RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 AKNAQ7Z591 1439 aa17.64■□□□□ 0.42
DNMT1-207ENST00000586588 HFM1A2PYH4 1435 aa17.64■□□□□ 0.41
DNMT1-207ENST00000586588 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.41
DNMT1-207ENST00000586588 FHOD3Q2V2M9 1422 aa17.63■□□□□ 0.41
DNMT1-207ENST00000586588 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
DNMT1-207ENST00000586588 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
DNMT1-207ENST00000586588 NCOA1Q15788 1441 aa17.62■□□□□ 0.41
DNMT1-207ENST00000586588 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
DNMT1-207ENST00000586588 CCDC7Q96M83 1385 aa17.6■□□□□ 0.41
DNMT1-207ENST00000586588 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
DNMT1-207ENST00000586588 GSE1Q14687 1217 aa17.59■□□□□ 0.41
DNMT1-207ENST00000586588 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
DNMT1-207ENST00000586588 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
DNMT1-207ENST00000586588 SAMD9Q5K651 1589 aa17.59■□□□□ 0.41
DNMT1-207ENST00000586588 PTPN23Q9H3S7 1636 aa17.59■□□□□ 0.41
DNMT1-207ENST00000586588 BRPF3Q9ULD4 1205 aa17.57■□□□□ 0.4
DNMT1-207ENST00000586588 MS4A1P11836 297 aa17.56■□□□□ 0.4
DNMT1-207ENST00000586588 RSPH6AQ9H0K4 717 aa17.56■□□□□ 0.4
DNMT1-207ENST00000586588 FGD6Q6ZV73 1430 aa17.54■□□□□ 0.4
DNMT1-207ENST00000586588 PDE4AP27815 886 aa17.54■□□□□ 0.4
DNMT1-207ENST00000586588 EIF5BO60841 1220 aaKnown RBP17.54■□□□□ 0.4
DNMT1-207ENST00000586588 BACH2Q9BYV9 841 aa17.54■□□□□ 0.4
DNMT1-207ENST00000586588 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
DNMT1-207ENST00000586588 NAIPQ13075 1403 aa17.52■□□□□ 0.4
DNMT1-207ENST00000586588 IQGAP2Q13576 1575 aa17.52■□□□□ 0.39
DNMT1-207ENST00000586588 GRIN2AQ12879 1464 aa17.52■□□□□ 0.39
DNMT1-207ENST00000586588 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
DNMT1-207ENST00000586588 FYCO1Q9BQS8 1478 aa17.51■□□□□ 0.39
DNMT1-207ENST00000586588 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
DNMT1-207ENST00000586588 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
DNMT1-207ENST00000586588 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
DNMT1-207ENST00000586588 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
DNMT1-207ENST00000586588 FAM43AQ8N2R8 423 aa17.48■□□□□ 0.39
DNMT1-207ENST00000586588 LRRIQ1Q96JM4 1722 aa17.47■□□□□ 0.39
DNMT1-207ENST00000586588 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
DNMT1-207ENST00000586588 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
DNMT1-207ENST00000586588 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
DNMT1-207ENST00000586588 NFKBIBQ15653 356 aa17.45■□□□□ 0.38
DNMT1-207ENST00000586588 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
DNMT1-207ENST00000586588 PKNOX2Q96KN3 472 aa17.43■□□□□ 0.38
DNMT1-207ENST00000586588 HECW1Q76N89 1606 aa17.43■□□□□ 0.38
DNMT1-207ENST00000586588 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
DNMT1-207ENST00000586588 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
DNMT1-207ENST00000586588 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
DNMT1-207ENST00000586588 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
DNMT1-207ENST00000586588 RRP1P56182 461 aaKnown RBP17.4■□□□□ 0.38
DNMT1-207ENST00000586588 DENND4BO75064 1496 aaPredicted RBP17.4■□□□□ 0.38
DNMT1-207ENST00000586588 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
DNMT1-207ENST00000586588 DHX29Q7Z478 1369 aaKnown RBP17.39■□□□□ 0.37
DNMT1-207ENST00000586588 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
DNMT1-207ENST00000586588 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
DNMT1-207ENST00000586588 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
DNMT1-207ENST00000586588 NUP160Q12769 1436 aa17.37■□□□□ 0.37
DNMT1-207ENST00000586588 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
DNMT1-207ENST00000586588 FBLN2P98095 1184 aa17.37■□□□□ 0.37
DNMT1-207ENST00000586588 GLIPR1L2Q4G1C9 344 aa17.37■□□□□ 0.37
DNMT1-207ENST00000586588 EXOC6Q8TAG9 804 aa17.37■□□□□ 0.37
DNMT1-207ENST00000586588 PNISRQ8TF01 805 aaKnown RBP17.36■□□□□ 0.37
DNMT1-207ENST00000586588 MYOM3Q5VTT5 1437 aa17.34■□□□□ 0.37
DNMT1-207ENST00000586588 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.37
DNMT1-207ENST00000586588 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
DNMT1-207ENST00000586588 LRPPRCP42704 1394 aaKnown RBP17.31■□□□□ 0.36
DNMT1-207ENST00000586588 MTUS2Q5JR59 1369 aa17.31■□□□□ 0.36
DNMT1-207ENST00000586588 RCAN3Q9UKA8 241 aa17.3■□□□□ 0.36
DNMT1-207ENST00000586588 MAGI3Q5TCQ9 1506 aa17.3■□□□□ 0.36
DNMT1-207ENST00000586588 CHD1O14646 1710 aa17.3■□□□□ 0.36
DNMT1-207ENST00000586588 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-207ENST00000586588 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-207ENST00000586588 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
DNMT1-207ENST00000586588 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
DNMT1-207ENST00000586588 TEX14Q8IWB6 1497 aa17.28■□□□□ 0.36
DNMT1-207ENST00000586588 MPHOSPH9Q99550 1183 aa17.27■□□□□ 0.36
DNMT1-207ENST00000586588 DCAF11Q8TEB1 546 aa17.27■□□□□ 0.35
DNMT1-207ENST00000586588 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
DNMT1-207ENST00000586588 TMC1Q8TDI8 760 aa17.26■□□□□ 0.35
DNMT1-207ENST00000586588 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
DNMT1-207ENST00000586588 EPRSP07814 1512 aaKnown RBP17.24■□□□□ 0.35
DNMT1-207ENST00000586588 SUPT6HQ7KZ85 1726 aaKnown RBP17.23■□□□□ 0.35
DNMT1-207ENST00000586588 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
DNMT1-207ENST00000586588 BRD4O60885 1362 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-207ENST00000586588 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
DNMT1-207ENST00000586588 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
DNMT1-207ENST00000586588 ROCK2O75116 1388 aaKnown RBP17.22■□□□□ 0.35
DNMT1-207ENST00000586588 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
DNMT1-207ENST00000586588 JPH4Q96JJ6 628 aa17.22■□□□□ 0.35
DNMT1-207ENST00000586588 FRAT2O75474 233 aaPredicted RBP17.21■□□□□ 0.35
DNMT1-207ENST00000586588 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
DNMT1-207ENST00000586588 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.35
DNMT1-207ENST00000586588 SLC4A3P48751 1232 aa17.2■□□□□ 0.34
DNMT1-207ENST00000586588 ARHGEF11O15085 1522 aa17.2■□□□□ 0.34
DNMT1-207ENST00000586588 EHBP1L1Q8N3D4 1523 aa17.2■□□□□ 0.34
DNMT1-207ENST00000586588 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
DNMT1-207ENST00000586588 PLB1Q6P1J6 1458 aa17.19■□□□□ 0.34
DNMT1-207ENST00000586588 KDM6BO15054 1643 aa17.18■□□□□ 0.34
DNMT1-207ENST00000586588 KIF15Q9NS87 1388 aa17.17■□□□□ 0.34
DNMT1-207ENST00000586588 ZMYND15Q9H091 742 aa17.17■□□□□ 0.34
DNMT1-207ENST00000586588 BCORL1Q5H9F3 1711 aa17.17■□□□□ 0.34
DNMT1-207ENST00000586588 FAM161AQ3B820 660 aa17.16■□□□□ 0.34
DNMT1-207ENST00000586588 RRAGDQ9NQL2 400 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-207ENST00000586588 L1TD1Q5T7N2 865 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms