RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 SCAF1Q9H7N4 1312 aaKnown RBP26.3■■□□□ 1.8
SLC12A4-216ENST00000576377 HECW1Q76N89 1606 aa26.28■■□□□ 1.8
SLC12A4-216ENST00000576377 MAGI2Q86UL8 1455 aa26.27■■□□□ 1.8
SLC12A4-216ENST00000576377 PIP4K2BP78356 416 aa26.25■■□□□ 1.79
SLC12A4-216ENST00000576377 GOLGA3Q08378 1498 aa26.24■■□□□ 1.79
SLC12A4-216ENST00000576377 C3P01024 1663 aa26.23■■□□□ 1.79
SLC12A4-216ENST00000576377 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
SLC12A4-216ENST00000576377 CFAP74Q9C0B2 1584 aa26.2■■□□□ 1.79
SLC12A4-216ENST00000576377 CTTNBP2Q8WZ74 1663 aa26.2■■□□□ 1.78
SLC12A4-216ENST00000576377 CAMSAP1Q5T5Y3 1602 aa26.2■■□□□ 1.78
SLC12A4-216ENST00000576377 C9orf84Q5VXU9 1444 aa26.18■■□□□ 1.78
SLC12A4-216ENST00000576377 ATP10AO60312 1499 aa26.17■■□□□ 1.78
SLC12A4-216ENST00000576377 RGS17Q9UGC6 210 aaPredicted RBP26.16■■□□□ 1.78
SLC12A4-216ENST00000576377 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
SLC12A4-216ENST00000576377 TRAPPC8Q9Y2L5 1435 aa26.09■■□□□ 1.77
SLC12A4-216ENST00000576377 TOM1O60784 492 aa26.02■■□□□ 1.76
SLC12A4-216ENST00000576377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.762e-8■■■□□ 16.4
SLC12A4-216ENST00000576377 ALKQ9UM73 1620 aa26.02■■□□□ 1.76
SLC12A4-216ENST00000576377 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
SLC12A4-216ENST00000576377 SETD1AO15047 1707 aaKnown RBP26■■□□□ 1.75
SLC12A4-216ENST00000576377 SCAPERQ9BY12 1400 aa26■■□□□ 1.75
SLC12A4-216ENST00000576377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26■■□□□ 1.75
SLC12A4-216ENST00000576377 HNRNPUL2Q1KMD3 747 aaKnown RBP26■■□□□ 1.75
SLC12A4-216ENST00000576377 SRCAPQ6ZRS2 3230 aa25.99■■□□□ 1.75
SLC12A4-216ENST00000576377 RAPGEF6Q8TEU7 1601 aa25.99■■□□□ 1.75
SLC12A4-216ENST00000576377 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
SLC12A4-216ENST00000576377 P3H3Q8IVL6 736 aa25.95■■□□□ 1.74
SLC12A4-216ENST00000576377 TCOF1Q13428 1488 aaKnown RBP25.92■■□□□ 1.74
SLC12A4-216ENST00000576377 POTEAQ6S8J7 498 aa25.92■■□□□ 1.74
SLC12A4-216ENST00000576377 NUP153P49790 1475 aaKnown RBP25.91■■□□□ 1.74
SLC12A4-216ENST00000576377 PLA2R1Q13018 1463 aa25.91■■□□□ 1.74
SLC12A4-216ENST00000576377 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
SLC12A4-216ENST00000576377 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
SLC12A4-216ENST00000576377 PKD2Q13563 968 aa25.87■■□□□ 1.73
SLC12A4-216ENST00000576377 SUPT6HQ7KZ85 1726 aaKnown RBP25.87■■□□□ 1.73
SLC12A4-216ENST00000576377 CPS1P31327 1500 aa25.87■■□□□ 1.73
SLC12A4-216ENST00000576377 ZNF142P52746 1687 aaPredicted RBP25.87■■□□□ 1.73
SLC12A4-216ENST00000576377 REREQ9P2R6 1566 aa25.84■■□□□ 1.73
SLC12A4-216ENST00000576377 NPATQ14207 1427 aa25.82■■□□□ 1.72
SLC12A4-216ENST00000576377 MYO3AQ8NEV4 1616 aa25.82■■□□□ 1.72
SLC12A4-216ENST00000576377 FAM9AQ8IZU1 332 aaPredicted RBP25.82■■□□□ 1.72
SLC12A4-216ENST00000576377 AGLP35573 1532 aa25.82■■□□□ 1.72
SLC12A4-216ENST00000576377 ESF1Q9H501 851 aaKnown RBP25.81■■□□□ 1.72
SLC12A4-216ENST00000576377 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
SLC12A4-216ENST00000576377 ABCA6Q8N139 1617 aa25.8■■□□□ 1.72
SLC12A4-216ENST00000576377 KDM5CP41229 1560 aa25.78■■□□□ 1.72
SLC12A4-216ENST00000576377 SHANK2Q9UPX8 1470 aa25.78■■□□□ 1.72
SLC12A4-216ENST00000576377 CEP170BQ9Y4F5 1589 aaPredicted RBP25.78■■□□□ 1.72
SLC12A4-216ENST00000576377 PLEKHD1A6NEE1 506 aa25.77■■□□□ 1.72
SLC12A4-216ENST00000576377 PLCH2O75038 1416 aa25.75■■□□□ 1.71
SLC12A4-216ENST00000576377 CNTLNQ9NXG0 1405 aa25.75■■□□□ 1.71
SLC12A4-216ENST00000576377 MROH2AA6NES4 1674 aa25.74■■□□□ 1.71
SLC12A4-216ENST00000576377 ZNF518AQ6AHZ1 1483 aa25.73■■□□□ 1.71
SLC12A4-216ENST00000576377 SAMD9Q5K651 1589 aa25.73■■□□□ 1.71
SLC12A4-216ENST00000576377 AFAP1Q8N556 730 aa25.69■■□□□ 1.7
SLC12A4-216ENST00000576377 NEURL4Q96JN8 1562 aa25.68■■□□□ 1.7
SLC12A4-216ENST00000576377 VWDEQ8N2E2 1590 aa25.67■■□□□ 1.7
SLC12A4-216ENST00000576377 UPF1Q92900 1129 aaKnown RBP eCLIP25.66■■□□□ 1.7
SLC12A4-216ENST00000576377 MYT1LQ9UL68 1186 aa25.65■■□□□ 1.7
SLC12A4-216ENST00000576377 ZMYM3Q14202 1370 aa25.65■■□□□ 1.7
SLC12A4-216ENST00000576377 POLR1AO95602 1720 aaPredicted RBP25.65■■□□□ 1.7
SLC12A4-216ENST00000576377 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
SLC12A4-216ENST00000576377 RNF17Q9BXT8 1623 aaKnown RBP25.59■■□□□ 1.69
SLC12A4-216ENST00000576377 EFCAB2Q5VUJ9 269 aa25.58■■□□□ 1.69
SLC12A4-216ENST00000576377 MLH3Q9UHC1 1453 aa25.57■■□□□ 1.68
SLC12A4-216ENST00000576377 DNMT1P26358 1616 aaKnown RBP25.56■■□□□ 1.68
SLC12A4-216ENST00000576377 CLTCQ00610 1675 aaKnown RBP25.55■■□□□ 1.68
SLC12A4-216ENST00000576377 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
SLC12A4-216ENST00000576377 STRCP1A6NGW2 1772 aa25.53■■□□□ 1.68
SLC12A4-216ENST00000576377 CDK13Q14004 1512 aaKnown RBP25.53■■□□□ 1.68
SLC12A4-216ENST00000576377 A2ML1A8K2U0 1454 aa25.51■■□□□ 1.67
SLC12A4-216ENST00000576377 LRRC7Q96NW7 1537 aa25.5■■□□□ 1.67
SLC12A4-216ENST00000576377 KIDINS220Q9ULH0 1771 aa25.48■■□□□ 1.67
SLC12A4-216ENST00000576377 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
SLC12A4-216ENST00000576377 SYNMO15061 1565 aa25.43■■□□□ 1.66
SLC12A4-216ENST00000576377 KIF14Q15058 1648 aa25.42■■□□□ 1.66
SLC12A4-216ENST00000576377 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
SLC12A4-216ENST00000576377 TRIM52Q96A61 297 aa25.35■■□□□ 1.65
SLC12A4-216ENST00000576377 ABCC1P33527 1531 aa25.34■■□□□ 1.65
SLC12A4-216ENST00000576377 NPHP4O75161 1426 aaPredicted RBP25.34■■□□□ 1.65
SLC12A4-216ENST00000576377 MED14O60244 1454 aa25.31■■□□□ 1.64
SLC12A4-216ENST00000576377 IQGAP1P46940 1657 aa25.31■■□□□ 1.64
SLC12A4-216ENST00000576377 CDC42BPBQ9Y5S2 1711 aa25.31■■□□□ 1.64
SLC12A4-216ENST00000576377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.31■■□□□ 1.64
SLC12A4-216ENST00000576377 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
SLC12A4-216ENST00000576377 XIRP1Q702N8 1843 aaKnown RBP25.29■■□□□ 1.64
SLC12A4-216ENST00000576377 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
SLC12A4-216ENST00000576377 ANKLE2Q86XL3 938 aa25.28■■□□□ 1.64
SLC12A4-216ENST00000576377 FAM135BQ49AJ0 1406 aa25.27■■□□□ 1.64
SLC12A4-216ENST00000576377 PLXNC1O60486 1568 aa25.23■■□□□ 1.63
SLC12A4-216ENST00000576377 ROBO1Q9Y6N7 1651 aa25.21■■□□□ 1.63
SLC12A4-216ENST00000576377 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
SLC12A4-216ENST00000576377 TNRQ92752 1358 aa25.19■■□□□ 1.62
SLC12A4-216ENST00000576377 PREX2Q70Z35 1606 aa25.17■■□□□ 1.62
SLC12A4-216ENST00000576377 GGT6Q6P531 493 aa25.17■■□□□ 1.62
SLC12A4-216ENST00000576377 SETBP1Q9Y6X0 1596 aa25.16■■□□□ 1.62
SLC12A4-216ENST00000576377 LRP6O75581 1613 aa25.15■■□□□ 1.62
SLC12A4-216ENST00000576377 FBXO31Q5XUX0 539 aaPredicted RBP25.14■■□□□ 1.62
SLC12A4-216ENST00000576377 ZC3H13Q5T200 1668 aaKnown RBP25.13■■□□□ 1.61
SLC12A4-216ENST00000576377 TROQ12816 1431 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms