RNA–Protein interactions for RNA: ENST00000577337.5

PGAP3-205, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-205ENST00000577337 FANCAO15360 1455 aa24.07■■□□□ 1.44
PGAP3-205ENST00000577337 CDC42BPBQ9Y5S2 1711 aa24.07■■□□□ 1.44
PGAP3-205ENST00000577337 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
PGAP3-205ENST00000577337 NEO1Q92859 1461 aa24.07■■□□□ 1.44
PGAP3-205ENST00000577337 ITSN2Q9NZM3 1697 aa24.06■■□□□ 1.44
PGAP3-205ENST00000577337 CFAP74Q9C0B2 1584 aa24.06■■□□□ 1.44
PGAP3-205ENST00000577337 PHLDB1Q86UU1 1377 aa24.05■■□□□ 1.44
PGAP3-205ENST00000577337 AKNAQ7Z591 1439 aa24.02■■□□□ 1.44
PGAP3-205ENST00000577337 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
PGAP3-205ENST00000577337 ZNF777Q9ULD5 760 aaPredicted RBP24.01■■□□□ 1.43
PGAP3-205ENST00000577337 ADGRL1O94910 1474 aa23.96■■□□□ 1.43
PGAP3-205ENST00000577337 MIA2Q96PC5 1412 aa23.96■■□□□ 1.43
PGAP3-205ENST00000577337 KDM6BO15054 1643 aa23.94■■□□□ 1.42
PGAP3-205ENST00000577337 SAMD9LQ8IVG5 1584 aa23.94■■□□□ 1.42
PGAP3-205ENST00000577337 PLEKHH2Q8IVE3 1493 aa23.93■■□□□ 1.42
PGAP3-205ENST00000577337 SCAPERQ9BY12 1400 aa23.93■■□□□ 1.42
PGAP3-205ENST00000577337 ZNF644Q9H582 1327 aaPredicted RBP23.92■■□□□ 1.42
PGAP3-205ENST00000577337 FGD6Q6ZV73 1430 aa23.92■■□□□ 1.42
PGAP3-205ENST00000577337 ABCC1P33527 1531 aa23.91■■□□□ 1.42
PGAP3-205ENST00000577337 COL17A1Q9UMD9 1497 aaPredicted RBP23.91■■□□□ 1.42
PGAP3-205ENST00000577337 DENND4BO75064 1496 aaPredicted RBP23.9■■□□□ 1.42
PGAP3-205ENST00000577337 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.42
PGAP3-205ENST00000577337 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.41
PGAP3-205ENST00000577337 RAPGEF3O95398 923 aa23.88■■□□□ 1.41
PGAP3-205ENST00000577337 PTPN23Q9H3S7 1636 aa23.88■■□□□ 1.41
PGAP3-205ENST00000577337 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
PGAP3-205ENST00000577337 SYCP2Q9BX26 1530 aa23.86■■□□□ 1.41
PGAP3-205ENST00000577337 ARHGEF12Q9NZN5 1544 aa23.86■■□□□ 1.41
PGAP3-205ENST00000577337 POGZQ7Z3K3 1410 aa23.84■■□□□ 1.41
PGAP3-205ENST00000577337 TCOF1Q13428 1488 aaKnown RBP23.83■■□□□ 1.41
PGAP3-205ENST00000577337 RICTORQ6R327 1708 aa23.82■■□□□ 1.4
PGAP3-205ENST00000577337 AFAP1Q8N556 730 aa23.82■■□□□ 1.4
PGAP3-205ENST00000577337 TRAPPC8Q9Y2L5 1435 aa23.82■■□□□ 1.4
PGAP3-205ENST00000577337 ZNF518AQ6AHZ1 1483 aa23.81■■□□□ 1.4
PGAP3-205ENST00000577337 MBD5Q9P267 1494 aa23.81■■□□□ 1.4
PGAP3-205ENST00000577337 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
PGAP3-205ENST00000577337 RSPH4AQ5TD94 716 aa23.81■■□□□ 1.4
PGAP3-205ENST00000577337 FRMPD1Q5SYB0 1578 aa23.8■■□□□ 1.4
PGAP3-205ENST00000577337 ARHGEF5Q12774 1597 aa23.78■■□□□ 1.4
PGAP3-205ENST00000577337 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
PGAP3-205ENST00000577337 CCDC141Q6ZP82 1450 aa23.76■■□□□ 1.39
PGAP3-205ENST00000577337 KDM5CP41229 1560 aa23.75■■□□□ 1.39
PGAP3-205ENST00000577337 MYT1LQ9UL68 1186 aa23.75■■□□□ 1.39
PGAP3-205ENST00000577337 ZMYM4Q5VZL5 1548 aa23.74■■□□□ 1.39
PGAP3-205ENST00000577337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.74■■□□□ 1.39
PGAP3-205ENST00000577337 TSPY4P0CV99 314 aa23.73■■□□□ 1.39
PGAP3-205ENST00000577337 TSPY10P0CW01 314 aa23.73■■□□□ 1.39
PGAP3-205ENST00000577337 SPAG9O60271 1321 aaKnown RBP23.73■■□□□ 1.39
PGAP3-205ENST00000577337 MAGI2Q86UL8 1455 aa23.72■■□□□ 1.39
PGAP3-205ENST00000577337 MLH3Q9UHC1 1453 aa23.7■■□□□ 1.38
PGAP3-205ENST00000577337 DNMT1P26358 1616 aaKnown RBP23.7■■□□□ 1.38
PGAP3-205ENST00000577337 HECW2Q9P2P5 1572 aa23.69■■□□□ 1.38
PGAP3-205ENST00000577337 ABCC5O15440 1437 aa23.69■■□□□ 1.38
PGAP3-205ENST00000577337 DAPK1P53355 1430 aa23.69■■□□□ 1.38
PGAP3-205ENST00000577337 ZFYVE16Q7Z3T8 1539 aa23.67■■□□□ 1.38
PGAP3-205ENST00000577337 RTEL1-TNFRSF6BF6WH68 1400 aa23.66■■□□□ 1.38
PGAP3-205ENST00000577337 ATP7AQ04656 1500 aa23.65■■□□□ 1.38
PGAP3-205ENST00000577337 KIDINS220Q9ULH0 1771 aa23.65■■□□□ 1.38
PGAP3-205ENST00000577337 INO80Q9ULG1 1556 aaPredicted RBP23.65■■□□□ 1.38
PGAP3-205ENST00000577337 CROCC2H7BZ55 1655 aa23.64■■□□□ 1.38
PGAP3-205ENST00000577337 SHANK2Q9UPX8 1470 aa23.64■■□□□ 1.38
PGAP3-205ENST00000577337 C9orf84Q5VXU9 1444 aa23.64■■□□□ 1.37
PGAP3-205ENST00000577337 YEATS2Q9ULM3 1422 aa23.64■■□□□ 1.37
PGAP3-205ENST00000577337 ITGAEP38570 1179 aa23.63■■□□□ 1.37
PGAP3-205ENST00000577337 MAST1Q9Y2H9 1570 aa23.63■■□□□ 1.37
PGAP3-205ENST00000577337 ARHGEF40Q8TER5 1519 aa23.63■■□□□ 1.37
PGAP3-205ENST00000577337 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
PGAP3-205ENST00000577337 ATP10AO60312 1499 aa23.59■■□□□ 1.37
PGAP3-205ENST00000577337 ABCA6Q8N139 1617 aa23.59■■□□□ 1.37
PGAP3-205ENST00000577337 DIP2CQ9Y2E4 1556 aa23.58■■□□□ 1.37
PGAP3-205ENST00000577337 PTPRKQ15262 1439 aa23.57■■□□□ 1.36
PGAP3-205ENST00000577337 ANKRD30AQ9BXX3 1397 aa23.55■■□□□ 1.36
PGAP3-205ENST00000577337 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
PGAP3-205ENST00000577337 ADGBQ8N7X0 1667 aa23.54■■□□□ 1.36
PGAP3-205ENST00000577337 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
PGAP3-205ENST00000577337 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
PGAP3-205ENST00000577337 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
PGAP3-205ENST00000577337 A2MP01023 1474 aa23.51■■□□□ 1.35
PGAP3-205ENST00000577337 ROCK1Q13464 1354 aa23.51■■□□□ 1.35
PGAP3-205ENST00000577337 KIF15Q9NS87 1388 aa23.51■■□□□ 1.35
PGAP3-205ENST00000577337 REREQ9P2R6 1566 aa23.5■■□□□ 1.35
PGAP3-205ENST00000577337 ARID4BQ4LE39 1312 aaPredicted RBP23.49■■□□□ 1.35
PGAP3-205ENST00000577337 DHX29Q7Z478 1369 aaKnown RBP23.49■■□□□ 1.35
PGAP3-205ENST00000577337 DUOX2Q9NRD8 1548 aa23.47■■□□□ 1.35
PGAP3-205ENST00000577337 AGLP35573 1532 aa23.43■■□□□ 1.34
PGAP3-205ENST00000577337 SIGLEC1Q9BZZ2 1709 aa23.43■■□□□ 1.34
PGAP3-205ENST00000577337 TRIM26Q12899 539 aaPredicted RBP23.42■■□□□ 1.34
PGAP3-205ENST00000577337 ERBINQ96RT1 1412 aa23.4■■□□□ 1.34
PGAP3-205ENST00000577337 KIF3BO15066 747 aa23.39■■□□□ 1.33
PGAP3-205ENST00000577337 ANKRD50Q9ULJ7 1429 aa23.39■■□□□ 1.33
PGAP3-205ENST00000577337 MLECQ14165 292 aa23.38■■□□□ 1.33
PGAP3-205ENST00000577337 EIF2AK4Q9P2K8 1649 aaKnown RBP23.37■■□□□ 1.33
PGAP3-205ENST00000577337 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
PGAP3-205ENST00000577337 NAIPQ13075 1403 aa23.35■■□□□ 1.33
PGAP3-205ENST00000577337 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
PGAP3-205ENST00000577337 GGT6Q6P531 493 aa23.34■■□□□ 1.33
PGAP3-205ENST00000577337 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
PGAP3-205ENST00000577337 RNF17Q9BXT8 1623 aaKnown RBP23.29■■□□□ 1.32
PGAP3-205ENST00000577337 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
PGAP3-205ENST00000577337 ESF1Q9H501 851 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms