RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 MYOM3Q5VTT5 1437 aa20.1■□□□□ 0.81
CTC1-205ENST00000578537 PTPN23Q9H3S7 1636 aa20.08■□□□□ 0.8
CTC1-205ENST00000578537 SAMD9LQ8IVG5 1584 aa20.08■□□□□ 0.8
CTC1-205ENST00000578537 FGD6Q6ZV73 1430 aa20.06■□□□□ 0.8
CTC1-205ENST00000578537 CCNB3Q8WWL7 1395 aa20.06■□□□□ 0.8
CTC1-205ENST00000578537 ADGRL1O94910 1474 aa20.04■□□□□ 0.8
CTC1-205ENST00000578537 RRBP1Q9P2E9 1410 aaKnown RBP20.03■□□□□ 0.8
CTC1-205ENST00000578537 ARHGAP5Q13017 1502 aa20.03■□□□□ 0.8
CTC1-205ENST00000578537 ARAP3Q8WWN8 1544 aa20.03■□□□□ 0.8
CTC1-205ENST00000578537 PLCH2O75038 1416 aa20.02■□□□□ 0.79
CTC1-205ENST00000578537 CAMSAP2Q08AD1 1489 aa20.01■□□□□ 0.79
CTC1-205ENST00000578537 TCOF1Q13428 1488 aaKnown RBP20.01■□□□□ 0.79
CTC1-205ENST00000578537 CD109Q6YHK3 1445 aa20■□□□□ 0.79
CTC1-205ENST00000578537 ABCC1P33527 1531 aa19.99■□□□□ 0.79
CTC1-205ENST00000578537 CROCC2H7BZ55 1655 aa19.97■□□□□ 0.79
CTC1-205ENST00000578537 MIA2Q96PC5 1412 aa19.97■□□□□ 0.79
CTC1-205ENST00000578537 ZNF644Q9H582 1327 aaPredicted RBP19.97■□□□□ 0.79
CTC1-205ENST00000578537 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
CTC1-205ENST00000578537 CFAP74Q9C0B2 1584 aa19.96■□□□□ 0.79
CTC1-205ENST00000578537 FANCAO15360 1455 aa19.96■□□□□ 0.79
CTC1-205ENST00000578537 ARHGEF12Q9NZN5 1544 aa19.96■□□□□ 0.79
CTC1-205ENST00000578537 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
CTC1-205ENST00000578537 HECW2Q9P2P5 1572 aa19.94■□□□□ 0.78
CTC1-205ENST00000578537 COL17A1Q9UMD9 1497 aaPredicted RBP19.93■□□□□ 0.78
CTC1-205ENST00000578537 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
CTC1-205ENST00000578537 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
CTC1-205ENST00000578537 ARHGEF5Q12774 1597 aa19.89■□□□□ 0.77
CTC1-205ENST00000578537 RICTORQ6R327 1708 aa19.89■□□□□ 0.77
CTC1-205ENST00000578537 MBD5Q9P267 1494 aa19.89■□□□□ 0.77
CTC1-205ENST00000578537 NEO1Q92859 1461 aa19.88■□□□□ 0.77
CTC1-205ENST00000578537 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
CTC1-205ENST00000578537 AKNAQ7Z591 1439 aa19.87■□□□□ 0.77
CTC1-205ENST00000578537 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
CTC1-205ENST00000578537 TEX14Q8IWB6 1497 aa19.86■□□□□ 0.77
CTC1-205ENST00000578537 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
CTC1-205ENST00000578537 TRAPPC8Q9Y2L5 1435 aa19.85■□□□□ 0.77
CTC1-205ENST00000578537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.84■□□□□ 0.77
CTC1-205ENST00000578537 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
CTC1-205ENST00000578537 DAPK1P53355 1430 aa19.84■□□□□ 0.77
CTC1-205ENST00000578537 EFCAB2Q5VUJ9 269 aa19.83■□□□□ 0.77
CTC1-205ENST00000578537 ABCC5O15440 1437 aa19.83■□□□□ 0.76
CTC1-205ENST00000578537 PLEKHH2Q8IVE3 1493 aa19.82■□□□□ 0.76
CTC1-205ENST00000578537 KIAA1107Q9UPP5 1409 aa19.82■□□□□ 0.76
CTC1-205ENST00000578537 CCDC141Q6ZP82 1450 aa19.81■□□□□ 0.76
CTC1-205ENST00000578537 SCAPERQ9BY12 1400 aa19.81■□□□□ 0.76
CTC1-205ENST00000578537 KDM5CP41229 1560 aa19.81■□□□□ 0.76
CTC1-205ENST00000578537 INO80Q9ULG1 1556 aaPredicted RBP19.81■□□□□ 0.76
CTC1-205ENST00000578537 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
CTC1-205ENST00000578537 MAST1Q9Y2H9 1570 aa19.79■□□□□ 0.76
CTC1-205ENST00000578537 POGZQ7Z3K3 1410 aa19.79■□□□□ 0.76
CTC1-205ENST00000578537 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
CTC1-205ENST00000578537 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
CTC1-205ENST00000578537 ZFYVE16Q7Z3T8 1539 aa19.77■□□□□ 0.76
CTC1-205ENST00000578537 SHANK2Q9UPX8 1470 aa19.77■□□□□ 0.76
CTC1-205ENST00000578537 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
CTC1-205ENST00000578537 ITGAEP38570 1179 aa19.75■□□□□ 0.75
CTC1-205ENST00000578537 DENND4BO75064 1496 aaPredicted RBP19.74■□□□□ 0.75
CTC1-205ENST00000578537 ABCA6Q8N139 1617 aa19.74■□□□□ 0.75
CTC1-205ENST00000578537 ZMYM4Q5VZL5 1548 aa19.74■□□□□ 0.75
CTC1-205ENST00000578537 ATP7AQ04656 1500 aa19.73■□□□□ 0.75
CTC1-205ENST00000578537 C9orf84Q5VXU9 1444 aa19.73■□□□□ 0.75
CTC1-205ENST00000578537 PLXNC1O60486 1568 aa19.73■□□□□ 0.75
CTC1-205ENST00000578537 ZNF518AQ6AHZ1 1483 aa19.73■□□□□ 0.75
CTC1-205ENST00000578537 ADGRL2O95490 1459 aa19.72■□□□□ 0.75
CTC1-205ENST00000578537 AFAP1Q8N556 730 aa19.7■□□□□ 0.74
CTC1-205ENST00000578537 SIGLEC1Q9BZZ2 1709 aa19.69■□□□□ 0.74
CTC1-205ENST00000578537 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
CTC1-205ENST00000578537 DIP2CQ9Y2E4 1556 aa19.69■□□□□ 0.74
CTC1-205ENST00000578537 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
CTC1-205ENST00000578537 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
CTC1-205ENST00000578537 YEATS2Q9ULM3 1422 aa19.65■□□□□ 0.74
CTC1-205ENST00000578537 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
CTC1-205ENST00000578537 ARHGEF40Q8TER5 1519 aa19.65■□□□□ 0.74
CTC1-205ENST00000578537 FBXO41Q8TF61 875 aa19.64■□□□□ 0.73
CTC1-205ENST00000578537 NCOA1Q15788 1441 aa19.63■□□□□ 0.73
CTC1-205ENST00000578537 NAIPQ13075 1403 aa19.62■□□□□ 0.73
CTC1-205ENST00000578537 RTEL1-TNFRSF6BF6WH68 1400 aa19.61■□□□□ 0.73
CTC1-205ENST00000578537 ROCK1Q13464 1354 aa19.61■□□□□ 0.73
CTC1-205ENST00000578537 HFM1A2PYH4 1435 aa19.6■□□□□ 0.73
CTC1-205ENST00000578537 SPAG9O60271 1321 aaKnown RBP19.6■□□□□ 0.73
CTC1-205ENST00000578537 RRP7BPQ9NSQ0 103 aa19.6■□□□□ 0.73
CTC1-205ENST00000578537 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.72
CTC1-205ENST00000578537 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
CTC1-205ENST00000578537 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
CTC1-205ENST00000578537 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
CTC1-205ENST00000578537 MAGI2Q86UL8 1455 aa19.54■□□□□ 0.72
CTC1-205ENST00000578537 BCORL1Q5H9F3 1711 aa19.54■□□□□ 0.72
CTC1-205ENST00000578537 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
CTC1-205ENST00000578537 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
CTC1-205ENST00000578537 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
CTC1-205ENST00000578537 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
CTC1-205ENST00000578537 MROH1Q8NDA8 1641 aa19.53■□□□□ 0.72
CTC1-205ENST00000578537 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
CTC1-205ENST00000578537 SETD5Q9C0A6 1442 aa19.52■□□□□ 0.72
CTC1-205ENST00000578537 RAB3GAP2Q9H2M9 1393 aa19.52■□□□□ 0.72
CTC1-205ENST00000578537 A2MP01023 1474 aa19.52■□□□□ 0.72
CTC1-205ENST00000578537 UNC13BO14795 1591 aa19.52■□□□□ 0.71
CTC1-205ENST00000578537 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
CTC1-205ENST00000578537 PTPRMP28827 1452 aa19.5■□□□□ 0.71
CTC1-205ENST00000578537 RNF17Q9BXT8 1623 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms