RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 MYOM3Q5VTT5 1437 aa24.57■■□□□ 1.52
CSNK1D-212ENST00000580061 ARHGAP5Q13017 1502 aa24.54■■□□□ 1.52
CSNK1D-212ENST00000580061 CFAP74Q9C0B2 1584 aa24.51■■□□□ 1.51
CSNK1D-212ENST00000580061 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
CSNK1D-212ENST00000580061 MIA2Q96PC5 1412 aa24.51■■□□□ 1.51
CSNK1D-212ENST00000580061 FANCAO15360 1455 aa24.5■■□□□ 1.51
CSNK1D-212ENST00000580061 FGD6Q6ZV73 1430 aa24.49■■□□□ 1.51
CSNK1D-212ENST00000580061 TEX14Q8IWB6 1497 aa24.49■■□□□ 1.51
CSNK1D-212ENST00000580061 EFCAB2Q5VUJ9 269 aa24.48■■□□□ 1.51
CSNK1D-212ENST00000580061 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
CSNK1D-212ENST00000580061 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
CSNK1D-212ENST00000580061 NEO1Q92859 1461 aa24.46■■□□□ 1.51
CSNK1D-212ENST00000580061 ZNF777Q9ULD5 760 aaPredicted RBP24.43■■□□□ 1.5
CSNK1D-212ENST00000580061 AKNAQ7Z591 1439 aa24.43■■□□□ 1.5
CSNK1D-212ENST00000580061 CAMSAP2Q08AD1 1489 aa24.42■■□□□ 1.5
CSNK1D-212ENST00000580061 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
CSNK1D-212ENST00000580061 RRBP1Q9P2E9 1410 aaKnown RBP24.42■■□□□ 1.5
CSNK1D-212ENST00000580061 ABCC1P33527 1531 aa24.4■■□□□ 1.5
CSNK1D-212ENST00000580061 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
CSNK1D-212ENST00000580061 PLEKHH2Q8IVE3 1493 aa24.38■■□□□ 1.49
CSNK1D-212ENST00000580061 ADGRL1O94910 1474 aa24.38■■□□□ 1.49
CSNK1D-212ENST00000580061 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
CSNK1D-212ENST00000580061 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
CSNK1D-212ENST00000580061 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
CSNK1D-212ENST00000580061 SCAPERQ9BY12 1400 aa24.34■■□□□ 1.49
CSNK1D-212ENST00000580061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.33■■□□□ 1.49
CSNK1D-212ENST00000580061 MBD5Q9P267 1494 aa24.32■■□□□ 1.48
CSNK1D-212ENST00000580061 ARHGEF5Q12774 1597 aa24.32■■□□□ 1.48
CSNK1D-212ENST00000580061 HNRNPMP52272 730 aaKnown RBP eCLIP24.31■■□□□ 1.485e-7■■■■□ 21.8
CSNK1D-212ENST00000580061 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
CSNK1D-212ENST00000580061 RICTORQ6R327 1708 aa24.3■■□□□ 1.48
CSNK1D-212ENST00000580061 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
CSNK1D-212ENST00000580061 DENND4BO75064 1496 aaPredicted RBP24.28■■□□□ 1.48
CSNK1D-212ENST00000580061 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
CSNK1D-212ENST00000580061 COL17A1Q9UMD9 1497 aaPredicted RBP24.27■■□□□ 1.48
CSNK1D-212ENST00000580061 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
CSNK1D-212ENST00000580061 FRMPD1Q5SYB0 1578 aa24.26■■□□□ 1.47
CSNK1D-212ENST00000580061 KDM6BO15054 1643 aa24.26■■□□□ 1.47
CSNK1D-212ENST00000580061 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
CSNK1D-212ENST00000580061 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
CSNK1D-212ENST00000580061 RSPH4AQ5TD94 716 aa24.25■■□□□ 1.47
CSNK1D-212ENST00000580061 ZNF518AQ6AHZ1 1483 aa24.25■■□□□ 1.47
CSNK1D-212ENST00000580061 ABCC5O15440 1437 aa24.23■■□□□ 1.47
CSNK1D-212ENST00000580061 DAPK1P53355 1430 aa24.23■■□□□ 1.47
CSNK1D-212ENST00000580061 KDM5CP41229 1560 aa24.23■■□□□ 1.47
CSNK1D-212ENST00000580061 RAPGEF3O95398 923 aa24.22■■□□□ 1.47
CSNK1D-212ENST00000580061 AFAP1Q8N556 730 aa24.21■■□□□ 1.47
CSNK1D-212ENST00000580061 MAST1Q9Y2H9 1570 aa24.18■■□□□ 1.46
CSNK1D-212ENST00000580061 ZMYM4Q5VZL5 1548 aa24.18■■□□□ 1.46
CSNK1D-212ENST00000580061 SHANK2Q9UPX8 1470 aa24.18■■□□□ 1.46
CSNK1D-212ENST00000580061 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
CSNK1D-212ENST00000580061 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
CSNK1D-212ENST00000580061 INO80Q9ULG1 1556 aaPredicted RBP24.16■■□□□ 1.46
CSNK1D-212ENST00000580061 TSPY4P0CV99 314 aa24.15■■□□□ 1.46
CSNK1D-212ENST00000580061 TSPY10P0CW01 314 aa24.15■■□□□ 1.46
CSNK1D-212ENST00000580061 ITGAEP38570 1179 aa24.15■■□□□ 1.46
CSNK1D-212ENST00000580061 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
CSNK1D-212ENST00000580061 KIDINS220Q9ULH0 1771 aa24.15■■□□□ 1.46
CSNK1D-212ENST00000580061 ADGBQ8N7X0 1667 aa24.15■■□□□ 1.46
CSNK1D-212ENST00000580061 MLH3Q9UHC1 1453 aa24.14■■□□□ 1.46
CSNK1D-212ENST00000580061 C9orf84Q5VXU9 1444 aa24.14■■□□□ 1.45
CSNK1D-212ENST00000580061 ZFYVE16Q7Z3T8 1539 aa24.14■■□□□ 1.45
CSNK1D-212ENST00000580061 SPAG9O60271 1321 aaKnown RBP24.13■■□□□ 1.45
CSNK1D-212ENST00000580061 RTEL1-TNFRSF6BF6WH68 1400 aa24.12■■□□□ 1.45
CSNK1D-212ENST00000580061 ATP7AQ04656 1500 aa24.12■■□□□ 1.45
CSNK1D-212ENST00000580061 MAGI2Q86UL8 1455 aa24.1■■□□□ 1.45
CSNK1D-212ENST00000580061 ADGRL2O95490 1459 aa24.09■■□□□ 1.45
CSNK1D-212ENST00000580061 CHIC2Q9UKJ5 165 aa24.08■■□□□ 1.45
CSNK1D-212ENST00000580061 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
CSNK1D-212ENST00000580061 ABCA6Q8N139 1617 aa24.06■■□□□ 1.44
CSNK1D-212ENST00000580061 MYT1LQ9UL68 1186 aa24.05■■□□□ 1.44
CSNK1D-212ENST00000580061 ROCK1Q13464 1354 aa24.04■■□□□ 1.44
CSNK1D-212ENST00000580061 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
CSNK1D-212ENST00000580061 NCOA1Q15788 1441 aa24.04■■□□□ 1.44
CSNK1D-212ENST00000580061 YEATS2Q9ULM3 1422 aa24.04■■□□□ 1.44
CSNK1D-212ENST00000580061 ANKRD30AQ9BXX3 1397 aa24.03■■□□□ 1.44
CSNK1D-212ENST00000580061 ARHGEF40Q8TER5 1519 aa24.03■■□□□ 1.44
CSNK1D-212ENST00000580061 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
CSNK1D-212ENST00000580061 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
CSNK1D-212ENST00000580061 KIF15Q9NS87 1388 aa23.98■■□□□ 1.43
CSNK1D-212ENST00000580061 DUOX2Q9NRD8 1548 aa23.96■■□□□ 1.43
CSNK1D-212ENST00000580061 ATP10AO60312 1499 aa23.96■■□□□ 1.43
CSNK1D-212ENST00000580061 REREQ9P2R6 1566 aa23.95■■□□□ 1.43
CSNK1D-212ENST00000580061 A2MP01023 1474 aa23.95■■□□□ 1.42
CSNK1D-212ENST00000580061 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
CSNK1D-212ENST00000580061 NAIPQ13075 1403 aa23.94■■□□□ 1.42
CSNK1D-212ENST00000580061 DHX29Q7Z478 1369 aaKnown RBP23.91■■□□□ 1.42
CSNK1D-212ENST00000580061 SIGLEC1Q9BZZ2 1709 aa23.91■■□□□ 1.42
CSNK1D-212ENST00000580061 PCGF6Q9BYE7 350 aa23.9■■□□□ 1.42
CSNK1D-212ENST00000580061 ERBINQ96RT1 1412 aa23.9■■□□□ 1.42
CSNK1D-212ENST00000580061 EIF2AK4Q9P2K8 1649 aaKnown RBP23.89■■□□□ 1.42
CSNK1D-212ENST00000580061 ANKRD50Q9ULJ7 1429 aa23.89■■□□□ 1.41
CSNK1D-212ENST00000580061 BCORL1Q5H9F3 1711 aa23.87■■□□□ 1.41
CSNK1D-212ENST00000580061 AGLP35573 1532 aa23.86■■□□□ 1.41
CSNK1D-212ENST00000580061 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
CSNK1D-212ENST00000580061 DEPDC5O75140 1603 aa23.8■■□□□ 1.4
CSNK1D-212ENST00000580061 RNF17Q9BXT8 1623 aaKnown RBP23.8■■□□□ 1.4
CSNK1D-212ENST00000580061 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
CSNK1D-212ENST00000580061 KIF3BO15066 747 aa23.78■■□□□ 1.4
CSNK1D-212ENST00000580061 UNC13BO14795 1591 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms