RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NISCHQ9Y2I1 1504 aa47.63■■■■■ 5.22
DNMT1-216ENST00000588952 CCDC180Q9P1Z9 1646 aa42.02■■■■■ 4.32
DNMT1-216ENST00000588952 ABCC9O60706 1549 aa40.56■■■■■ 4.08
DNMT1-216ENST00000588952 ZCCHC6Q5VYS8 1495 aaKnown RBP39.84■■■■□ 3.97
DNMT1-216ENST00000588952 DCAF8L2P0C7V8 631 aa39.49■■■■□ 3.91
DNMT1-216ENST00000588952 DCAF1Q9Y4B6 1507 aa39.4■■■■□ 3.9
DNMT1-216ENST00000588952 NACADO15069 1562 aa39.33■■■■□ 3.89
DNMT1-216ENST00000588952 MYO15BQ96JP2 1530 aa39.3■■■■□ 3.88
DNMT1-216ENST00000588952 RB1CC1Q8TDY2 1594 aa39.22■■■■□ 3.87
DNMT1-216ENST00000588952 SCRIBQ14160 1630 aa38.48■■■■□ 3.75
DNMT1-216ENST00000588952 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
DNMT1-216ENST00000588952 BICRAQ9NZM4 1560 aa38.12■■■■□ 3.69
DNMT1-216ENST00000588952 SHROOM4Q9ULL8 1493 aa38.09■■■■□ 3.69
DNMT1-216ENST00000588952 PABPN1Q86U42 306 aaKnown RBP eCLIP38.02■■■■□ 3.68
DNMT1-216ENST00000588952 CECR2Q9BXF3 1484 aa37.1■■■■□ 3.53
DNMT1-216ENST00000588952 EIF4G1Q04637 1599 aaKnown RBP37.01■■■■□ 3.52
DNMT1-216ENST00000588952 SMARCA4P51532 1647 aa36.84■■■■□ 3.49
DNMT1-216ENST00000588952 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
DNMT1-216ENST00000588952 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
DNMT1-216ENST00000588952 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
DNMT1-216ENST00000588952 DNAJC5BQ9UF47 199 aa36.68■■■■□ 3.46
DNMT1-216ENST00000588952 RSF1Q96T23 1441 aaPredicted RBP36.56■■■■□ 3.44
DNMT1-216ENST00000588952 ATAD2BQ9ULI0 1458 aa36.46■■■■□ 3.43
DNMT1-216ENST00000588952 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
DNMT1-216ENST00000588952 WIZO95785 1651 aa36.41■■■■□ 3.42
DNMT1-216ENST00000588952 SMARCA2P51531 1590 aa36.4■■■■□ 3.42
DNMT1-216ENST00000588952 NCAPD3P42695 1498 aa36.31■■■■□ 3.4
DNMT1-216ENST00000588952 HMGXB3Q12766 1538 aa36.19■■■■□ 3.38
DNMT1-216ENST00000588952 BAZ1BQ9UIG0 1483 aaKnown RBP36.18■■■■□ 3.38
DNMT1-216ENST00000588952 SUPT5HO00267 1087 aaKnown RBP36.1■■■■□ 3.37
DNMT1-216ENST00000588952 TOP2AP11388 1531 aaKnown RBP36.02■■■■□ 3.36
DNMT1-216ENST00000588952 CCDC88BA6NC98 1476 aa35.61■■■■□ 3.29
DNMT1-216ENST00000588952 NESP48681 1621 aa35.33■■■■□ 3.25
DNMT1-216ENST00000588952 CADPSQ9ULU8 1353 aa35.28■■■■□ 3.24
DNMT1-216ENST00000588952 CFTRP13569 1480 aa35.23■■■■□ 3.23
DNMT1-216ENST00000588952 LAMC3Q9Y6N6 1575 aa35.23■■■■□ 3.23
DNMT1-216ENST00000588952 PRDM2Q13029 1718 aa35.01■■■■□ 3.2
DNMT1-216ENST00000588952 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
DNMT1-216ENST00000588952 FANCD2Q9BXW9 1451 aa34.9■■■■□ 3.18
DNMT1-216ENST00000588952 KIF21AQ7Z4S6 1674 aa34.9■■■■□ 3.18
DNMT1-216ENST00000588952 ERCC6Q03468 1493 aa34.84■■■■□ 3.17
DNMT1-216ENST00000588952 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
DNMT1-216ENST00000588952 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
DNMT1-216ENST00000588952 MRC2Q9UBG0 1479 aa34.6■■■■□ 3.13
DNMT1-216ENST00000588952 URB2Q14146 1524 aaKnown RBP34.56■■■■□ 3.12
DNMT1-216ENST00000588952 ABCC8Q09428 1581 aa34.55■■■■□ 3.12
DNMT1-216ENST00000588952 WDR62O43379 1518 aa34.49■■■■□ 3.11
DNMT1-216ENST00000588952 CUX1P39880 1505 aa34.45■■■■□ 3.11
DNMT1-216ENST00000588952 TOPBP1Q92547 1522 aa34.44■■■■□ 3.1
DNMT1-216ENST00000588952 DNMBPQ6XZF7 1577 aa34.44■■■■□ 3.1
DNMT1-216ENST00000588952 WRNQ14191 1432 aaPredicted RBP eCLIP34.41■■■■□ 3.1
DNMT1-216ENST00000588952 SYNJ1O43426 1573 aa34.37■■■■□ 3.09
DNMT1-216ENST00000588952 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
DNMT1-216ENST00000588952 BIVM-ERCC5R4GMW8 1640 aa34.29■■■■□ 3.08
DNMT1-216ENST00000588952 CUX2O14529 1486 aa34.22■■■■□ 3.07
DNMT1-216ENST00000588952 FGD5Q6ZNL6 1462 aa34.2■■■■□ 3.07
DNMT1-216ENST00000588952 POLA1P09884 1462 aaPredicted RBP34.2■■■■□ 3.06
DNMT1-216ENST00000588952 CHIC1Q5VXU3 224 aa34.1■■■■□ 3.05
DNMT1-216ENST00000588952 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
DNMT1-216ENST00000588952 TARBP1Q13395 1621 aaKnown RBP34.03■■■■□ 3.04
DNMT1-216ENST00000588952 SOGA1O94964 1423 aa34.02■■■■□ 3.04
DNMT1-216ENST00000588952 IFT140Q96RY7 1462 aa34.01■■■■□ 3.04
DNMT1-216ENST00000588952 TRIM41Q8WV44 630 aa34.01■■■■□ 3.03
DNMT1-216ENST00000588952 WDR97A6NE52 1622 aa33.92■■■■□ 3.02
DNMT1-216ENST00000588952 ZNF608Q9ULD9 1512 aaPredicted RBP33.89■■■■□ 3.02
DNMT1-216ENST00000588952 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
DNMT1-216ENST00000588952 TDRD9Q8NDG6 1382 aaKnown RBP33.79■■■■□ 3
DNMT1-216ENST00000588952 EIF4G3O43432 1585 aaKnown RBP33.76■■■□□ 2.99
DNMT1-216ENST00000588952 AQRO60306 1485 aaKnown RBP eCLIP33.76■■■□□ 2.992e-7■■■■■ 32.5
DNMT1-216ENST00000588952 ABCA5Q8WWZ7 1642 aa33.72■■■□□ 2.99
DNMT1-216ENST00000588952 GAPVD1Q14C86 1478 aa33.65■■■□□ 2.98
DNMT1-216ENST00000588952 RUSC2Q8N2Y8 1516 aa33.64■■■□□ 2.98
DNMT1-216ENST00000588952 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
DNMT1-216ENST00000588952 PBRM1Q86U86 1689 aa33.57■■■□□ 2.96
DNMT1-216ENST00000588952 GRIN2BQ13224 1484 aa33.54■■■□□ 2.96
DNMT1-216ENST00000588952 ERICH3Q5RHP9 1530 aa33.47■■■□□ 2.95
DNMT1-216ENST00000588952 SNAPC4Q5SXM2 1469 aa33.46■■■□□ 2.95
DNMT1-216ENST00000588952 IGF1RP08069 1367 aa33.45■■■□□ 2.94
DNMT1-216ENST00000588952 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
DNMT1-216ENST00000588952 EEA1Q15075 1411 aa33.37■■■□□ 2.93
DNMT1-216ENST00000588952 FAM9AQ8IZU1 332 aaPredicted RBP33.37■■■□□ 2.93
DNMT1-216ENST00000588952 ADAMTS12P58397 1594 aa33.35■■■□□ 2.93
DNMT1-216ENST00000588952 CUL7Q14999 1698 aa33.29■■■□□ 2.92
DNMT1-216ENST00000588952 CSRNP3Q8WYN3 585 aa33.27■■■□□ 2.92
DNMT1-216ENST00000588952 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
DNMT1-216ENST00000588952 SYNJ2O15056 1496 aa33.25■■■□□ 2.91
DNMT1-216ENST00000588952 CARMIL1Q5VZK9 1371 aa33.23■■■□□ 2.91
DNMT1-216ENST00000588952 CHD1O14646 1710 aa33.21■■■□□ 2.91
DNMT1-216ENST00000588952 PRXQ9BXM0 1461 aa33.19■■■□□ 2.9
DNMT1-216ENST00000588952 FBLN2P98095 1184 aa33.15■■■□□ 2.9
DNMT1-216ENST00000588952 CHMP7Q8WUX9 453 aaPredicted RBP33.14■■■□□ 2.9
DNMT1-216ENST00000588952 GRIN2AQ12879 1464 aa33.13■■■□□ 2.89
DNMT1-216ENST00000588952 RAPGEF2Q9Y4G8 1499 aa33.11■■■□□ 2.89
DNMT1-216ENST00000588952 KIF21BO75037 1637 aa33.06■■■□□ 2.88
DNMT1-216ENST00000588952 CEP170Q5SW79 1584 aa32.99■■■□□ 2.87
DNMT1-216ENST00000588952 NUP160Q12769 1436 aa32.97■■■□□ 2.87
DNMT1-216ENST00000588952 EHMT2Q96KQ7 1210 aa32.93■■■□□ 2.86
DNMT1-216ENST00000588952 GOLGA3Q08378 1498 aa32.89■■■□□ 2.86
DNMT1-216ENST00000588952 OSCARQ8IYS5 282 aa32.89■■■□□ 2.86
DNMT1-216ENST00000588952 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms