RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
NPLOC4-219ENST00000576713 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
NPLOC4-219ENST00000576713 KDM5BQ9UGL1 1544 aa15.45■□□□□ 0.06
NPLOC4-219ENST00000576713 MAPKBP1O60336 1514 aa15.44■□□□□ 0.06
NPLOC4-219ENST00000576713 ZCCHC11Q5TAX3 1644 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-219ENST00000576713 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
NPLOC4-219ENST00000576713 RAPGEF6Q8TEU7 1601 aa15.42■□□□□ 0.06
NPLOC4-219ENST00000576713 NUP153P49790 1475 aaKnown RBP15.4■□□□□ 0.06
NPLOC4-219ENST00000576713 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
NPLOC4-219ENST00000576713 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
NPLOC4-219ENST00000576713 DIP2BQ9P265 1576 aa15.38■□□□□ 0.05
NPLOC4-219ENST00000576713 CLIP1P30622 1438 aa15.38■□□□□ 0.05
NPLOC4-219ENST00000576713 ASXL2Q76L83 1435 aa15.38■□□□□ 0.05
NPLOC4-219ENST00000576713 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
NPLOC4-219ENST00000576713 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
NPLOC4-219ENST00000576713 ATP10BO94823 1461 aa15.38■□□□□ 0.05
NPLOC4-219ENST00000576713 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
NPLOC4-219ENST00000576713 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
NPLOC4-219ENST00000576713 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
NPLOC4-219ENST00000576713 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
NPLOC4-219ENST00000576713 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
NPLOC4-219ENST00000576713 LRRIQ1Q96JM4 1722 aa15.32■□□□□ 0.04
NPLOC4-219ENST00000576713 FMN1Q68DA7 1419 aa15.32■□□□□ 0.04
NPLOC4-219ENST00000576713 CDK13Q14004 1512 aaKnown RBP15.32■□□□□ 0.04
NPLOC4-219ENST00000576713 WDR7Q9Y4E6 1490 aa15.31■□□□□ 0.04
NPLOC4-219ENST00000576713 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-219ENST00000576713 FAM69CQ0P6D2 419 aa15.3■□□□□ 0.04
NPLOC4-219ENST00000576713 SPOCK2Q92563 424 aa15.3■□□□□ 0.04
NPLOC4-219ENST00000576713 HECW1Q76N89 1606 aa15.27■□□□□ 0.03
NPLOC4-219ENST00000576713 GLI2P10070 1586 aa15.27■□□□□ 0.03
NPLOC4-219ENST00000576713 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
NPLOC4-219ENST00000576713 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
NPLOC4-219ENST00000576713 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
NPLOC4-219ENST00000576713 PPRC1Q5VV67 1664 aaKnown RBP15.25■□□□□ 0.03
NPLOC4-219ENST00000576713 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-219ENST00000576713 MAP3K4Q9Y6R4 1608 aa15.24■□□□□ 0.03
NPLOC4-219ENST00000576713 KCNH8Q96L42 1107 aa15.23■□□□□ 0.03
NPLOC4-219ENST00000576713 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
NPLOC4-219ENST00000576713 MAGI3Q5TCQ9 1506 aa15.21■□□□□ 0.03
NPLOC4-219ENST00000576713 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
NPLOC4-219ENST00000576713 ABCA9Q8IUA7 1624 aa15.17■□□□□ 0.02
NPLOC4-219ENST00000576713 KIF14Q15058 1648 aa15.16■□□□□ 0.02
NPLOC4-219ENST00000576713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.16■□□□□ 0.02
NPLOC4-219ENST00000576713 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
NPLOC4-219ENST00000576713 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
NPLOC4-219ENST00000576713 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-219ENST00000576713 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
NPLOC4-219ENST00000576713 PKD2Q13563 968 aa15.14■□□□□ 0.01
NPLOC4-219ENST00000576713 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
NPLOC4-219ENST00000576713 VPS8Q8N3P4 1428 aa15.14■□□□□ 0.01
NPLOC4-219ENST00000576713 KDM6BO15054 1643 aa15.14■□□□□ 0.01
NPLOC4-219ENST00000576713 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
NPLOC4-219ENST00000576713 TROQ12816 1431 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-219ENST00000576713 COL17A1Q9UMD9 1497 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-219ENST00000576713 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
NPLOC4-219ENST00000576713 CHADLQ6NUI6 762 aa15.08■□□□□ 0
NPLOC4-219ENST00000576713 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
NPLOC4-219ENST00000576713 NUBP1P53384 320 aa15.06■□□□□ 0
NPLOC4-219ENST00000576713 TEX14Q8IWB6 1497 aa15.06■□□□□ 0
NPLOC4-219ENST00000576713 TIAM1Q13009 1591 aa15.06■□□□□ 0
NPLOC4-219ENST00000576713 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
NPLOC4-219ENST00000576713 PLCH2O75038 1416 aa15.02■□□□□ -0
NPLOC4-219ENST00000576713 MYO5CQ9NQX4 1742 aa15.01□□□□□ -0.01
NPLOC4-219ENST00000576713 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
NPLOC4-219ENST00000576713 KANK4Q5T7N3 995 aaPredicted RBP15.01□□□□□ -0.01
NPLOC4-219ENST00000576713 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
NPLOC4-219ENST00000576713 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
NPLOC4-219ENST00000576713 FANCAO15360 1455 aa15.01□□□□□ -0.01
NPLOC4-219ENST00000576713 CDC42BPBQ9Y5S2 1711 aa15□□□□□ -0.01
NPLOC4-219ENST00000576713 MTUS2Q5JR59 1369 aa14.99□□□□□ -0.01
NPLOC4-219ENST00000576713 FRMPD1Q5SYB0 1578 aa14.99□□□□□ -0.01
NPLOC4-219ENST00000576713 CDC42BPAQ5VT25 1732 aa14.99□□□□□ -0.01
NPLOC4-219ENST00000576713 LRRC9Q6ZRR7 1453 aa14.99□□□□□ -0.01
NPLOC4-219ENST00000576713 NEO1Q92859 1461 aa14.99□□□□□ -0.01
NPLOC4-219ENST00000576713 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
NPLOC4-219ENST00000576713 ARAP3Q8WWN8 1544 aa14.98□□□□□ -0.01
NPLOC4-219ENST00000576713 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
NPLOC4-219ENST00000576713 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
NPLOC4-219ENST00000576713 AKNAQ7Z591 1439 aa14.97□□□□□ -0.01
NPLOC4-219ENST00000576713 GPATCH8Q9UKJ3 1502 aaKnown RBP14.97□□□□□ -0.01
NPLOC4-219ENST00000576713 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
NPLOC4-219ENST00000576713 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
NPLOC4-219ENST00000576713 ARHGAP5Q13017 1502 aa14.96□□□□□ -0.02
NPLOC4-219ENST00000576713 RAPGEF3O95398 923 aa14.95□□□□□ -0.02
NPLOC4-219ENST00000576713 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
NPLOC4-219ENST00000576713 CFAP74Q9C0B2 1584 aa14.94□□□□□ -0.02
NPLOC4-219ENST00000576713 GSE1Q14687 1217 aa14.94□□□□□ -0.02
NPLOC4-219ENST00000576713 ARHGEF12Q9NZN5 1544 aa14.93□□□□□ -0.02
NPLOC4-219ENST00000576713 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
NPLOC4-219ENST00000576713 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
NPLOC4-219ENST00000576713 ADGRL1O94910 1474 aa14.92□□□□□ -0.02
NPLOC4-219ENST00000576713 SAMD9LQ8IVG5 1584 aa14.92□□□□□ -0.02
NPLOC4-219ENST00000576713 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-219ENST00000576713 DCAF8Q5TAQ9 597 aa14.91□□□□□ -0.02
NPLOC4-219ENST00000576713 ABCC1P33527 1531 aa14.91□□□□□ -0.02
NPLOC4-219ENST00000576713 SCAPERQ9BY12 1400 aa14.91□□□□□ -0.02
NPLOC4-219ENST00000576713 PHLDB1Q86UU1 1377 aa14.9□□□□□ -0.02
NPLOC4-219ENST00000576713 EFCAB2Q5VUJ9 269 aa14.9□□□□□ -0.02
NPLOC4-219ENST00000576713 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-219ENST00000576713 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms