RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 MYOM3Q5VTT5 1437 aa31■■■□□ 2.55
DNMT1-216ENST00000588952 ARHGAP5Q13017 1502 aa30.99■■■□□ 2.55
DNMT1-216ENST00000588952 FANCAO15360 1455 aa30.95■■■□□ 2.55
DNMT1-216ENST00000588952 CFDP1Q9UEE9 299 aaPredicted RBP30.93■■■□□ 2.54
DNMT1-216ENST00000588952 TEX14Q8IWB6 1497 aa30.92■■■□□ 2.54
DNMT1-216ENST00000588952 FGD6Q6ZV73 1430 aa30.91■■■□□ 2.54
DNMT1-216ENST00000588952 SAMD9LQ8IVG5 1584 aa30.91■■■□□ 2.54
DNMT1-216ENST00000588952 EFCAB2Q5VUJ9 269 aa30.9■■■□□ 2.54
DNMT1-216ENST00000588952 CFAP74Q9C0B2 1584 aa30.89■■■□□ 2.54
DNMT1-216ENST00000588952 MIA2Q96PC5 1412 aa30.89■■■□□ 2.53
DNMT1-216ENST00000588952 NEO1Q92859 1461 aa30.89■■■□□ 2.53
DNMT1-216ENST00000588952 ZNF644Q9H582 1327 aaPredicted RBP30.88■■■□□ 2.53
DNMT1-216ENST00000588952 ZNF777Q9ULD5 760 aaPredicted RBP30.87■■■□□ 2.53
DNMT1-216ENST00000588952 AKNAQ7Z591 1439 aa30.87■■■□□ 2.53
DNMT1-216ENST00000588952 PTPN23Q9H3S7 1636 aa30.85■■■□□ 2.53
DNMT1-216ENST00000588952 CAMSAP2Q08AD1 1489 aa30.84■■■□□ 2.53
DNMT1-216ENST00000588952 ABCC1P33527 1531 aa30.83■■■□□ 2.53
DNMT1-216ENST00000588952 TCOF1Q13428 1488 aaKnown RBP30.82■■■□□ 2.52
DNMT1-216ENST00000588952 ARHGEF12Q9NZN5 1544 aa30.81■■■□□ 2.52
DNMT1-216ENST00000588952 ADGRL1O94910 1474 aa30.81■■■□□ 2.52
DNMT1-216ENST00000588952 RRBP1Q9P2E9 1410 aaKnown RBP30.79■■■□□ 2.52
DNMT1-216ENST00000588952 SYCP2Q9BX26 1530 aa30.78■■■□□ 2.52
DNMT1-216ENST00000588952 COL17A1Q9UMD9 1497 aaPredicted RBP30.76■■■□□ 2.52
DNMT1-216ENST00000588952 SCAPERQ9BY12 1400 aa30.76■■■□□ 2.51
DNMT1-216ENST00000588952 PLEKHH2Q8IVE3 1493 aa30.75■■■□□ 2.51
DNMT1-216ENST00000588952 KIAA1107Q9UPP5 1409 aa30.74■■■□□ 2.51
DNMT1-216ENST00000588952 HNRNPMP52272 730 aaKnown RBP eCLIP30.73■■■□□ 2.51
DNMT1-216ENST00000588952 MBD5Q9P267 1494 aa30.73■■■□□ 2.51
DNMT1-216ENST00000588952 TRAPPC8Q9Y2L5 1435 aa30.72■■■□□ 2.51
DNMT1-216ENST00000588952 FAM50AQ14320 339 aaKnown RBP30.71■■■□□ 2.51
DNMT1-216ENST00000588952 FRMPD1Q5SYB0 1578 aa30.7■■■□□ 2.5
DNMT1-216ENST00000588952 DENND4BO75064 1496 aaPredicted RBP30.69■■■□□ 2.5
DNMT1-216ENST00000588952 POGZQ7Z3K3 1410 aa30.68■■■□□ 2.5
DNMT1-216ENST00000588952 RICTORQ6R327 1708 aa30.67■■■□□ 2.5
DNMT1-216ENST00000588952 ARHGEF5Q12774 1597 aa30.66■■■□□ 2.5
DNMT1-216ENST00000588952 KDM6BO15054 1643 aa30.66■■■□□ 2.5
DNMT1-216ENST00000588952 RAPGEF3O95398 923 aa30.66■■■□□ 2.5
DNMT1-216ENST00000588952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.65■■■□□ 2.5
DNMT1-216ENST00000588952 DNMT1P26358 1616 aaKnown RBP30.63■■■□□ 2.49
DNMT1-216ENST00000588952 AFAP1Q8N556 730 aa30.63■■■□□ 2.49
DNMT1-216ENST00000588952 ABCC5O15440 1437 aa30.62■■■□□ 2.49
DNMT1-216ENST00000588952 CCDC141Q6ZP82 1450 aa30.62■■■□□ 2.49
DNMT1-216ENST00000588952 ZNF518AQ6AHZ1 1483 aa30.61■■■□□ 2.49
DNMT1-216ENST00000588952 KDM5CP41229 1560 aa30.6■■■□□ 2.49
DNMT1-216ENST00000588952 DAPK1P53355 1430 aa30.6■■■□□ 2.49
DNMT1-216ENST00000588952 CROCC2H7BZ55 1655 aa30.58■■■□□ 2.49
DNMT1-216ENST00000588952 PTPRKQ15262 1439 aa30.56■■■□□ 2.48
DNMT1-216ENST00000588952 ZMYM4Q5VZL5 1548 aa30.54■■■□□ 2.48
DNMT1-216ENST00000588952 RSPH4AQ5TD94 716 aa30.52■■■□□ 2.48
DNMT1-216ENST00000588952 INO80Q9ULG1 1556 aaPredicted RBP30.51■■■□□ 2.47
DNMT1-216ENST00000588952 SHANK2Q9UPX8 1470 aa30.5■■■□□ 2.47
DNMT1-216ENST00000588952 ITGAEP38570 1179 aa30.5■■■□□ 2.47
DNMT1-216ENST00000588952 ZFYVE16Q7Z3T8 1539 aa30.5■■■□□ 2.47
DNMT1-216ENST00000588952 HECW2Q9P2P5 1572 aa30.49■■■□□ 2.47
DNMT1-216ENST00000588952 MAST1Q9Y2H9 1570 aa30.49■■■□□ 2.47
DNMT1-216ENST00000588952 C9orf84Q5VXU9 1444 aa30.49■■■□□ 2.47
DNMT1-216ENST00000588952 SPAG9O60271 1321 aaKnown RBP30.48■■■□□ 2.47
DNMT1-216ENST00000588952 MLH3Q9UHC1 1453 aa30.48■■■□□ 2.47
DNMT1-216ENST00000588952 KIDINS220Q9ULH0 1771 aa30.48■■■□□ 2.47
DNMT1-216ENST00000588952 ATP7AQ04656 1500 aa30.47■■■□□ 2.47
DNMT1-216ENST00000588952 YEATS2Q9ULM3 1422 aa30.45■■■□□ 2.46
DNMT1-216ENST00000588952 TSPY4P0CV99 314 aa30.44■■■□□ 2.46
DNMT1-216ENST00000588952 TSPY10P0CW01 314 aa30.44■■■□□ 2.46
DNMT1-216ENST00000588952 CHIC2Q9UKJ5 165 aa30.44■■■□□ 2.46
DNMT1-216ENST00000588952 RTEL1-TNFRSF6BF6WH68 1400 aa30.43■■■□□ 2.46
DNMT1-216ENST00000588952 ABCA6Q8N139 1617 aa30.41■■■□□ 2.46
DNMT1-216ENST00000588952 MAGI2Q86UL8 1455 aa30.41■■■□□ 2.46
DNMT1-216ENST00000588952 ADGBQ8N7X0 1667 aa30.39■■■□□ 2.46
DNMT1-216ENST00000588952 ADGRL2O95490 1459 aa30.39■■■□□ 2.46
DNMT1-216ENST00000588952 ARHGEF40Q8TER5 1519 aa30.39■■■□□ 2.46
DNMT1-216ENST00000588952 DIP2CQ9Y2E4 1556 aa30.39■■■□□ 2.46
DNMT1-216ENST00000588952 PLXNC1O60486 1568 aa30.37■■■□□ 2.45
DNMT1-216ENST00000588952 TRIM26Q12899 539 aaPredicted RBP30.37■■■□□ 2.45
DNMT1-216ENST00000588952 MYT1LQ9UL68 1186 aa30.37■■■□□ 2.45
DNMT1-216ENST00000588952 NCOA1Q15788 1441 aa30.34■■■□□ 2.45
DNMT1-216ENST00000588952 ROCK1Q13464 1354 aa30.32■■■□□ 2.44
DNMT1-216ENST00000588952 ANKRD30AQ9BXX3 1397 aa30.31■■■□□ 2.44
DNMT1-216ENST00000588952 RRP7BPQ9NSQ0 103 aa30.3■■■□□ 2.44
DNMT1-216ENST00000588952 KIF15Q9NS87 1388 aa30.29■■■□□ 2.44
DNMT1-216ENST00000588952 ATP10AO60312 1499 aa30.28■■■□□ 2.44
DNMT1-216ENST00000588952 SIGLEC1Q9BZZ2 1709 aa30.27■■■□□ 2.44
DNMT1-216ENST00000588952 A2MP01023 1474 aa30.25■■■□□ 2.43
DNMT1-216ENST00000588952 DUOX2Q9NRD8 1548 aa30.23■■■□□ 2.43
DNMT1-216ENST00000588952 REREQ9P2R6 1566 aa30.23■■■□□ 2.43
DNMT1-216ENST00000588952 NAIPQ13075 1403 aa30.22■■■□□ 2.43
DNMT1-216ENST00000588952 DHX29Q7Z478 1369 aaKnown RBP30.21■■■□□ 2.43
DNMT1-216ENST00000588952 HFM1A2PYH4 1435 aa30.21■■■□□ 2.43
DNMT1-216ENST00000588952 GCC2Q8IWJ2 1684 aa30.2■■■□□ 2.43
DNMT1-216ENST00000588952 ERBINQ96RT1 1412 aa30.14■■■□□ 2.42
DNMT1-216ENST00000588952 ANKRD50Q9ULJ7 1429 aa30.14■■■□□ 2.42
DNMT1-216ENST00000588952 AGLP35573 1532 aa30.12■■■□□ 2.41
DNMT1-216ENST00000588952 PCGF6Q9BYE7 350 aa30.11■■■□□ 2.41
DNMT1-216ENST00000588952 EIF2AK4Q9P2K8 1649 aaKnown RBP30.11■■■□□ 2.41
DNMT1-216ENST00000588952 BCORL1Q5H9F3 1711 aa30.09■■■□□ 2.41
DNMT1-216ENST00000588952 SETD5Q9C0A6 1442 aa30.08■■■□□ 2.41
DNMT1-216ENST00000588952 KIF3BO15066 747 aa30.05■■■□□ 2.4
DNMT1-216ENST00000588952 RNF17Q9BXT8 1623 aaKnown RBP30.04■■■□□ 2.4
DNMT1-216ENST00000588952 MROH1Q8NDA8 1641 aa30.03■■■□□ 2.4
DNMT1-216ENST00000588952 ARID4BQ4LE39 1312 aaPredicted RBP30.02■■■□□ 2.4
DNMT1-216ENST00000588952 RAB3GAP2Q9H2M9 1393 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms