RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
CTC1-205ENST00000578537 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
CTC1-205ENST00000578537 ABCC9O60706 1549 aa26.5■■□□□ 1.83
CTC1-205ENST00000578537 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
CTC1-205ENST00000578537 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
CTC1-205ENST00000578537 NACADO15069 1562 aa25.36■■□□□ 1.65
CTC1-205ENST00000578537 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
CTC1-205ENST00000578537 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
CTC1-205ENST00000578537 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
CTC1-205ENST00000578537 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
CTC1-205ENST00000578537 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
CTC1-205ENST00000578537 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
CTC1-205ENST00000578537 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
CTC1-205ENST00000578537 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
CTC1-205ENST00000578537 PABPN1Q86U42 306 aaKnown RBP eCLIP24.59■■□□□ 1.53
CTC1-205ENST00000578537 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
CTC1-205ENST00000578537 CC2D2AQ9P2K1 1620 aa23.96■■□□□ 1.43
CTC1-205ENST00000578537 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
CTC1-205ENST00000578537 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
CTC1-205ENST00000578537 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
CTC1-205ENST00000578537 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
CTC1-205ENST00000578537 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
CTC1-205ENST00000578537 WIZO95785 1651 aa23.67■■□□□ 1.38
CTC1-205ENST00000578537 DNAJC5Q9H3Z4 198 aa23.61■■□□□ 1.37
CTC1-205ENST00000578537 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
CTC1-205ENST00000578537 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
CTC1-205ENST00000578537 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
CTC1-205ENST00000578537 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
CTC1-205ENST00000578537 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
CTC1-205ENST00000578537 NCAPD3P42695 1498 aa23.37■■□□□ 1.33
CTC1-205ENST00000578537 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
CTC1-205ENST00000578537 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
CTC1-205ENST00000578537 CUX2O14529 1486 aa23.06■■□□□ 1.28
CTC1-205ENST00000578537 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
CTC1-205ENST00000578537 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
CTC1-205ENST00000578537 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
CTC1-205ENST00000578537 NESP48681 1621 aa22.81■■□□□ 1.24
CTC1-205ENST00000578537 CFTRP13569 1480 aa22.73■■□□□ 1.23
CTC1-205ENST00000578537 LAMC3Q9Y6N6 1575 aa22.72■■□□□ 1.23
CTC1-205ENST00000578537 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
CTC1-205ENST00000578537 KIF21AQ7Z4S6 1674 aa22.64■■□□□ 1.21
CTC1-205ENST00000578537 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
CTC1-205ENST00000578537 FANCD2Q9BXW9 1451 aa22.51■■□□□ 1.19
CTC1-205ENST00000578537 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
CTC1-205ENST00000578537 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
CTC1-205ENST00000578537 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
CTC1-205ENST00000578537 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
CTC1-205ENST00000578537 CUX1P39880 1505 aa22.34■■□□□ 1.17
CTC1-205ENST00000578537 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
CTC1-205ENST00000578537 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
CTC1-205ENST00000578537 BIVM-ERCC5R4GMW8 1640 aa22.3■■□□□ 1.16
CTC1-205ENST00000578537 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
CTC1-205ENST00000578537 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
CTC1-205ENST00000578537 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
CTC1-205ENST00000578537 TOP2BQ02880 1626 aa22.25■■□□□ 1.15
CTC1-205ENST00000578537 WDR62O43379 1518 aa22.25■■□□□ 1.15
CTC1-205ENST00000578537 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
CTC1-205ENST00000578537 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
CTC1-205ENST00000578537 FGD5Q6ZNL6 1462 aa22.13■■□□□ 1.13
CTC1-205ENST00000578537 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
CTC1-205ENST00000578537 WDR97A6NE52 1622 aa22.08■■□□□ 1.13
CTC1-205ENST00000578537 TARBP1Q13395 1621 aaKnown RBP22.03■■□□□ 1.12
CTC1-205ENST00000578537 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
CTC1-205ENST00000578537 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
CTC1-205ENST00000578537 SOGA1O94964 1423 aa21.9■■□□□ 1.1
CTC1-205ENST00000578537 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
CTC1-205ENST00000578537 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
CTC1-205ENST00000578537 RUSC2Q8N2Y8 1516 aa21.88■■□□□ 1.09
CTC1-205ENST00000578537 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
CTC1-205ENST00000578537 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
CTC1-205ENST00000578537 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
CTC1-205ENST00000578537 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
CTC1-205ENST00000578537 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
CTC1-205ENST00000578537 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.07
CTC1-205ENST00000578537 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
CTC1-205ENST00000578537 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
CTC1-205ENST00000578537 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
CTC1-205ENST00000578537 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
CTC1-205ENST00000578537 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
CTC1-205ENST00000578537 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
CTC1-205ENST00000578537 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
CTC1-205ENST00000578537 ADAMTS12P58397 1594 aa21.62■■□□□ 1.05
CTC1-205ENST00000578537 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
CTC1-205ENST00000578537 EEA1Q15075 1411 aa21.61■■□□□ 1.05
CTC1-205ENST00000578537 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
CTC1-205ENST00000578537 CUL7Q14999 1698 aa21.59■■□□□ 1.05
CTC1-205ENST00000578537 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
CTC1-205ENST00000578537 IGF1RP08069 1367 aa21.58■■□□□ 1.04
CTC1-205ENST00000578537 CHD1O14646 1710 aa21.54■■□□□ 1.04
CTC1-205ENST00000578537 KIF21BO75037 1637 aa21.53■■□□□ 1.04
CTC1-205ENST00000578537 PRXQ9BXM0 1461 aa21.52■■□□□ 1.03
CTC1-205ENST00000578537 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
CTC1-205ENST00000578537 CSRNP3Q8WYN3 585 aa21.48■■□□□ 1.03
CTC1-205ENST00000578537 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.03
CTC1-205ENST00000578537 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
CTC1-205ENST00000578537 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
CTC1-205ENST00000578537 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
CTC1-205ENST00000578537 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
CTC1-205ENST00000578537 GRIN2AQ12879 1464 aa21.39■■□□□ 1.01
CTC1-205ENST00000578537 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms