q15058 1648 aa18.2■□□□□ 0.5
SIPA1L3-204ENST00000595384 KIDINS220Q9ULH0 1771 aa18.19■□□□□ 0.5
SIPA1L3-204ENST00000595384 DNMT1P26358 1616 aaKnown RBP18.18■□□□□ 0.5
SIPA1L3-204ENST00000595384 RNF17Q9BXT8 1623 aaKnown RBP18.14■□□□□ 0.49
SIPA1L3-204ENST00000595384 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.49
SIPA1L3-204ENST00000595384 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
SIPA1L3-204ENST00000595384 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
SIPA1L3-204ENST00000595384 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
SIPA1L3-204ENST00000595384 ABCC1P33527 1531 aa18.1■□□□□ 0.49
SIPA1L3-204ENST00000595384 UPF1Q92900 1129 aaKnown RBP eCLIP18.09■□□□□ 0.49
SIPA1L3-204ENST00000595384 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.49
SIPA1L3-204ENST00000595384 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
SIPA1L3-204ENST00000595384 SYNMO15061 1565 aa18.04■□□□□ 0.48
SIPA1L3-204ENST00000595384 PREX2Q70Z35 1606 aa18.02■□□□□ 0.48
SIPA1L3-204ENST00000595384 NPHP4O75161 1426 aaPredicted RBP18.02■□□□□ 0.48
SIPA1L3-204ENST00000595384 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
SIPA1L3-204ENST00000595384 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
SIPA1L3-204ENST00000595384 IQGAP1P46940 1657 aa18.01■□□□□ 0.47
SIPA1L3-204ENST00000595384 SAMD9LQ8IVG5 1584 aa18■□□□□ 0.47
SIPA1L3-204ENST00000595384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18■□□□□ 0.47
SIPA1L3-204ENST00000595384 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
SIPA1L3-204ENST00000595384 GGT6Q6P531 493 aa17.99■□□□□ 0.47
SIPA1L3-204ENST00000595384 PLXNC1O60486 1568 aa17.99■□□□□ 0.47
SIPA1L3-204ENST00000595384 DEPDC5O75140 1603 aa17.98■□□□□ 0.47
SIPA1L3-204ENST00000595384 MED14O60244 1454 aa17.98■□□□□ 0.47
SIPA1L3-204ENST00000595384 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
SIPA1L3-204ENST00000595384 XIRP1Q702N8 1843 aaKnown RBP17.97■□□□□ 0.47
SIPA1L3-204ENST00000595384 TNRQ92752 1358 aa17.95■□□□□ 0.46
SIPA1L3-204ENST00000595384 CLIP1P30622 1438 aa17.95■□□□□ 0.46
SIPA1L3-204ENST00000595384 FBXO31Q5XUX0 539 aaPredicted RBP17.93■□□□□ 0.46
SIPA1L3-204ENST00000595384 TRIM52Q96A61 297 aa17.93■□□□□ 0.46
SIPA1L3-204ENST00000595384 A2MP01023 1474 aa17.93■□□□□ 0.46
SIPA1L3-204ENST00000595384 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms