RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 CFTRP13569 1480 aa15.82■□□□□ 0.12
ERBB2-219ENST00000584601 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
ERBB2-219ENST00000584601 MYH16Q9H6N6 1097 aa15.8■□□□□ 0.12
ERBB2-219ENST00000584601 GGT6Q6P531 493 aa15.79■□□□□ 0.12
ERBB2-219ENST00000584601 ERICH3Q5RHP9 1530 aa15.79■□□□□ 0.12
ERBB2-219ENST00000584601 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
ERBB2-219ENST00000584601 IPO9Q96P70 1041 aaKnown RBP15.79■□□□□ 0.12
ERBB2-219ENST00000584601 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
ERBB2-219ENST00000584601 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
ERBB2-219ENST00000584601 C14orf37Q86TY3 774 aa15.78■□□□□ 0.12
ERBB2-219ENST00000584601 MAPK8IP3Q9UPT6 1336 aa15.77■□□□□ 0.12
ERBB2-219ENST00000584601 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.12
ERBB2-219ENST00000584601 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.11
ERBB2-219ENST00000584601 HMGXB3Q12766 1538 aa15.76■□□□□ 0.11
ERBB2-219ENST00000584601 RCAN3Q9UKA8 241 aa15.75■□□□□ 0.11
ERBB2-219ENST00000584601 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
ERBB2-219ENST00000584601 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
ERBB2-219ENST00000584601 GOLGA6L22H0YM25 854 aa15.74■□□□□ 0.11
ERBB2-219ENST00000584601 PTPRGP23470 1445 aa15.73■□□□□ 0.11
ERBB2-219ENST00000584601 ZBTB7CA1YPR0 619 aa15.73■□□□□ 0.11
ERBB2-219ENST00000584601 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
ERBB2-219ENST00000584601 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
ERBB2-219ENST00000584601 NAP1L5Q96NT1 182 aaPredicted RBP15.72■□□□□ 0.11
ERBB2-219ENST00000584601 KIF3BO15066 747 aa15.72■□□□□ 0.11
ERBB2-219ENST00000584601 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
ERBB2-219ENST00000584601 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.11
ERBB2-219ENST00000584601 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
ERBB2-219ENST00000584601 FTSJ3Q8IY81 847 aaKnown RBP15.71■□□□□ 0.11
ERBB2-219ENST00000584601 RALBP1Q15311 655 aa15.7■□□□□ 0.1
ERBB2-219ENST00000584601 MLECQ14165 292 aa15.7■□□□□ 0.1
ERBB2-219ENST00000584601 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
ERBB2-219ENST00000584601 ARAP1Q96P48 1450 aa15.7■□□□□ 0.1
ERBB2-219ENST00000584601 CUX1P39880 1505 aa15.69■□□□□ 0.1
ERBB2-219ENST00000584601 SRPK2P78362 688 aaKnown RBP15.69■□□□□ 0.1
ERBB2-219ENST00000584601 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
ERBB2-219ENST00000584601 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
ERBB2-219ENST00000584601 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.18e-7■■■■□ 26
ERBB2-219ENST00000584601 PRXQ9BXM0 1461 aa15.69■□□□□ 0.1
ERBB2-219ENST00000584601 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
ERBB2-219ENST00000584601 MORC1Q86VD1 984 aa15.68■□□□□ 0.1
ERBB2-219ENST00000584601 CASKIN1Q8WXD9 1431 aa15.68■□□□□ 0.1
ERBB2-219ENST00000584601 HDGFP51858 240 aaKnown RBP15.68■□□□□ 0.1
ERBB2-219ENST00000584601 SAFB2Q14151 953 aaKnown RBP eCLIP15.66■□□□□ 0.1
ERBB2-219ENST00000584601 PRKRIP1Q9H875 184 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-219ENST00000584601 PNNQ9H307 717 aaKnown RBP15.66■□□□□ 0.1
ERBB2-219ENST00000584601 NCLP19338 710 aaKnown RBP15.65■□□□□ 0.1
ERBB2-219ENST00000584601 EIF3AQ14152 1382 aaKnown RBP15.65■□□□□ 0.1
ERBB2-219ENST00000584601 ZBED9Q6R2W3 1325 aa15.64■□□□□ 0.09
ERBB2-219ENST00000584601 NESP48681 1621 aa15.64■□□□□ 0.09
ERBB2-219ENST00000584601 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
ERBB2-219ENST00000584601 CC2D2AQ9P2K1 1620 aa15.64■□□□□ 0.09
ERBB2-219ENST00000584601 CCDC144AA2RUR9 1427 aa15.63■□□□□ 0.09
ERBB2-219ENST00000584601 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
ERBB2-219ENST00000584601 BICRAQ9NZM4 1560 aa15.63■□□□□ 0.09
ERBB2-219ENST00000584601 STK26Q9P289 416 aa15.63■□□□□ 0.09
ERBB2-219ENST00000584601 FYCO1Q9BQS8 1478 aa15.62■□□□□ 0.09
ERBB2-219ENST00000584601 MS4A1P11836 297 aa15.62■□□□□ 0.09
ERBB2-219ENST00000584601 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
ERBB2-219ENST00000584601 NCOA2Q15596 1464 aa15.61■□□□□ 0.09
ERBB2-219ENST00000584601 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.6■□□□□ 0.09
ERBB2-219ENST00000584601 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
ERBB2-219ENST00000584601 UACAQ9BZF9 1416 aa15.6■□□□□ 0.09
ERBB2-219ENST00000584601 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
ERBB2-219ENST00000584601 PDE3BQ13370 1112 aa15.59■□□□□ 0.09
ERBB2-219ENST00000584601 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.09
ERBB2-219ENST00000584601 NLRP13Q86W25 1043 aa15.58■□□□□ 0.09
ERBB2-219ENST00000584601 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
ERBB2-219ENST00000584601 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
ERBB2-219ENST00000584601 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
ERBB2-219ENST00000584601 HDGFL2Q7Z4V5 671 aaPredicted RBP15.58■□□□□ 0.08
ERBB2-219ENST00000584601 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.08
ERBB2-219ENST00000584601 ZNF644Q9H582 1327 aaPredicted RBP15.57■□□□□ 0.08
ERBB2-219ENST00000584601 HSP90AB1P08238 724 aaKnown RBP15.57■□□□□ 0.08
ERBB2-219ENST00000584601 PTMAP06454 111 aaKnown RBP15.57■□□□□ 0.08
ERBB2-219ENST00000584601 SLKQ9H2G2 1235 aaPredicted RBP15.56■□□□□ 0.08
ERBB2-219ENST00000584601 PDE4AP27815 886 aa15.56■□□□□ 0.08
ERBB2-219ENST00000584601 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
ERBB2-219ENST00000584601 HSCBQ8IWL3 235 aa15.56■□□□□ 0.08
ERBB2-219ENST00000584601 SPRYD3Q8NCJ5 442 aa15.55■□□□□ 0.08
ERBB2-219ENST00000584601 KIF15Q9NS87 1388 aa15.54■□□□□ 0.08
ERBB2-219ENST00000584601 LMOD2Q6P5Q4 547 aa15.54■□□□□ 0.08
ERBB2-219ENST00000584601 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
ERBB2-219ENST00000584601 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-219ENST00000584601 USP47Q96K76 1375 aa15.54■□□□□ 0.08
ERBB2-219ENST00000584601 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
ERBB2-219ENST00000584601 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
ERBB2-219ENST00000584601 A0A0G2JS52 829 aa15.52■□□□□ 0.07
ERBB2-219ENST00000584601 DNTTIP2Q5QJE6 756 aaKnown RBP15.52■□□□□ 0.07
ERBB2-219ENST00000584601 EXOC6Q8TAG9 804 aa15.52■□□□□ 0.07
ERBB2-219ENST00000584601 U2AF1L5P0DN76 240 aaPredicted RBP15.51■□□□□ 0.07
ERBB2-219ENST00000584601 U2AF1Q01081 240 aaKnown RBP eCLIP15.51■□□□□ 0.07
ERBB2-219ENST00000584601 CASC1Q6TDU7 716 aa15.51■□□□□ 0.07
ERBB2-219ENST00000584601 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
ERBB2-219ENST00000584601 MYBBP1AQ9BQG0 1328 aaKnown RBP15.5■□□□□ 0.07
ERBB2-219ENST00000584601 RRP1P56182 461 aaKnown RBP15.5■□□□□ 0.07
ERBB2-219ENST00000584601 SOX12O15370 315 aa15.49■□□□□ 0.07
ERBB2-219ENST00000584601 GOLGA2Q08379 1002 aa15.49■□□□□ 0.07
ERBB2-219ENST00000584601 GZF1Q9H116 711 aaPredicted RBP15.49■□□□□ 0.07
ERBB2-219ENST00000584601 ANKRD50Q9ULJ7 1429 aa15.48■□□□□ 0.07
ERBB2-219ENST00000584601 TIAM1Q13009 1591 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms