RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 NEFLP07196 543 aa22.55■■□□□ 1.2
GHDC-207ENST00000587427 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
GHDC-207ENST00000587427 HIRIP3Q9BW71 556 aaPredicted RBP22.54■■□□□ 1.2
GHDC-207ENST00000587427 ASXL2Q76L83 1435 aa22.54■■□□□ 1.2
GHDC-207ENST00000587427 CFAP43Q8NDM7 1665 aa22.53■■□□□ 1.2
GHDC-207ENST00000587427 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
GHDC-207ENST00000587427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.19
GHDC-207ENST00000587427 ANP32CO43423 234 aa22.49■■□□□ 1.19
GHDC-207ENST00000587427 MAGI3Q5TCQ9 1506 aa22.49■■□□□ 1.19
GHDC-207ENST00000587427 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
GHDC-207ENST00000587427 CCDC18Q5T9S5 1454 aa22.46■■□□□ 1.19
GHDC-207ENST00000587427 WDR7Q9Y4E6 1490 aa22.44■■□□□ 1.18
GHDC-207ENST00000587427 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
GHDC-207ENST00000587427 FAM69CQ0P6D2 419 aa22.4■■□□□ 1.18
GHDC-207ENST00000587427 CDK11AQ9UQ88 783 aaPredicted RBP22.4■■□□□ 1.18
GHDC-207ENST00000587427 MTUS2Q5JR59 1369 aa22.4■■□□□ 1.18
GHDC-207ENST00000587427 MSH5O43196 834 aa22.38■■□□□ 1.17
GHDC-207ENST00000587427 KIF14Q15058 1648 aa22.37■■□□□ 1.17
GHDC-207ENST00000587427 TROQ12816 1431 aaPredicted RBP22.36■■□□□ 1.17
GHDC-207ENST00000587427 ABCC10Q5T3U5 1492 aa22.34■■□□□ 1.17
GHDC-207ENST00000587427 DIP2BQ9P265 1576 aa22.34■■□□□ 1.17
GHDC-207ENST00000587427 TONSLQ96HA7 1378 aa22.34■■□□□ 1.17
GHDC-207ENST00000587427 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
GHDC-207ENST00000587427 TTC37Q6PGP7 1564 aa22.29■■□□□ 1.16
GHDC-207ENST00000587427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.29■■□□□ 1.16
GHDC-207ENST00000587427 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
GHDC-207ENST00000587427 EHBP1L1Q8N3D4 1523 aa22.28■■□□□ 1.16
GHDC-207ENST00000587427 HFM1A2PYH4 1435 aa22.27■■□□□ 1.16
GHDC-207ENST00000587427 TSPOAP1O95153 1857 aa22.25■■□□□ 1.15
GHDC-207ENST00000587427 IRX6P78412 446 aaPredicted RBP22.24■■□□□ 1.15
GHDC-207ENST00000587427 NCOA2Q15596 1464 aa22.24■■□□□ 1.15
GHDC-207ENST00000587427 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
GHDC-207ENST00000587427 FANCIQ9NVI1 1328 aa22.21■■□□□ 1.15
GHDC-207ENST00000587427 PTPN23Q9H3S7 1636 aa22.21■■□□□ 1.15
GHDC-207ENST00000587427 ABCA9Q8IUA7 1624 aa22.21■■□□□ 1.15
GHDC-207ENST00000587427 GLI2P10070 1586 aa22.19■■□□□ 1.14
GHDC-207ENST00000587427 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
GHDC-207ENST00000587427 PTPRKQ15262 1439 aa22.19■■□□□ 1.14
GHDC-207ENST00000587427 MAP3K4Q9Y6R4 1608 aa22.19■■□□□ 1.14
GHDC-207ENST00000587427 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
GHDC-207ENST00000587427 ERICH6BQ5W0A0 696 aa22.17■■□□□ 1.14
GHDC-207ENST00000587427 ZNF777Q9ULD5 760 aaPredicted RBP22.16■■□□□ 1.14
GHDC-207ENST00000587427 NAIPQ13075 1403 aa22.16■■□□□ 1.14
GHDC-207ENST00000587427 GPATCH8Q9UKJ3 1502 aaKnown RBP22.15■■□□□ 1.14
GHDC-207ENST00000587427 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.13
GHDC-207ENST00000587427 CDC42BPAQ5VT25 1732 aa22.14■■□□□ 1.13
GHDC-207ENST00000587427 ZNF644Q9H582 1327 aaPredicted RBP22.14■■□□□ 1.13
GHDC-207ENST00000587427 PLCH2O75038 1416 aa22.12■■□□□ 1.13
GHDC-207ENST00000587427 MYO5CQ9NQX4 1742 aa22.11■■□□□ 1.13
GHDC-207ENST00000587427 CDC42BPBQ9Y5S2 1711 aa22.11■■□□□ 1.13
GHDC-207ENST00000587427 CFDP1Q9UEE9 299 aaPredicted RBP22.11■■□□□ 1.13
GHDC-207ENST00000587427 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
GHDC-207ENST00000587427 ERICH6Q7L0X2 663 aa22.09■■□□□ 1.13
GHDC-207ENST00000587427 MYOM3Q5VTT5 1437 aa22.09■■□□□ 1.13
GHDC-207ENST00000587427 FANCAO15360 1455 aa22.08■■□□□ 1.13
GHDC-207ENST00000587427 PREX2Q70Z35 1606 aa22.08■■□□□ 1.12
GHDC-207ENST00000587427 WASHC2AQ641Q2 1341 aa22.07■■□□□ 1.12
GHDC-207ENST00000587427 HSPA5P11021 654 aaKnown RBP22.04■■□□□ 1.12
GHDC-207ENST00000587427 EFCAB2Q5VUJ9 269 aa22.04■■□□□ 1.12
GHDC-207ENST00000587427 PPP4R2Q9NY27 417 aa22.03■■□□□ 1.12
GHDC-207ENST00000587427 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.11
GHDC-207ENST00000587427 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
GHDC-207ENST00000587427 CNTLNQ9NXG0 1405 aa22.01■■□□□ 1.11
GHDC-207ENST00000587427 SAMD9LQ8IVG5 1584 aa22.01■■□□□ 1.11
GHDC-207ENST00000587427 COL17A1Q9UMD9 1497 aaPredicted RBP22.01■■□□□ 1.11
GHDC-207ENST00000587427 RAPGEF3O95398 923 aa22.01■■□□□ 1.11
GHDC-207ENST00000587427 ITSN2Q9NZM3 1697 aa22■■□□□ 1.11
GHDC-207ENST00000587427 TEX14Q8IWB6 1497 aa21.99■■□□□ 1.11
GHDC-207ENST00000587427 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
GHDC-207ENST00000587427 EIF4G2P78344 907 aaKnown RBP eCLIP21.98■■□□□ 1.11
GHDC-207ENST00000587427 CCDC184Q52MB2 194 aa21.97■■□□□ 1.11
GHDC-207ENST00000587427 ADGRL1O94910 1474 aa21.97■■□□□ 1.11
GHDC-207ENST00000587427 CAMSAP2Q08AD1 1489 aa21.97■■□□□ 1.11
GHDC-207ENST00000587427 SCAPERQ9BY12 1400 aa21.96■■□□□ 1.11
GHDC-207ENST00000587427 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
GHDC-207ENST00000587427 ARAP3Q8WWN8 1544 aa21.96■■□□□ 1.11
GHDC-207ENST00000587427 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
GHDC-207ENST00000587427 AFAP1Q8N556 730 aa21.96■■□□□ 1.11
GHDC-207ENST00000587427 TCOF1Q13428 1488 aaKnown RBP21.94■■□□□ 1.1
GHDC-207ENST00000587427 NEO1Q92859 1461 aa21.94■■□□□ 1.1
GHDC-207ENST00000587427 GCC2Q8IWJ2 1684 aa21.93■■□□□ 1.1
GHDC-207ENST00000587427 MIA2Q96PC5 1412 aa21.93■■□□□ 1.1
GHDC-207ENST00000587427 TRAPPC8Q9Y2L5 1435 aa21.93■■□□□ 1.1
GHDC-207ENST00000587427 MYT1LQ9UL68 1186 aa21.92■■□□□ 1.1
GHDC-207ENST00000587427 NCOA1Q15788 1441 aa21.92■■□□□ 1.1
GHDC-207ENST00000587427 ABCC1P33527 1531 aa21.92■■□□□ 1.1
GHDC-207ENST00000587427 B4GALNT3Q6L9W6 998 aa21.92■■□□□ 1.1
GHDC-207ENST00000587427 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
GHDC-207ENST00000587427 PRKRIP1Q9H875 184 aaPredicted RBP21.9■■□□□ 1.1
GHDC-207ENST00000587427 CCDC7Q96M83 1385 aa21.9■■□□□ 1.1
GHDC-207ENST00000587427 CFAP74Q9C0B2 1584 aa21.89■■□□□ 1.1
GHDC-207ENST00000587427 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
GHDC-207ENST00000587427 FAM9BQ8IZU0 186 aa21.88■■□□□ 1.09
GHDC-207ENST00000587427 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
GHDC-207ENST00000587427 KDM6BO15054 1643 aa21.87■■□□□ 1.09
GHDC-207ENST00000587427 FRMPD1Q5SYB0 1578 aa21.86■■□□□ 1.09
GHDC-207ENST00000587427 CHIC2Q9UKJ5 165 aa21.85■■□□□ 1.09
GHDC-207ENST00000587427 POGZQ7Z3K3 1410 aa21.85■■□□□ 1.09
GHDC-207ENST00000587427 DEKP35659 375 aaKnown RBP21.84■■□□□ 1.09
GHDC-207ENST00000587427 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms