RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 UGGT2Q9NYU1 1516 aa7.52□□□□□ -1.2
CTC1-209ENST00000581729 RAPGEF3O95398 923 aa7.52□□□□□ -1.21
CTC1-209ENST00000581729 SIGLEC1Q9BZZ2 1709 aa7.51□□□□□ -1.21
CTC1-209ENST00000581729 RIMS1Q86UR5 1692 aaKnown RBP7.51□□□□□ -1.21
CTC1-209ENST00000581729 ARID3CA6NKF2 412 aa7.5□□□□□ -1.21
CTC1-209ENST00000581729 EVX2Q03828 476 aa7.5□□□□□ -1.21
CTC1-209ENST00000581729 ABCA8O94911 1581 aa7.5□□□□□ -1.21
CTC1-209ENST00000581729 ARID4BQ4LE39 1312 aaPredicted RBP7.47□□□□□ -1.21
CTC1-209ENST00000581729 FXR2P51116 673 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTC1-209ENST00000581729 REM2Q8IYK8 340 aaPredicted RBP7.45□□□□□ -1.22
CTC1-209ENST00000581729 ARHGEF40Q8TER5 1519 aa7.45□□□□□ -1.22
CTC1-209ENST00000581729 ABCA9Q8IUA7 1624 aa7.45□□□□□ -1.22
CTC1-209ENST00000581729 ATP10BO94823 1461 aa7.44□□□□□ -1.22
CTC1-209ENST00000581729 YEATS2Q9ULM3 1422 aa7.44□□□□□ -1.22
CTC1-209ENST00000581729 RAPGEF2Q9Y4G8 1499 aa7.43□□□□□ -1.22
CTC1-209ENST00000581729 STRCQ7RTU9 1775 aa7.43□□□□□ -1.22
CTC1-209ENST00000581729 NEO1Q92859 1461 aa7.42□□□□□ -1.22
CTC1-209ENST00000581729 CEBPAP49715 358 aaPredicted RBP7.41□□□□□ -1.22
CTC1-209ENST00000581729 MLECQ14165 292 aa7.41□□□□□ -1.22
CTC1-209ENST00000581729 SAMD1Q6SPF0 538 aaPredicted RBP7.41□□□□□ -1.22
CTC1-209ENST00000581729 LTBP4Q8N2S1 1624 aa7.41□□□□□ -1.22
CTC1-209ENST00000581729 NPM3O75607 178 aaKnown RBP7.4□□□□□ -1.22
CTC1-209ENST00000581729 TTC37Q6PGP7 1564 aa7.4□□□□□ -1.22
CTC1-209ENST00000581729 RICTORQ6R327 1708 aa7.4□□□□□ -1.23
CTC1-209ENST00000581729 PHLDB1Q86UU1 1377 aa7.39□□□□□ -1.23
CTC1-209ENST00000581729 FHOD3Q2V2M9 1422 aa7.38□□□□□ -1.23
CTC1-209ENST00000581729 GABBR2O75899 941 aa7.38□□□□□ -1.23
CTC1-209ENST00000581729 POLA2Q14181 598 aa7.38□□□□□ -1.23
CTC1-209ENST00000581729 P3H3Q8IVL6 736 aa7.38□□□□□ -1.23
CTC1-209ENST00000581729 FANCAO15360 1455 aa7.37□□□□□ -1.23
CTC1-209ENST00000581729 DENND4BO75064 1496 aaPredicted RBP7.37□□□□□ -1.23
CTC1-209ENST00000581729 PITPNM1O00562 1244 aa7.37□□□□□ -1.23
CTC1-209ENST00000581729 FER1L4A9Z1Z3 1794 aa7.37□□□□□ -1.23
CTC1-209ENST00000581729 CTTNBP2Q8WZ74 1663 aa7.37□□□□□ -1.23
CTC1-209ENST00000581729 ZMYM4Q5VZL5 1548 aa7.37□□□□□ -1.23
CTC1-209ENST00000581729 ZFYVE16Q7Z3T8 1539 aa7.37□□□□□ -1.23
CTC1-209ENST00000581729 ARHGEF12Q9NZN5 1544 aa7.37□□□□□ -1.23
CTC1-209ENST00000581729 AKNAQ7Z591 1439 aa7.36□□□□□ -1.23
CTC1-209ENST00000581729 PREX1Q8TCU6 1659 aa7.36□□□□□ -1.23
CTC1-209ENST00000581729 GOLGA3Q08378 1498 aa7.36□□□□□ -1.23
CTC1-209ENST00000581729 HECW1Q76N89 1606 aa7.35□□□□□ -1.23
CTC1-209ENST00000581729 NUP153P49790 1475 aaKnown RBP7.35□□□□□ -1.23
CTC1-209ENST00000581729 POGZQ7Z3K3 1410 aa7.34□□□□□ -1.23
CTC1-209ENST00000581729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTC1-209ENST00000581729 PTPRTO14522 1441 aa7.33□□□□□ -1.24
CTC1-209ENST00000581729 EFCAB5A4FU69 1503 aa7.32□□□□□ -1.24
CTC1-209ENST00000581729 RAPGEF6Q8TEU7 1601 aa7.32□□□□□ -1.24
CTC1-209ENST00000581729 POTEMA6NI47 508 aa7.32□□□□□ -1.24
CTC1-209ENST00000581729 UHRF1BP1Q6BDS2 1440 aa7.32□□□□□ -1.24
CTC1-209ENST00000581729 MED1Q15648 1581 aaPredicted RBP7.32□□□□□ -1.24
CTC1-209ENST00000581729 ZNF335Q9H4Z2 1342 aaPredicted RBP7.31□□□□□ -1.24
CTC1-209ENST00000581729 PRXQ9BXM0 1461 aa7.31□□□□□ -1.24
CTC1-209ENST00000581729 SAMD9Q5K651 1589 aa7.3□□□□□ -1.24
CTC1-209ENST00000581729 NCOA1Q15788 1441 aa7.3□□□□□ -1.24
CTC1-209ENST00000581729 C9orf84Q5VXU9 1444 aa7.3□□□□□ -1.24
CTC1-209ENST00000581729 IQSEC2Q5JU85 1478 aa7.3□□□□□ -1.24
CTC1-209ENST00000581729 SCAPERQ9BY12 1400 aa7.29□□□□□ -1.24
CTC1-209ENST00000581729 ATP10AO60312 1499 aa7.29□□□□□ -1.24
CTC1-209ENST00000581729 MAGI2Q86UL8 1455 aa7.29□□□□□ -1.24
CTC1-209ENST00000581729 UBAP1LF5GYI3 381 aa7.28□□□□□ -1.24
CTC1-209ENST00000581729 HSPA1LP34931 641 aa7.28□□□□□ -1.24
CTC1-209ENST00000581729 PCDH10Q9P2E7 1040 aa7.28□□□□□ -1.24
CTC1-209ENST00000581729 C3P01024 1663 aa7.28□□□□□ -1.24
CTC1-209ENST00000581729 NCKAP5LQ9HCH0 1330 aa7.27□□□□□ -1.25
CTC1-209ENST00000581729 SRCAPQ6ZRS2 3230 aa7.26□□□□□ -1.25
CTC1-209ENST00000581729 CFAP74Q9C0B2 1584 aa7.26□□□□□ -1.25
CTC1-209ENST00000581729 POTEGQ6S5H5 508 aa7.26□□□□□ -1.25
CTC1-209ENST00000581729 CAMSAP1Q5T5Y3 1602 aa7.26□□□□□ -1.25
CTC1-209ENST00000581729 CDK13Q14004 1512 aaKnown RBP7.26□□□□□ -1.25
CTC1-209ENST00000581729 DIP2CQ9Y2E4 1556 aa7.25□□□□□ -1.25
CTC1-209ENST00000581729 C19orf67A6NJJ6 358 aa7.25□□□□□ -1.25
CTC1-209ENST00000581729 ZBTB12Q9Y330 459 aaPredicted RBP7.25□□□□□ -1.25
CTC1-209ENST00000581729 PLCH2O75038 1416 aa7.25□□□□□ -1.25
CTC1-209ENST00000581729 ABCA6Q8N139 1617 aa7.24□□□□□ -1.25
CTC1-209ENST00000581729 RANGAP1P46060 587 aaPredicted RBP7.24□□□□□ -1.25
CTC1-209ENST00000581729 AFAP1Q8N556 730 aa7.24□□□□□ -1.25
CTC1-209ENST00000581729 ALKQ9UM73 1620 aa7.23□□□□□ -1.25
CTC1-209ENST00000581729 PLEKHD1A6NEE1 506 aa7.23□□□□□ -1.25
CTC1-209ENST00000581729 SLC4A2P04920 1241 aa7.23□□□□□ -1.25
CTC1-209ENST00000581729 PRKAR2AP13861 404 aaKnown RBP7.23□□□□□ -1.25
CTC1-209ENST00000581729 TRAPPC8Q9Y2L5 1435 aa7.23□□□□□ -1.25
CTC1-209ENST00000581729 KDM5CP41229 1560 aa7.23□□□□□ -1.25
CTC1-209ENST00000581729 PIP4K2BP78356 416 aa7.22□□□□□ -1.25
CTC1-209ENST00000581729 SETD1BQ9UPS6 1966 aaKnown RBP7.21□□□□□ -1.26
CTC1-209ENST00000581729 KIF14Q15058 1648 aa7.21□□□□□ -1.26
CTC1-209ENST00000581729 RGS17Q9UGC6 210 aaPredicted RBP7.21□□□□□ -1.26
CTC1-209ENST00000581729 TCOF1Q13428 1488 aaKnown RBP7.2□□□□□ -1.26
CTC1-209ENST00000581729 ZNF518AQ6AHZ1 1483 aa7.2□□□□□ -1.26
CTC1-209ENST00000581729 REREQ9P2R6 1566 aa7.2□□□□□ -1.26
CTC1-209ENST00000581729 AGLP35573 1532 aa7.18□□□□□ -1.26
CTC1-209ENST00000581729 MYO3AQ8NEV4 1616 aa7.18□□□□□ -1.26
CTC1-209ENST00000581729 PLA2R1Q13018 1463 aa7.17□□□□□ -1.26
CTC1-209ENST00000581729 MLH3Q9UHC1 1453 aa7.17□□□□□ -1.26
CTC1-209ENST00000581729 ARHGAP5Q13017 1502 aa7.17□□□□□ -1.26
CTC1-209ENST00000581729 CEP170BQ9Y4F5 1589 aaPredicted RBP7.16□□□□□ -1.26
CTC1-209ENST00000581729 MYO5CQ9NQX4 1742 aa7.16□□□□□ -1.26
CTC1-209ENST00000581729 EFCAB2Q5VUJ9 269 aa7.16□□□□□ -1.26
CTC1-209ENST00000581729 ZMYM3Q14202 1370 aa7.16□□□□□ -1.26
CTC1-209ENST00000581729 NPATQ14207 1427 aa7.16□□□□□ -1.26
CTC1-209ENST00000581729 NEURL4Q96JN8 1562 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms