RNA–Protein interactions for RNA: ENST00000580107.1

MIR4648-201, Transcript of microRNA 4648, humanhuman

BASIC

Gene MIR4648, Length 72 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4648-201ENST00000580107 SCAF1Q9H7N4 1312 aaKnown RBP4.05□□□□□ -1.76
MIR4648-201ENST00000580107 SIGLEC1Q9BZZ2 1709 aa4.05□□□□□ -1.76
MIR4648-201ENST00000580107 PIP4K2BP78356 416 aa4.05□□□□□ -1.76
MIR4648-201ENST00000580107 ZMYM4Q5VZL5 1548 aa4.05□□□□□ -1.76
MIR4648-201ENST00000580107 ZFYVE16Q7Z3T8 1539 aa4.05□□□□□ -1.76
MIR4648-201ENST00000580107 TRAPPC8Q9Y2L5 1435 aa4.04□□□□□ -1.76
MIR4648-201ENST00000580107 PKD2Q13563 968 aa4.04□□□□□ -1.76
MIR4648-201ENST00000580107 ATP10AO60312 1499 aa4.04□□□□□ -1.76
MIR4648-201ENST00000580107 ATP10BO94823 1461 aa4.04□□□□□ -1.76
MIR4648-201ENST00000580107 GOLGA3Q08378 1498 aa4.04□□□□□ -1.76
MIR4648-201ENST00000580107 C3P01024 1663 aa4.03□□□□□ -1.76
MIR4648-201ENST00000580107 CAMSAP1Q5T5Y3 1602 aa4.03□□□□□ -1.77
MIR4648-201ENST00000580107 CFAP74Q9C0B2 1584 aa4.02□□□□□ -1.77
MIR4648-201ENST00000580107 NCKAP5LQ9HCH0 1330 aa4.02□□□□□ -1.77
MIR4648-201ENST00000580107 POTEAQ6S8J7 498 aa4.02□□□□□ -1.77
MIR4648-201ENST00000580107 ESF1Q9H501 851 aaKnown RBP4.02□□□□□ -1.77
MIR4648-201ENST00000580107 PTPRKQ15262 1439 aa4.02□□□□□ -1.77
MIR4648-201ENST00000580107 C9orf84Q5VXU9 1444 aa4.02□□□□□ -1.77
MIR4648-201ENST00000580107 HECW1Q76N89 1606 aa4.02□□□□□ -1.77
MIR4648-201ENST00000580107 PLA2R1Q13018 1463 aa4.01□□□□□ -1.77
MIR4648-201ENST00000580107 RAPGEF2Q9Y4G8 1499 aa4.01□□□□□ -1.77
MIR4648-201ENST00000580107 UPF1Q92900 1129 aaKnown RBP eCLIP4.01□□□□□ -1.77
MIR4648-201ENST00000580107 PPP6R1Q9UPN7 881 aa4.01□□□□□ -1.77
MIR4648-201ENST00000580107 CPS1P31327 1500 aa4□□□□□ -1.77
MIR4648-201ENST00000580107 PLEKHD1A6NEE1 506 aa4□□□□□ -1.77
MIR4648-201ENST00000580107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4□□□□□ -1.77
MIR4648-201ENST00000580107 HNRNPUL2Q1KMD3 747 aaKnown RBP4□□□□□ -1.77
MIR4648-201ENST00000580107 NPATQ14207 1427 aa4□□□□□ -1.77
MIR4648-201ENST00000580107 SUPT6HQ7KZ85 1726 aaKnown RBP4□□□□□ -1.77
MIR4648-201ENST00000580107 TCOF1Q13428 1488 aaKnown RBP3.99□□□□□ -1.77
MIR4648-201ENST00000580107 SCAPERQ9BY12 1400 aa3.99□□□□□ -1.77
MIR4648-201ENST00000580107 CNTLNQ9NXG0 1405 aa3.99□□□□□ -1.77
MIR4648-201ENST00000580107 ARID3CA6NKF2 412 aa3.99□□□□□ -1.77
MIR4648-201ENST00000580107 CTTNBP2Q8WZ74 1663 aa3.99□□□□□ -1.77
MIR4648-201ENST00000580107 AGLP35573 1532 aa3.99□□□□□ -1.77
MIR4648-201ENST00000580107 REREQ9P2R6 1566 aa3.98□□□□□ -1.77
MIR4648-201ENST00000580107 SHANK2Q9UPX8 1470 aa3.98□□□□□ -1.77
MIR4648-201ENST00000580107 ALKQ9UM73 1620 aa3.97□□□□□ -1.77
MIR4648-201ENST00000580107 FOXD1Q16676 465 aa3.97□□□□□ -1.77
MIR4648-201ENST00000580107 EFCAB2Q5VUJ9 269 aa3.97□□□□□ -1.77
MIR4648-201ENST00000580107 ZMYM3Q14202 1370 aa3.97□□□□□ -1.77
MIR4648-201ENST00000580107 MROH2AA6NES4 1674 aa3.97□□□□□ -1.77
MIR4648-201ENST00000580107 PLCH2O75038 1416 aa3.96□□□□□ -1.77
MIR4648-201ENST00000580107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.96□□□□□ -1.78
MIR4648-201ENST00000580107 SETD1AO15047 1707 aaKnown RBP3.96□□□□□ -1.78
MIR4648-201ENST00000580107 ZNF142P52746 1687 aaPredicted RBP3.96□□□□□ -1.78
MIR4648-201ENST00000580107 RAPGEF6Q8TEU7 1601 aa3.95□□□□□ -1.78
MIR4648-201ENST00000580107 ZNF518AQ6AHZ1 1483 aa3.95□□□□□ -1.78
MIR4648-201ENST00000580107 AFAP1Q8N556 730 aa3.95□□□□□ -1.78
MIR4648-201ENST00000580107 MYT1LQ9UL68 1186 aa3.95□□□□□ -1.78
MIR4648-201ENST00000580107 POLR1AO95602 1720 aaPredicted RBP3.95□□□□□ -1.78
MIR4648-201ENST00000580107 CEP170BQ9Y4F5 1589 aaPredicted RBP3.94□□□□□ -1.78
MIR4648-201ENST00000580107 MLH3Q9UHC1 1453 aa3.94□□□□□ -1.78
MIR4648-201ENST00000580107 ANKLE2Q86XL3 938 aa3.94□□□□□ -1.78
MIR4648-201ENST00000580107 P3H3Q8IVL6 736 aa3.94□□□□□ -1.78
MIR4648-201ENST00000580107 SENP3Q9H4L4 574 aaPredicted RBP3.94□□□□□ -1.78
MIR4648-201ENST00000580107 FAM135BQ49AJ0 1406 aa3.94□□□□□ -1.78
MIR4648-201ENST00000580107 KDM5CP41229 1560 aa3.93□□□□□ -1.78
MIR4648-201ENST00000580107 DIP2CQ9Y2E4 1556 aa3.93□□□□□ -1.78
MIR4648-201ENST00000580107 NUP153P49790 1475 aaKnown RBP3.93□□□□□ -1.78
MIR4648-201ENST00000580107 MYO3AQ8NEV4 1616 aa3.93□□□□□ -1.78
MIR4648-201ENST00000580107 ZNF772Q68DY9 489 aaPredicted RBP3.93□□□□□ -1.78
MIR4648-201ENST00000580107 VWDEQ8N2E2 1590 aa3.93□□□□□ -1.78
MIR4648-201ENST00000580107 A2ML1A8K2U0 1454 aa3.92□□□□□ -1.78
MIR4648-201ENST00000580107 DNMT1P26358 1616 aaKnown RBP3.92□□□□□ -1.78
MIR4648-201ENST00000580107 RNF17Q9BXT8 1623 aaKnown RBP3.92□□□□□ -1.78
MIR4648-201ENST00000580107 LRRC7Q96NW7 1537 aa3.92□□□□□ -1.78
MIR4648-201ENST00000580107 IFFO2Q5TF58 517 aa3.92□□□□□ -1.78
MIR4648-201ENST00000580107 THEMISQ8N1K5 641 aaPredicted RBP3.92□□□□□ -1.78
MIR4648-201ENST00000580107 ZRANB1Q9UGI0 708 aa3.92□□□□□ -1.78
MIR4648-201ENST00000580107 MYO5CQ9NQX4 1742 aa3.92□□□□□ -1.78
MIR4648-201ENST00000580107 MED14O60244 1454 aa3.92□□□□□ -1.78
MIR4648-201ENST00000580107 ABCA6Q8N139 1617 aa3.92□□□□□ -1.78
MIR4648-201ENST00000580107 SUPT5HO00267 1087 aaKnown RBP3.91□□□□□ -1.78
MIR4648-201ENST00000580107 RXRBP28702 533 aa3.91□□□□□ -1.78
MIR4648-201ENST00000580107 TRIM52Q96A61 297 aa3.91□□□□□ -1.78
MIR4648-201ENST00000580107 NEURL4Q96JN8 1562 aa3.91□□□□□ -1.78
MIR4648-201ENST00000580107 STRCP1A6NGW2 1772 aa3.91□□□□□ -1.78
MIR4648-201ENST00000580107 CDK12Q9NYV4 1490 aaPredicted RBP3.91□□□□□ -1.78
MIR4648-201ENST00000580107 SYNMO15061 1565 aa3.9□□□□□ -1.78
MIR4648-201ENST00000580107 SAMD9Q5K651 1589 aa3.9□□□□□ -1.78
MIR4648-201ENST00000580107 NPHP4O75161 1426 aaPredicted RBP3.9□□□□□ -1.78
MIR4648-201ENST00000580107 DEPDC5O75140 1603 aa3.9□□□□□ -1.79
MIR4648-201ENST00000580107 CLTCQ00610 1675 aaKnown RBP3.9□□□□□ -1.79
MIR4648-201ENST00000580107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.89□□□□□ -1.79
MIR4648-201ENST00000580107 JCADQ9P266 1359 aa3.89□□□□□ -1.79
MIR4648-201ENST00000580107 KIDINS220Q9ULH0 1771 aa3.89□□□□□ -1.79
MIR4648-201ENST00000580107 XIRP1Q702N8 1843 aaKnown RBP3.89□□□□□ -1.79
MIR4648-201ENST00000580107 RBM33Q96EV2 1170 aaKnown RBP3.89□□□□□ -1.79
MIR4648-201ENST00000580107 CDK11AQ9UQ88 783 aaPredicted RBP3.89□□□□□ -1.79
MIR4648-201ENST00000580107 CDK13Q14004 1512 aaKnown RBP3.89□□□□□ -1.79
MIR4648-201ENST00000580107 SPATA31A6Q5VVP1 1343 aa3.89□□□□□ -1.79
MIR4648-201ENST00000580107 IQGAP1P46940 1657 aa3.88□□□□□ -1.79
MIR4648-201ENST00000580107 PRXQ9BXM0 1461 aa3.88□□□□□ -1.79
MIR4648-201ENST00000580107 GGT6Q6P531 493 aa3.88□□□□□ -1.79
MIR4648-201ENST00000580107 CCDC125Q86Z20 511 aa3.88□□□□□ -1.79
MIR4648-201ENST00000580107 ROBO1Q9Y6N7 1651 aa3.87□□□□□ -1.79
MIR4648-201ENST00000580107 CDC42BPBQ9Y5S2 1711 aa3.87□□□□□ -1.79
MIR4648-201ENST00000580107 ARHGAP5Q13017 1502 aa3.87□□□□□ -1.79
MIR4648-201ENST00000580107 KDM5DQ9BY66 1539 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms