RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 CFAP74Q9C0B2 1584 aa26.89■■□□□ 1.9
AP3D1-211ENST00000591650 PHLDB1Q86UU1 1377 aa26.89■■□□□ 1.9
AP3D1-211ENST00000591650 TEX14Q8IWB6 1497 aa26.87■■□□□ 1.89
AP3D1-211ENST00000591650 MYOM3Q5VTT5 1437 aa26.86■■□□□ 1.89
AP3D1-211ENST00000591650 FANCAO15360 1455 aa26.85■■□□□ 1.89
AP3D1-211ENST00000591650 SAMD9LQ8IVG5 1584 aa26.84■■□□□ 1.89
AP3D1-211ENST00000591650 NEO1Q92859 1461 aa26.81■■□□□ 1.88
AP3D1-211ENST00000591650 ABCC1P33527 1531 aa26.79■■□□□ 1.88
AP3D1-211ENST00000591650 FGD6Q6ZV73 1430 aa26.77■■□□□ 1.88
AP3D1-211ENST00000591650 PTPN23Q9H3S7 1636 aa26.77■■□□□ 1.88
AP3D1-211ENST00000591650 CFDP1Q9UEE9 299 aaPredicted RBP26.75■■□□□ 1.87
AP3D1-211ENST00000591650 CAMSAP2Q08AD1 1489 aa26.75■■□□□ 1.87
AP3D1-211ENST00000591650 AKNAQ7Z591 1439 aa26.75■■□□□ 1.87
AP3D1-211ENST00000591650 MIA2Q96PC5 1412 aa26.74■■□□□ 1.87
AP3D1-211ENST00000591650 ADGRL1O94910 1474 aa26.74■■□□□ 1.87
AP3D1-211ENST00000591650 SYCP2Q9BX26 1530 aa26.74■■□□□ 1.87
AP3D1-211ENST00000591650 EFCAB2Q5VUJ9 269 aa26.73■■□□□ 1.87
AP3D1-211ENST00000591650 COL17A1Q9UMD9 1497 aaPredicted RBP26.71■■□□□ 1.87
AP3D1-211ENST00000591650 KDM6BO15054 1643 aa26.7■■□□□ 1.86
AP3D1-211ENST00000591650 RICTORQ6R327 1708 aa26.69■■□□□ 1.86
AP3D1-211ENST00000591650 FRMPD1Q5SYB0 1578 aa26.69■■□□□ 1.86
AP3D1-211ENST00000591650 ARHGEF12Q9NZN5 1544 aa26.69■■□□□ 1.86
AP3D1-211ENST00000591650 TCOF1Q13428 1488 aaKnown RBP26.69■■□□□ 1.86
AP3D1-211ENST00000591650 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
AP3D1-211ENST00000591650 ZNF777Q9ULD5 760 aaPredicted RBP26.69■■□□□ 1.86
AP3D1-211ENST00000591650 PLEKHH2Q8IVE3 1493 aa26.66■■□□□ 1.86
AP3D1-211ENST00000591650 SCAPERQ9BY12 1400 aa26.65■■□□□ 1.86
AP3D1-211ENST00000591650 POGZQ7Z3K3 1410 aa26.63■■□□□ 1.85
AP3D1-211ENST00000591650 RRBP1Q9P2E9 1410 aaKnown RBP26.63■■□□□ 1.85
AP3D1-211ENST00000591650 ARHGEF5Q12774 1597 aa26.62■■□□□ 1.85
AP3D1-211ENST00000591650 KIAA1107Q9UPP5 1409 aa26.62■■□□□ 1.85
AP3D1-211ENST00000591650 CROCC2H7BZ55 1655 aa26.62■■□□□ 1.85
AP3D1-211ENST00000591650 DENND4BO75064 1496 aaPredicted RBP26.61■■□□□ 1.85
AP3D1-211ENST00000591650 MBD5Q9P267 1494 aa26.61■■□□□ 1.85
AP3D1-211ENST00000591650 TRAPPC8Q9Y2L5 1435 aa26.59■■□□□ 1.85
AP3D1-211ENST00000591650 DNMT1P26358 1616 aaKnown RBP26.59■■□□□ 1.85
AP3D1-211ENST00000591650 KDM5CP41229 1560 aa26.59■■□□□ 1.85
AP3D1-211ENST00000591650 ZNF518AQ6AHZ1 1483 aa26.57■■□□□ 1.84
AP3D1-211ENST00000591650 RAPGEF3O95398 923 aa26.56■■□□□ 1.84
AP3D1-211ENST00000591650 CCDC141Q6ZP82 1450 aa26.56■■□□□ 1.84
AP3D1-211ENST00000591650 ZMYM4Q5VZL5 1548 aa26.56■■□□□ 1.84
AP3D1-211ENST00000591650 HNRNPMP52272 730 aaKnown RBP eCLIP26.55■■□□□ 1.842e-9■■■■■ 59.6
AP3D1-211ENST00000591650 HECW2Q9P2P5 1572 aa26.53■■□□□ 1.84
AP3D1-211ENST00000591650 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
AP3D1-211ENST00000591650 INO80Q9ULG1 1556 aaPredicted RBP26.52■■□□□ 1.84
AP3D1-211ENST00000591650 DAPK1P53355 1430 aa26.5■■□□□ 1.83
AP3D1-211ENST00000591650 ZFYVE16Q7Z3T8 1539 aa26.5■■□□□ 1.83
AP3D1-211ENST00000591650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.49■■□□□ 1.83
AP3D1-211ENST00000591650 AFAP1Q8N556 730 aa26.48■■□□□ 1.83
AP3D1-211ENST00000591650 ABCC5O15440 1437 aa26.48■■□□□ 1.83
AP3D1-211ENST00000591650 KIDINS220Q9ULH0 1771 aa26.48■■□□□ 1.83
AP3D1-211ENST00000591650 MAST1Q9Y2H9 1570 aa26.47■■□□□ 1.83
AP3D1-211ENST00000591650 SHANK2Q9UPX8 1470 aa26.47■■□□□ 1.83
AP3D1-211ENST00000591650 ATP7AQ04656 1500 aa26.46■■□□□ 1.83
AP3D1-211ENST00000591650 ARHGEF40Q8TER5 1519 aa26.46■■□□□ 1.83
AP3D1-211ENST00000591650 ADGBQ8N7X0 1667 aa26.45■■□□□ 1.83
AP3D1-211ENST00000591650 ABCA6Q8N139 1617 aa26.45■■□□□ 1.83
AP3D1-211ENST00000591650 MLH3Q9UHC1 1453 aa26.43■■□□□ 1.82
AP3D1-211ENST00000591650 C9orf84Q5VXU9 1444 aa26.43■■□□□ 1.82
AP3D1-211ENST00000591650 DIP2CQ9Y2E4 1556 aa26.42■■□□□ 1.82
AP3D1-211ENST00000591650 PTPRKQ15262 1439 aa26.41■■□□□ 1.82
AP3D1-211ENST00000591650 YEATS2Q9ULM3 1422 aa26.4■■□□□ 1.82
AP3D1-211ENST00000591650 PLXNC1O60486 1568 aa26.39■■□□□ 1.82
AP3D1-211ENST00000591650 MAGI2Q86UL8 1455 aa26.39■■□□□ 1.81
AP3D1-211ENST00000591650 SPAG9O60271 1321 aaKnown RBP26.38■■□□□ 1.81
AP3D1-211ENST00000591650 RSPH4AQ5TD94 716 aa26.38■■□□□ 1.81
AP3D1-211ENST00000591650 RTEL1-TNFRSF6BF6WH68 1400 aa26.35■■□□□ 1.81
AP3D1-211ENST00000591650 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
AP3D1-211ENST00000591650 ITGAEP38570 1179 aa26.33■■□□□ 1.81
AP3D1-211ENST00000591650 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.81
AP3D1-211ENST00000591650 TSPY4P0CV99 314 aa26.31■■□□□ 1.8
AP3D1-211ENST00000591650 TSPY10P0CW01 314 aa26.31■■□□□ 1.8
AP3D1-211ENST00000591650 CHIC2Q9UKJ5 165 aa26.3■■□□□ 1.8
AP3D1-211ENST00000591650 MYT1LQ9UL68 1186 aa26.3■■□□□ 1.8
AP3D1-211ENST00000591650 REREQ9P2R6 1566 aa26.28■■□□□ 1.8
AP3D1-211ENST00000591650 GCC2Q8IWJ2 1684 aa26.26■■□□□ 1.79
AP3D1-211ENST00000591650 ATP10AO60312 1499 aa26.26■■□□□ 1.79
AP3D1-211ENST00000591650 NCOA1Q15788 1441 aa26.25■■□□□ 1.79
AP3D1-211ENST00000591650 ANKRD30AQ9BXX3 1397 aa26.24■■□□□ 1.79
AP3D1-211ENST00000591650 ROCK1Q13464 1354 aa26.23■■□□□ 1.79
AP3D1-211ENST00000591650 KIF15Q9NS87 1388 aa26.23■■□□□ 1.79
AP3D1-211ENST00000591650 A2MP01023 1474 aa26.23■■□□□ 1.79
AP3D1-211ENST00000591650 DUOX2Q9NRD8 1548 aa26.22■■□□□ 1.79
AP3D1-211ENST00000591650 EIF2AK4Q9P2K8 1649 aaKnown RBP26.18■■□□□ 1.78
AP3D1-211ENST00000591650 BCORL1Q5H9F3 1711 aa26.18■■□□□ 1.78
AP3D1-211ENST00000591650 RRP7BPQ9NSQ0 103 aa26.17■■□□□ 1.78
AP3D1-211ENST00000591650 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
AP3D1-211ENST00000591650 HFM1A2PYH4 1435 aa26.15■■□□□ 1.78
AP3D1-211ENST00000591650 AGLP35573 1532 aa26.14■■□□□ 1.78
AP3D1-211ENST00000591650 DHX29Q7Z478 1369 aaKnown RBP26.14■■□□□ 1.78
AP3D1-211ENST00000591650 ERBINQ96RT1 1412 aa26.14■■□□□ 1.77
AP3D1-211ENST00000591650 NAIPQ13075 1403 aa26.13■■□□□ 1.77
AP3D1-211ENST00000591650 RNF17Q9BXT8 1623 aaKnown RBP26.11■■□□□ 1.77
AP3D1-211ENST00000591650 ANKRD50Q9ULJ7 1429 aa26.1■■□□□ 1.77
AP3D1-211ENST00000591650 DEPDC5O75140 1603 aa26.09■■□□□ 1.77
AP3D1-211ENST00000591650 MROH1Q8NDA8 1641 aa26.08■■□□□ 1.77
AP3D1-211ENST00000591650 ARID4BQ4LE39 1312 aaPredicted RBP26.07■■□□□ 1.76
AP3D1-211ENST00000591650 UNC13BO14795 1591 aa26.05■■□□□ 1.76
AP3D1-211ENST00000591650 PRDM15P57071 1507 aaPredicted RBP26.03■■□□□ 1.76
AP3D1-211ENST00000591650 FER1L4A9Z1Z3 1794 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms