RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.15■■□□□ 1.34e-9■□□□□ 10.2
DDX39A-211ENST00000590239 FAM69CQ0P6D2 419 aa23.15■■□□□ 1.3
DDX39A-211ENST00000590239 CD109Q6YHK3 1445 aa23.15■■□□□ 1.3
DDX39A-211ENST00000590239 TCOF1Q13428 1488 aaKnown RBP23.14■■□□□ 1.29
DDX39A-211ENST00000590239 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
DDX39A-211ENST00000590239 PTPN23Q9H3S7 1636 aa23.13■■□□□ 1.29
DDX39A-211ENST00000590239 ARHGAP5Q13017 1502 aa23.13■■□□□ 1.29
DDX39A-211ENST00000590239 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
DDX39A-211ENST00000590239 EFCAB2Q5VUJ9 269 aa23.11■■□□□ 1.29
DDX39A-211ENST00000590239 FAM50AQ14320 339 aaKnown RBP23.08■■□□□ 1.29
DDX39A-211ENST00000590239 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.28
DDX39A-211ENST00000590239 CAMSAP2Q08AD1 1489 aa23.07■■□□□ 1.28
DDX39A-211ENST00000590239 FANCAO15360 1455 aa23.06■■□□□ 1.28
DDX39A-211ENST00000590239 ZNF777Q9ULD5 760 aaPredicted RBP23.06■■□□□ 1.28
DDX39A-211ENST00000590239 ZNF644Q9H582 1327 aaPredicted RBP23.06■■□□□ 1.28
DDX39A-211ENST00000590239 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
DDX39A-211ENST00000590239 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
DDX39A-211ENST00000590239 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
DDX39A-211ENST00000590239 KIAA1107Q9UPP5 1409 aa23.03■■□□□ 1.28
DDX39A-211ENST00000590239 NEO1Q92859 1461 aa23.02■■□□□ 1.28
DDX39A-211ENST00000590239 TEX14Q8IWB6 1497 aa22.99■■□□□ 1.27
DDX39A-211ENST00000590239 ILDR1Q86SU0 546 aaPredicted RBP22.98■■□□□ 1.27
DDX39A-211ENST00000590239 AKNAQ7Z591 1439 aa22.98■■□□□ 1.27
DDX39A-211ENST00000590239 ABCC1P33527 1531 aa22.98■■□□□ 1.27
DDX39A-211ENST00000590239 RSPH4AQ5TD94 716 aa22.97■■□□□ 1.27
DDX39A-211ENST00000590239 MBD5Q9P267 1494 aa22.97■■□□□ 1.27
DDX39A-211ENST00000590239 ARHGEF5Q12774 1597 aa22.97■■□□□ 1.27
DDX39A-211ENST00000590239 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
DDX39A-211ENST00000590239 PPRC1Q5VV67 1664 aaKnown RBP22.96■■□□□ 1.27
DDX39A-211ENST00000590239 DNMT1P26358 1616 aaKnown RBP22.95■■□□□ 1.26
DDX39A-211ENST00000590239 SYCP2Q9BX26 1530 aa22.95■■□□□ 1.26
DDX39A-211ENST00000590239 ADGRL1O94910 1474 aa22.94■■□□□ 1.26
DDX39A-211ENST00000590239 DAPK1P53355 1430 aa22.94■■□□□ 1.26
DDX39A-211ENST00000590239 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.264e-15■■■■□ 20.6
DDX39A-211ENST00000590239 ABCC5O15440 1437 aa22.93■■□□□ 1.26
DDX39A-211ENST00000590239 ARHGEF12Q9NZN5 1544 aa22.92■■□□□ 1.26
DDX39A-211ENST00000590239 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
DDX39A-211ENST00000590239 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
DDX39A-211ENST00000590239 SCAPERQ9BY12 1400 aa22.91■■□□□ 1.26
DDX39A-211ENST00000590239 ITGAEP38570 1179 aa22.91■■□□□ 1.26
DDX39A-211ENST00000590239 SHANK2Q9UPX8 1470 aa22.89■■□□□ 1.25
DDX39A-211ENST00000590239 PTPRKQ15262 1439 aa22.89■■□□□ 1.25
DDX39A-211ENST00000590239 CROCC2H7BZ55 1655 aa22.87■■□□□ 1.25
DDX39A-211ENST00000590239 TRAPPC8Q9Y2L5 1435 aa22.87■■□□□ 1.25
DDX39A-211ENST00000590239 TSPY4P0CV99 314 aa22.86■■□□□ 1.25
DDX39A-211ENST00000590239 TSPY10P0CW01 314 aa22.86■■□□□ 1.25
DDX39A-211ENST00000590239 DENND4BO75064 1496 aaPredicted RBP22.85■■□□□ 1.25
DDX39A-211ENST00000590239 ROCK1Q13464 1354 aa22.84■■□□□ 1.25
DDX39A-211ENST00000590239 ZNF518AQ6AHZ1 1483 aa22.84■■□□□ 1.25
DDX39A-211ENST00000590239 C9orf84Q5VXU9 1444 aa22.83■■□□□ 1.25
DDX39A-211ENST00000590239 POGZQ7Z3K3 1410 aa22.83■■□□□ 1.25
DDX39A-211ENST00000590239 MAST1Q9Y2H9 1570 aa22.83■■□□□ 1.25
DDX39A-211ENST00000590239 ADGRL2O95490 1459 aa22.81■■□□□ 1.24
DDX39A-211ENST00000590239 AFAP1Q8N556 730 aa22.81■■□□□ 1.24
DDX39A-211ENST00000590239 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
DDX39A-211ENST00000590239 RTEL1-TNFRSF6BF6WH68 1400 aa22.79■■□□□ 1.24
DDX39A-211ENST00000590239 SPAG9O60271 1321 aaKnown RBP22.79■■□□□ 1.24
DDX39A-211ENST00000590239 ANKRD30AQ9BXX3 1397 aa22.78■■□□□ 1.24
DDX39A-211ENST00000590239 ADGBQ8N7X0 1667 aa22.78■■□□□ 1.24
DDX39A-211ENST00000590239 KDM5CP41229 1560 aa22.78■■□□□ 1.24
DDX39A-211ENST00000590239 NCOA1Q15788 1441 aa22.77■■□□□ 1.24
DDX39A-211ENST00000590239 HFM1A2PYH4 1435 aa22.76■■□□□ 1.23
DDX39A-211ENST00000590239 RICTORQ6R327 1708 aa22.76■■□□□ 1.23
DDX39A-211ENST00000590239 RAPGEF3O95398 923 aa22.75■■□□□ 1.23
DDX39A-211ENST00000590239 MLH3Q9UHC1 1453 aa22.74■■□□□ 1.23
DDX39A-211ENST00000590239 INO80Q9ULG1 1556 aaPredicted RBP22.74■■□□□ 1.23
DDX39A-211ENST00000590239 ZFYVE16Q7Z3T8 1539 aa22.73■■□□□ 1.23
DDX39A-211ENST00000590239 FRMPD1Q5SYB0 1578 aa22.73■■□□□ 1.23
DDX39A-211ENST00000590239 NAIPQ13075 1403 aa22.73■■□□□ 1.23
DDX39A-211ENST00000590239 ATP7AQ04656 1500 aa22.72■■□□□ 1.23
DDX39A-211ENST00000590239 ZMYM4Q5VZL5 1548 aa22.72■■□□□ 1.23
DDX39A-211ENST00000590239 PLXNC1O60486 1568 aa22.72■■□□□ 1.23
DDX39A-211ENST00000590239 RRP7BPQ9NSQ0 103 aa22.72■■□□□ 1.23
DDX39A-211ENST00000590239 SETD5Q9C0A6 1442 aa22.72■■□□□ 1.23
DDX39A-211ENST00000590239 COL17A1Q9UMD9 1497 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-211ENST00000590239 HECW2Q9P2P5 1572 aa22.71■■□□□ 1.23
DDX39A-211ENST00000590239 KIF15Q9NS87 1388 aa22.69■■□□□ 1.22
DDX39A-211ENST00000590239 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
DDX39A-211ENST00000590239 MAGI2Q86UL8 1455 aa22.68■■□□□ 1.22
DDX39A-211ENST00000590239 KIDINS220Q9ULH0 1771 aa22.68■■□□□ 1.22
DDX39A-211ENST00000590239 HRCP23327 699 aa22.66■■□□□ 1.22
DDX39A-211ENST00000590239 MYT1LQ9UL68 1186 aa22.66■■□□□ 1.22
DDX39A-211ENST00000590239 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.21
DDX39A-211ENST00000590239 KDM6BO15054 1643 aa22.64■■□□□ 1.21
DDX39A-211ENST00000590239 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
DDX39A-211ENST00000590239 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
DDX39A-211ENST00000590239 ANKRD50Q9ULJ7 1429 aa22.62■■□□□ 1.21
DDX39A-211ENST00000590239 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
DDX39A-211ENST00000590239 ABCA6Q8N139 1617 aa22.59■■□□□ 1.21
DDX39A-211ENST00000590239 DHX29Q7Z478 1369 aaKnown RBP22.59■■□□□ 1.21
DDX39A-211ENST00000590239 YEATS2Q9ULM3 1422 aa22.58■■□□□ 1.21
DDX39A-211ENST00000590239 KDM4FA0A1W2PPD8 638 aa22.58■■□□□ 1.21
DDX39A-211ENST00000590239 DIP2CQ9Y2E4 1556 aa22.58■■□□□ 1.2
DDX39A-211ENST00000590239 A2MP01023 1474 aa22.57■■□□□ 1.2
DDX39A-211ENST00000590239 ATP10AO60312 1499 aa22.54■■□□□ 1.2
DDX39A-211ENST00000590239 ARHGEF40Q8TER5 1519 aa22.54■■□□□ 1.2
DDX39A-211ENST00000590239 REREQ9P2R6 1566 aa22.52■■□□□ 1.2
DDX39A-211ENST00000590239 EIF2AK4Q9P2K8 1649 aaKnown RBP22.51■■□□□ 1.19
DDX39A-211ENST00000590239 BCORL1Q5H9F3 1711 aa22.47■■□□□ 1.19
DDX39A-211ENST00000590239 KIF3BO15066 747 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms