RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 SAMD9Q5K651 1589 aa11.48□□□□□ -0.57
CASC3-205ENST00000577605 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.57
CASC3-205ENST00000577605 GLI2P10070 1586 aa11.46□□□□□ -0.57
CASC3-205ENST00000577605 DIP2BQ9P265 1576 aa11.46□□□□□ -0.57
CASC3-205ENST00000577605 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
CASC3-205ENST00000577605 RANGAP1P46060 587 aaPredicted RBP11.43□□□□□ -0.58
CASC3-205ENST00000577605 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
CASC3-205ENST00000577605 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
CASC3-205ENST00000577605 ZCCHC11Q5TAX3 1644 aaKnown RBP11.42□□□□□ -0.58
CASC3-205ENST00000577605 ATP10BO94823 1461 aa11.41□□□□□ -0.58
CASC3-205ENST00000577605 TEX14Q8IWB6 1497 aa11.4□□□□□ -0.58
CASC3-205ENST00000577605 FHOD3Q2V2M9 1422 aa11.4□□□□□ -0.58
CASC3-205ENST00000577605 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
CASC3-205ENST00000577605 PLEKHD1A6NEE1 506 aa11.39□□□□□ -0.59
CASC3-205ENST00000577605 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
CASC3-205ENST00000577605 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
CASC3-205ENST00000577605 FKBP8Q14318 412 aa11.38□□□□□ -0.59
CASC3-205ENST00000577605 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
CASC3-205ENST00000577605 CDK11AQ9UQ88 783 aaPredicted RBP11.38□□□□□ -0.59
CASC3-205ENST00000577605 PHLDB1Q86UU1 1377 aa11.37□□□□□ -0.59
CASC3-205ENST00000577605 CD109Q6YHK3 1445 aa11.36□□□□□ -0.59
CASC3-205ENST00000577605 PROM2Q8N271 834 aa11.36□□□□□ -0.59
CASC3-205ENST00000577605 NUP153P49790 1475 aaKnown RBP11.36□□□□□ -0.59
CASC3-205ENST00000577605 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
CASC3-205ENST00000577605 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
CASC3-205ENST00000577605 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
CASC3-205ENST00000577605 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
CASC3-205ENST00000577605 MAP3K4Q9Y6R4 1608 aa11.33□□□□□ -0.6
CASC3-205ENST00000577605 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
CASC3-205ENST00000577605 KDM6BO15054 1643 aa11.31□□□□□ -0.6
CASC3-205ENST00000577605 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
CASC3-205ENST00000577605 CLIP1P30622 1438 aa11.31□□□□□ -0.6
CASC3-205ENST00000577605 CFAP43Q8NDM7 1665 aa11.3□□□□□ -0.6
CASC3-205ENST00000577605 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
CASC3-205ENST00000577605 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
CASC3-205ENST00000577605 CASKIN1Q8WXD9 1431 aa11.28□□□□□ -0.6
CASC3-205ENST00000577605 ABCA9Q8IUA7 1624 aa11.27□□□□□ -0.6
CASC3-205ENST00000577605 CCDC18Q5T9S5 1454 aa11.27□□□□□ -0.6
CASC3-205ENST00000577605 NEO1Q92859 1461 aa11.27□□□□□ -0.6
CASC3-205ENST00000577605 PPRC1Q5VV67 1664 aaKnown RBP11.26□□□□□ -0.61
CASC3-205ENST00000577605 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
CASC3-205ENST00000577605 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
CASC3-205ENST00000577605 TROQ12816 1431 aaPredicted RBP11.24□□□□□ -0.61
CASC3-205ENST00000577605 TSPOAP1O95153 1857 aa11.23□□□□□ -0.61
CASC3-205ENST00000577605 PLCH2O75038 1416 aa11.22□□□□□ -0.61
CASC3-205ENST00000577605 CDK13Q14004 1512 aaKnown RBP11.22□□□□□ -0.61
CASC3-205ENST00000577605 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
CASC3-205ENST00000577605 EFCAB2Q5VUJ9 269 aa11.22□□□□□ -0.61
CASC3-205ENST00000577605 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
CASC3-205ENST00000577605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.2□□□□□ -0.62
CASC3-205ENST00000577605 HAX1O00165 279 aa11.2□□□□□ -0.62
CASC3-205ENST00000577605 AKNAQ7Z591 1439 aa11.19□□□□□ -0.62
CASC3-205ENST00000577605 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
CASC3-205ENST00000577605 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
CASC3-205ENST00000577605 FANCAO15360 1455 aa11.19□□□□□ -0.62
CASC3-205ENST00000577605 DENND4BO75064 1496 aaPredicted RBP11.18□□□□□ -0.62
CASC3-205ENST00000577605 LOC105371045A0A1W2PR82 267 aa11.17□□□□□ -0.62
CASC3-205ENST00000577605 KIF14Q15058 1648 aa11.17□□□□□ -0.62
CASC3-205ENST00000577605 PCF11O94913 1555 aaKnown RBP11.16□□□□□ -0.62
CASC3-205ENST00000577605 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
CASC3-205ENST00000577605 RAPGEF3O95398 923 aa11.15□□□□□ -0.62
CASC3-205ENST00000577605 MAGI2Q86UL8 1455 aa11.14□□□□□ -0.63
CASC3-205ENST00000577605 MTUS2Q5JR59 1369 aa11.14□□□□□ -0.63
CASC3-205ENST00000577605 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
CASC3-205ENST00000577605 SCAPERQ9BY12 1400 aa11.13□□□□□ -0.63
CASC3-205ENST00000577605 ADGRL1O94910 1474 aa11.12□□□□□ -0.63
CASC3-205ENST00000577605 VPS8Q8N3P4 1428 aa11.12□□□□□ -0.63
CASC3-205ENST00000577605 KDM4FA0A1W2PPD8 638 aa11.11□□□□□ -0.63
CASC3-205ENST00000577605 ARHGAP5Q13017 1502 aa11.1□□□□□ -0.63
CASC3-205ENST00000577605 EVX2Q03828 476 aa11.1□□□□□ -0.63
CASC3-205ENST00000577605 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
CASC3-205ENST00000577605 POGZQ7Z3K3 1410 aa11.09□□□□□ -0.63
CASC3-205ENST00000577605 ZNF518AQ6AHZ1 1483 aa11.09□□□□□ -0.63
CASC3-205ENST00000577605 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
CASC3-205ENST00000577605 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
CASC3-205ENST00000577605 PLEKHH2Q8IVE3 1493 aa11.08□□□□□ -0.64
CASC3-205ENST00000577605 CFDP1Q9UEE9 299 aaPredicted RBP11.08□□□□□ -0.64
CASC3-205ENST00000577605 MYO5CQ9NQX4 1742 aa11.08□□□□□ -0.64
CASC3-205ENST00000577605 ZMYM4Q5VZL5 1548 aa11.08□□□□□ -0.64
CASC3-205ENST00000577605 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
CASC3-205ENST00000577605 EHBP1L1Q8N3D4 1523 aa11.07□□□□□ -0.64
CASC3-205ENST00000577605 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
CASC3-205ENST00000577605 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
CASC3-205ENST00000577605 RSPH4AQ5TD94 716 aa11.06□□□□□ -0.64
CASC3-205ENST00000577605 LRRIQ1Q96JM4 1722 aa11.06□□□□□ -0.64
CASC3-205ENST00000577605 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
CASC3-205ENST00000577605 FRMPD1Q5SYB0 1578 aa11.05□□□□□ -0.64
CASC3-205ENST00000577605 ARID4BQ4LE39 1312 aaPredicted RBP11.05□□□□□ -0.64
CASC3-205ENST00000577605 ZFYVE16Q7Z3T8 1539 aa11.04□□□□□ -0.64
CASC3-205ENST00000577605 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
CASC3-205ENST00000577605 PREX2Q70Z35 1606 aa11.04□□□□□ -0.64
CASC3-205ENST00000577605 ATP10AO60312 1499 aa11.04□□□□□ -0.64
CASC3-205ENST00000577605 MLH3Q9UHC1 1453 aa11.04□□□□□ -0.64
CASC3-205ENST00000577605 MIER1Q8N108 512 aa11.03□□□□□ -0.64
CASC3-205ENST00000577605 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
CASC3-205ENST00000577605 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
CASC3-205ENST00000577605 RICTORQ6R327 1708 aa11.03□□□□□ -0.64
CASC3-205ENST00000577605 ARHGEF40Q8TER5 1519 aa11.03□□□□□ -0.64
CASC3-205ENST00000577605 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
CASC3-205ENST00000577605 KDM5CP41229 1560 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms