RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
APOC1-201ENST00000586638 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
APOC1-201ENST00000586638 KIF14Q15058 1648 aa15.46■□□□□ 0.06
APOC1-201ENST00000586638 PTPRMP28827 1452 aa15.45■□□□□ 0.06
APOC1-201ENST00000586638 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
APOC1-201ENST00000586638 NEO1Q92859 1461 aa15.44■□□□□ 0.06
APOC1-201ENST00000586638 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
APOC1-201ENST00000586638 ABCA9Q8IUA7 1624 aa15.43■□□□□ 0.06
APOC1-201ENST00000586638 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
APOC1-201ENST00000586638 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
APOC1-201ENST00000586638 SOCS7O14512 581 aa15.42■□□□□ 0.06
APOC1-201ENST00000586638 ITSN2Q9NZM3 1697 aa15.4■□□□□ 0.06
APOC1-201ENST00000586638 HRCP23327 699 aa15.39■□□□□ 0.05
APOC1-201ENST00000586638 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
APOC1-201ENST00000586638 DENND4BO75064 1496 aaPredicted RBP15.36■□□□□ 0.05
APOC1-201ENST00000586638 TCOF1Q13428 1488 aaKnown RBP15.36■□□□□ 0.05
APOC1-201ENST00000586638 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
APOC1-201ENST00000586638 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
APOC1-201ENST00000586638 AKNAQ7Z591 1439 aa15.35■□□□□ 0.05
APOC1-201ENST00000586638 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
APOC1-201ENST00000586638 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
APOC1-201ENST00000586638 ITGAEP38570 1179 aa15.34■□□□□ 0.05
APOC1-201ENST00000586638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.04
APOC1-201ENST00000586638 HSPA2P54652 639 aa15.32■□□□□ 0.04
APOC1-201ENST00000586638 ILDR2Q71H61 639 aa15.32■□□□□ 0.04
APOC1-201ENST00000586638 MLECQ14165 292 aa15.31■□□□□ 0.04
APOC1-201ENST00000586638 MIA2Q96PC5 1412 aa15.31■□□□□ 0.04
APOC1-201ENST00000586638 FANCAO15360 1455 aa15.31■□□□□ 0.04
APOC1-201ENST00000586638 BCORL1Q5H9F3 1711 aa15.31■□□□□ 0.04
APOC1-201ENST00000586638 FRMPD1Q5SYB0 1578 aa15.3■□□□□ 0.04
APOC1-201ENST00000586638 TTC37Q6PGP7 1564 aa15.3■□□□□ 0.04
APOC1-201ENST00000586638 POGZQ7Z3K3 1410 aa15.3■□□□□ 0.04
APOC1-201ENST00000586638 MADDQ8WXG6 1647 aa15.29■□□□□ 0.04
APOC1-201ENST00000586638 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
APOC1-201ENST00000586638 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
APOC1-201ENST00000586638 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
APOC1-201ENST00000586638 DNMT1P26358 1616 aaKnown RBP15.27■□□□□ 0.03
APOC1-201ENST00000586638 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
APOC1-201ENST00000586638 CROCC2H7BZ55 1655 aa15.26■□□□□ 0.03
APOC1-201ENST00000586638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.26■□□□□ 0.03
APOC1-201ENST00000586638 CDC42BPBQ9Y5S2 1711 aa15.26■□□□□ 0.03
APOC1-201ENST00000586638 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
APOC1-201ENST00000586638 YEATS2Q9ULM3 1422 aa15.26■□□□□ 0.03
APOC1-201ENST00000586638 EFCAB2Q5VUJ9 269 aa15.25■□□□□ 0.03
APOC1-201ENST00000586638 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
APOC1-201ENST00000586638 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
APOC1-201ENST00000586638 CCER1Q8TC90 406 aaPredicted RBP15.24■□□□□ 0.03
APOC1-201ENST00000586638 MAGI2Q86UL8 1455 aa15.24■□□□□ 0.03
APOC1-201ENST00000586638 ARHGEF40Q8TER5 1519 aa15.23■□□□□ 0.03
APOC1-201ENST00000586638 CERKQ8TCT0 537 aa15.23■□□□□ 0.03
APOC1-201ENST00000586638 PLCH2O75038 1416 aa15.23■□□□□ 0.03
APOC1-201ENST00000586638 RIMS1Q86UR5 1692 aaKnown RBP15.22■□□□□ 0.03
APOC1-201ENST00000586638 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
APOC1-201ENST00000586638 ADGBQ8N7X0 1667 aa15.22■□□□□ 0.03
APOC1-201ENST00000586638 CFAP74Q9C0B2 1584 aa15.21■□□□□ 0.03
APOC1-201ENST00000586638 ZFYVE16Q7Z3T8 1539 aa15.21■□□□□ 0.03
APOC1-201ENST00000586638 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.02
APOC1-201ENST00000586638 DISP3Q9P2K9 1392 aa15.21■□□□□ 0.02
APOC1-201ENST00000586638 SAMD9LQ8IVG5 1584 aa15.2■□□□□ 0.02
APOC1-201ENST00000586638 DAPK1P53355 1430 aa15.2■□□□□ 0.02
APOC1-201ENST00000586638 SETD5Q9C0A6 1442 aa15.2■□□□□ 0.02
APOC1-201ENST00000586638 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
APOC1-201ENST00000586638 CEBPAP49715 358 aaPredicted RBP15.19■□□□□ 0.02
APOC1-201ENST00000586638 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
APOC1-201ENST00000586638 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
APOC1-201ENST00000586638 ATP10AO60312 1499 aa15.18■□□□□ 0.02
APOC1-201ENST00000586638 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
APOC1-201ENST00000586638 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
APOC1-201ENST00000586638 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
APOC1-201ENST00000586638 HFM1A2PYH4 1435 aa15.17■□□□□ 0.02
APOC1-201ENST00000586638 ABCC5O15440 1437 aa15.17■□□□□ 0.02
APOC1-201ENST00000586638 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
APOC1-201ENST00000586638 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
APOC1-201ENST00000586638 ZEB1P37275 1124 aaPredicted RBP15.15■□□□□ 0.02
APOC1-201ENST00000586638 ZNF777Q9ULD5 760 aaPredicted RBP15.15■□□□□ 0.02
APOC1-201ENST00000586638 NAIPQ13075 1403 aa15.14■□□□□ 0.01
APOC1-201ENST00000586638 ARHGEF5Q12774 1597 aa15.14■□□□□ 0.01
APOC1-201ENST00000586638 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
APOC1-201ENST00000586638 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
APOC1-201ENST00000586638 CHIC2Q9UKJ5 165 aa15.12■□□□□ 0.01
APOC1-201ENST00000586638 SIGLEC1Q9BZZ2 1709 aa15.12■□□□□ 0.01
APOC1-201ENST00000586638 SHANK2Q9UPX8 1470 aa15.1■□□□□ 0.01
APOC1-201ENST00000586638 ESF1Q9H501 851 aaKnown RBP15.1■□□□□ 0.01
APOC1-201ENST00000586638 ARHGEF12Q9NZN5 1544 aa15.1■□□□□ 0.01
APOC1-201ENST00000586638 ADGRL2O95490 1459 aa15.09■□□□□ 0.01
APOC1-201ENST00000586638 ABCC1P33527 1531 aa15.09■□□□□ 0.01
APOC1-201ENST00000586638 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0.01
APOC1-201ENST00000586638 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
APOC1-201ENST00000586638 ROCK1Q13464 1354 aa15.08■□□□□ 0
APOC1-201ENST00000586638 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0
APOC1-201ENST00000586638 MBD5Q9P267 1494 aa15.07■□□□□ 0
APOC1-201ENST00000586638 SPATA31D1Q6ZQQ2 1576 aa15.07■□□□□ 0
APOC1-201ENST00000586638 FER1L4A9Z1Z3 1794 aa15.06■□□□□ 0
APOC1-201ENST00000586638 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
APOC1-201ENST00000586638 PLEKHH2Q8IVE3 1493 aa15.05■□□□□ -0
APOC1-201ENST00000586638 MAST1Q9Y2H9 1570 aa15.05■□□□□ -0
APOC1-201ENST00000586638 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
APOC1-201ENST00000586638 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
APOC1-201ENST00000586638 PLXNC1O60486 1568 aa15.01□□□□□ -0.01
APOC1-201ENST00000586638 NCOA1Q15788 1441 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms