RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
NPLOC4-210ENST00000572824 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
NPLOC4-210ENST00000572824 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
NPLOC4-210ENST00000572824 CFAP43Q8NDM7 1665 aa15.69■□□□□ 0.1
NPLOC4-210ENST00000572824 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
NPLOC4-210ENST00000572824 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
NPLOC4-210ENST00000572824 STAG3Q9UJ98 1225 aa15.66■□□□□ 0.1
NPLOC4-210ENST00000572824 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
NPLOC4-210ENST00000572824 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
NPLOC4-210ENST00000572824 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
NPLOC4-210ENST00000572824 KCNH8Q96L42 1107 aa15.64■□□□□ 0.09
NPLOC4-210ENST00000572824 ATP10BO94823 1461 aa15.64■□□□□ 0.09
NPLOC4-210ENST00000572824 TEX14Q8IWB6 1497 aa15.63■□□□□ 0.09
NPLOC4-210ENST00000572824 KIF21BO75037 1637 aa15.61■□□□□ 0.09
NPLOC4-210ENST00000572824 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
NPLOC4-210ENST00000572824 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
NPLOC4-210ENST00000572824 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
NPLOC4-210ENST00000572824 MAGI3Q5TCQ9 1506 aa15.59■□□□□ 0.09
NPLOC4-210ENST00000572824 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
NPLOC4-210ENST00000572824 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
NPLOC4-210ENST00000572824 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
NPLOC4-210ENST00000572824 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
NPLOC4-210ENST00000572824 SPDYE1Q8NFV5 336 aaPredicted RBP15.55■□□□□ 0.08
NPLOC4-210ENST00000572824 FRMPD1Q5SYB0 1578 aa15.54■□□□□ 0.08
NPLOC4-210ENST00000572824 EEA1Q15075 1411 aa15.54■□□□□ 0.08
NPLOC4-210ENST00000572824 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
NPLOC4-210ENST00000572824 TTC37Q6PGP7 1564 aa15.51■□□□□ 0.07
NPLOC4-210ENST00000572824 LRRIQ1Q96JM4 1722 aa15.49■□□□□ 0.07
NPLOC4-210ENST00000572824 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
NPLOC4-210ENST00000572824 HECW2Q9P2P5 1572 aa15.47■□□□□ 0.07
NPLOC4-210ENST00000572824 ARAP3Q8WWN8 1544 aa15.47■□□□□ 0.07
NPLOC4-210ENST00000572824 MIER1Q8N108 512 aa15.46■□□□□ 0.07
NPLOC4-210ENST00000572824 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
NPLOC4-210ENST00000572824 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
NPLOC4-210ENST00000572824 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.06
NPLOC4-210ENST00000572824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.45■□□□□ 0.06
NPLOC4-210ENST00000572824 RICTORQ6R327 1708 aa15.44■□□□□ 0.06
NPLOC4-210ENST00000572824 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
NPLOC4-210ENST00000572824 RAPGEF3O95398 923 aa15.43■□□□□ 0.06
NPLOC4-210ENST00000572824 KIF14Q15058 1648 aa15.41■□□□□ 0.06
NPLOC4-210ENST00000572824 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
NPLOC4-210ENST00000572824 NEO1Q92859 1461 aa15.4■□□□□ 0.06
NPLOC4-210ENST00000572824 ADAMTSL3P82987 1691 aa15.39■□□□□ 0.05
NPLOC4-210ENST00000572824 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
NPLOC4-210ENST00000572824 HECW1Q76N89 1606 aa15.38■□□□□ 0.05
NPLOC4-210ENST00000572824 MADDQ8WXG6 1647 aa15.38■□□□□ 0.05
NPLOC4-210ENST00000572824 ARHGEF40Q8TER5 1519 aa15.38■□□□□ 0.05
NPLOC4-210ENST00000572824 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
NPLOC4-210ENST00000572824 BCORL1Q5H9F3 1711 aa15.37■□□□□ 0.05
NPLOC4-210ENST00000572824 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
NPLOC4-210ENST00000572824 FANCAO15360 1455 aa15.35■□□□□ 0.05
NPLOC4-210ENST00000572824 PCF11O94913 1555 aaKnown RBP15.35■□□□□ 0.05
NPLOC4-210ENST00000572824 RIMS1Q86UR5 1692 aaKnown RBP15.34■□□□□ 0.05
NPLOC4-210ENST00000572824 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
NPLOC4-210ENST00000572824 MYO5CQ9NQX4 1742 aa15.33■□□□□ 0.04
NPLOC4-210ENST00000572824 AKNAQ7Z591 1439 aa15.33■□□□□ 0.04
NPLOC4-210ENST00000572824 CFAP74Q9C0B2 1584 aa15.32■□□□□ 0.04
NPLOC4-210ENST00000572824 YEATS2Q9ULM3 1422 aa15.32■□□□□ 0.04
NPLOC4-210ENST00000572824 PLEKHD1A6NEE1 506 aa15.31■□□□□ 0.04
NPLOC4-210ENST00000572824 DENND4BO75064 1496 aaPredicted RBP15.3■□□□□ 0.04
NPLOC4-210ENST00000572824 PTPRMP28827 1452 aa15.3■□□□□ 0.04
NPLOC4-210ENST00000572824 ZMYM4Q5VZL5 1548 aa15.3■□□□□ 0.04
NPLOC4-210ENST00000572824 SPOCK2Q92563 424 aa15.3■□□□□ 0.04
NPLOC4-210ENST00000572824 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
NPLOC4-210ENST00000572824 FMN1Q68DA7 1419 aa15.27■□□□□ 0.04
NPLOC4-210ENST00000572824 PHLDB1Q86UU1 1377 aa15.27■□□□□ 0.04
NPLOC4-210ENST00000572824 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
NPLOC4-210ENST00000572824 ZFYVE16Q7Z3T8 1539 aa15.27■□□□□ 0.03
NPLOC4-210ENST00000572824 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
NPLOC4-210ENST00000572824 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
NPLOC4-210ENST00000572824 POGZQ7Z3K3 1410 aa15.26■□□□□ 0.03
NPLOC4-210ENST00000572824 PLCH2O75038 1416 aa15.25■□□□□ 0.03
NPLOC4-210ENST00000572824 FER1L4A9Z1Z3 1794 aa15.24■□□□□ 0.03
NPLOC4-210ENST00000572824 SCAPERQ9BY12 1400 aa15.23■□□□□ 0.03
NPLOC4-210ENST00000572824 ARID4BQ4LE39 1312 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-210ENST00000572824 TROQ12816 1431 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-210ENST00000572824 PREX2Q70Z35 1606 aa15.21■□□□□ 0.03
NPLOC4-210ENST00000572824 CDC42BPAQ5VT25 1732 aa15.21■□□□□ 0.03
NPLOC4-210ENST00000572824 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.03
NPLOC4-210ENST00000572824 ARHGAP5Q13017 1502 aa15.21■□□□□ 0.03
NPLOC4-210ENST00000572824 ABCA6Q8N139 1617 aa15.19■□□□□ 0.02
NPLOC4-210ENST00000572824 LMTK3Q96Q04 1460 aa15.19■□□□□ 0.02
NPLOC4-210ENST00000572824 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
NPLOC4-210ENST00000572824 ARHGEF12Q9NZN5 1544 aa15.18■□□□□ 0.02
NPLOC4-210ENST00000572824 KDM5CP41229 1560 aa15.18■□□□□ 0.02
NPLOC4-210ENST00000572824 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
NPLOC4-210ENST00000572824 DIP2CQ9Y2E4 1556 aa15.17■□□□□ 0.02
NPLOC4-210ENST00000572824 MLECQ14165 292 aa15.17■□□□□ 0.02
NPLOC4-210ENST00000572824 ABCC1P33527 1531 aa15.16■□□□□ 0.02
NPLOC4-210ENST00000572824 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-210ENST00000572824 PKD2Q13563 968 aa15.14■□□□□ 0.01
NPLOC4-210ENST00000572824 CLIP1P30622 1438 aa15.14■□□□□ 0.01
NPLOC4-210ENST00000572824 AFAP1Q8N556 730 aa15.13■□□□□ 0.01
NPLOC4-210ENST00000572824 TRAPPC8Q9Y2L5 1435 aa15.13■□□□□ 0.01
NPLOC4-210ENST00000572824 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
NPLOC4-210ENST00000572824 FYCO1Q9BQS8 1478 aa15.13■□□□□ 0.01
NPLOC4-210ENST00000572824 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
NPLOC4-210ENST00000572824 CCDC18Q5T9S5 1454 aa15.12■□□□□ 0.01
NPLOC4-210ENST00000572824 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
NPLOC4-210ENST00000572824 C9orf84Q5VXU9 1444 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms