RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 FAM69CQ0P6D2 419 aa31.29■■■□□ 2.6
TNFRSF12A-203ENST00000571351 PTPN23Q9H3S7 1636 aa31.29■■■□□ 2.6
TNFRSF12A-203ENST00000571351 CFDP1Q9UEE9 299 aaPredicted RBP31.29■■■□□ 2.6
TNFRSF12A-203ENST00000571351 ARAP3Q8WWN8 1544 aa31.27■■■□□ 2.6
TNFRSF12A-203ENST00000571351 CD109Q6YHK3 1445 aa31.27■■■□□ 2.6
TNFRSF12A-203ENST00000571351 TCOF1Q13428 1488 aaKnown RBP31.25■■■□□ 2.59
TNFRSF12A-203ENST00000571351 ARHGAP5Q13017 1502 aa31.25■■■□□ 2.59
TNFRSF12A-203ENST00000571351 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
TNFRSF12A-203ENST00000571351 SAMD9LQ8IVG5 1584 aa31.21■■■□□ 2.59
TNFRSF12A-203ENST00000571351 CAMSAP2Q08AD1 1489 aa31.19■■■□□ 2.58
TNFRSF12A-203ENST00000571351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.19■■■□□ 2.583e-6■■□□□ 13.5
TNFRSF12A-203ENST00000571351 ZNF777Q9ULD5 760 aaPredicted RBP31.18■■■□□ 2.58
TNFRSF12A-203ENST00000571351 PPRC1Q5VV67 1664 aaKnown RBP31.18■■■□□ 2.58
TNFRSF12A-203ENST00000571351 FAM50AQ14320 339 aaKnown RBP31.17■■■□□ 2.58
TNFRSF12A-203ENST00000571351 FANCAO15360 1455 aa31.17■■■□□ 2.58
TNFRSF12A-203ENST00000571351 TSPOAP1O95153 1857 aa31.15■■■□□ 2.58
TNFRSF12A-203ENST00000571351 EFCAB2Q5VUJ9 269 aa31.15■■■□□ 2.58
TNFRSF12A-203ENST00000571351 ABCC1P33527 1531 aa31.09■■■□□ 2.57
TNFRSF12A-203ENST00000571351 ARHGEF12Q9NZN5 1544 aa31.09■■■□□ 2.57
TNFRSF12A-203ENST00000571351 MBD5Q9P267 1494 aa31.08■■■□□ 2.57
TNFRSF12A-203ENST00000571351 SYCP2Q9BX26 1530 aa31.07■■■□□ 2.56
TNFRSF12A-203ENST00000571351 CFAP74Q9C0B2 1584 aa31.06■■■□□ 2.56
TNFRSF12A-203ENST00000571351 AKNAQ7Z591 1439 aa31.06■■■□□ 2.56
TNFRSF12A-203ENST00000571351 KIAA1107Q9UPP5 1409 aa31.06■■■□□ 2.56
TNFRSF12A-203ENST00000571351 DNMT1P26358 1616 aaKnown RBP31.05■■■□□ 2.56
TNFRSF12A-203ENST00000571351 NEO1Q92859 1461 aa31.05■■■□□ 2.56
TNFRSF12A-203ENST00000571351 PLEKHH2Q8IVE3 1493 aa31.04■■■□□ 2.56
TNFRSF12A-203ENST00000571351 PTPRKQ15262 1439 aa31.04■■■□□ 2.56
TNFRSF12A-203ENST00000571351 HNRNPMP52272 730 aaKnown RBP eCLIP31.03■■■□□ 2.56
TNFRSF12A-203ENST00000571351 TRHP20396 242 aaPredicted RBP31.03■■■□□ 2.56
TNFRSF12A-203ENST00000571351 ADGRL1O94910 1474 aa31.02■■■□□ 2.56
TNFRSF12A-203ENST00000571351 ABCC5O15440 1437 aa31.02■■■□□ 2.56
TNFRSF12A-203ENST00000571351 ARHGEF5Q12774 1597 aa31.01■■■□□ 2.56
TNFRSF12A-203ENST00000571351 ITGAEP38570 1179 aa31■■■□□ 2.55
TNFRSF12A-203ENST00000571351 DAPK1P53355 1430 aa31■■■□□ 2.55
TNFRSF12A-203ENST00000571351 TEX14Q8IWB6 1497 aa30.99■■■□□ 2.55
TNFRSF12A-203ENST00000571351 CROCC2H7BZ55 1655 aa30.97■■■□□ 2.55
TNFRSF12A-203ENST00000571351 SCAPERQ9BY12 1400 aa30.97■■■□□ 2.55
TNFRSF12A-203ENST00000571351 TRAPPC8Q9Y2L5 1435 aa30.96■■■□□ 2.55
TNFRSF12A-203ENST00000571351 CCDC141Q6ZP82 1450 aa30.94■■■□□ 2.54
TNFRSF12A-203ENST00000571351 RSPH4AQ5TD94 716 aa30.9■■■□□ 2.54
TNFRSF12A-203ENST00000571351 SHANK2Q9UPX8 1470 aa30.88■■■□□ 2.53
TNFRSF12A-203ENST00000571351 AFAP1Q8N556 730 aa30.87■■■□□ 2.53
TNFRSF12A-203ENST00000571351 POGZQ7Z3K3 1410 aa30.87■■■□□ 2.53
TNFRSF12A-203ENST00000571351 RICTORQ6R327 1708 aa30.85■■■□□ 2.53
TNFRSF12A-203ENST00000571351 CHIC2Q9UKJ5 165 aa30.85■■■□□ 2.53
TNFRSF12A-203ENST00000571351 DENND4BO75064 1496 aaPredicted RBP30.85■■■□□ 2.53
TNFRSF12A-203ENST00000571351 C9orf84Q5VXU9 1444 aa30.84■■■□□ 2.53
TNFRSF12A-203ENST00000571351 MAST1Q9Y2H9 1570 aa30.83■■■□□ 2.53
TNFRSF12A-203ENST00000571351 COL17A1Q9UMD9 1497 aaPredicted RBP30.83■■■□□ 2.53
TNFRSF12A-203ENST00000571351 ZNF518AQ6AHZ1 1483 aa30.83■■■□□ 2.53
TNFRSF12A-203ENST00000571351 KDM5CP41229 1560 aa30.82■■■□□ 2.52
TNFRSF12A-203ENST00000571351 FRMPD1Q5SYB0 1578 aa30.82■■■□□ 2.52
TNFRSF12A-203ENST00000571351 ADGBQ8N7X0 1667 aa30.81■■■□□ 2.52
TNFRSF12A-203ENST00000571351 RAPGEF3O95398 923 aa30.81■■■□□ 2.52
TNFRSF12A-203ENST00000571351 TSPY4P0CV99 314 aa30.81■■■□□ 2.52
TNFRSF12A-203ENST00000571351 TSPY10P0CW01 314 aa30.81■■■□□ 2.52
TNFRSF12A-203ENST00000571351 ADGRL2O95490 1459 aa30.8■■■□□ 2.52
TNFRSF12A-203ENST00000571351 ROCK1Q13464 1354 aa30.77■■■□□ 2.52
TNFRSF12A-203ENST00000571351 NCOA1Q15788 1441 aa30.77■■■□□ 2.52
TNFRSF12A-203ENST00000571351 ZFYVE16Q7Z3T8 1539 aa30.77■■■□□ 2.52
TNFRSF12A-203ENST00000571351 INO80Q9ULG1 1556 aaPredicted RBP30.77■■■□□ 2.52
TNFRSF12A-203ENST00000571351 SPAG9O60271 1321 aaKnown RBP30.74■■■□□ 2.51
TNFRSF12A-203ENST00000571351 KIDINS220Q9ULH0 1771 aa30.73■■■□□ 2.51
TNFRSF12A-203ENST00000571351 HFM1A2PYH4 1435 aa30.73■■■□□ 2.51
TNFRSF12A-203ENST00000571351 RTEL1-TNFRSF6BF6WH68 1400 aa30.73■■■□□ 2.51
TNFRSF12A-203ENST00000571351 RRP7BPQ9NSQ0 103 aa30.73■■■□□ 2.51
TNFRSF12A-203ENST00000571351 NAIPQ13075 1403 aa30.72■■■□□ 2.51
TNFRSF12A-203ENST00000571351 ATP7AQ04656 1500 aa30.72■■■□□ 2.51
TNFRSF12A-203ENST00000571351 MLH3Q9UHC1 1453 aa30.71■■■□□ 2.51
TNFRSF12A-203ENST00000571351 PLXNC1O60486 1568 aa30.71■■■□□ 2.51
TNFRSF12A-203ENST00000571351 ANKRD30AQ9BXX3 1397 aa30.7■■■□□ 2.51
TNFRSF12A-203ENST00000571351 HECW2Q9P2P5 1572 aa30.7■■■□□ 2.5
TNFRSF12A-203ENST00000571351 ZMYM4Q5VZL5 1548 aa30.69■■■□□ 2.5
TNFRSF12A-203ENST00000571351 GCC2Q8IWJ2 1684 aa30.69■■■□□ 2.5
TNFRSF12A-203ENST00000571351 SETD5Q9C0A6 1442 aa30.65■■■□□ 2.5
TNFRSF12A-203ENST00000571351 KIF15Q9NS87 1388 aa30.65■■■□□ 2.5
TNFRSF12A-203ENST00000571351 KDM6BO15054 1643 aa30.63■■■□□ 2.49
TNFRSF12A-203ENST00000571351 ABCA6Q8N139 1617 aa30.61■■■□□ 2.49
TNFRSF12A-203ENST00000571351 RAB3GAP2Q9H2M9 1393 aa30.6■■■□□ 2.49
TNFRSF12A-203ENST00000571351 YEATS2Q9ULM3 1422 aa30.59■■■□□ 2.49
TNFRSF12A-203ENST00000571351 DIP2CQ9Y2E4 1556 aa30.57■■■□□ 2.48
TNFRSF12A-203ENST00000571351 MAGI2Q86UL8 1455 aa30.57■■■□□ 2.48
TNFRSF12A-203ENST00000571351 MYT1LQ9UL68 1186 aa30.57■■■□□ 2.48
TNFRSF12A-203ENST00000571351 DUOX2Q9NRD8 1548 aa30.56■■■□□ 2.48
TNFRSF12A-203ENST00000571351 ANKRD50Q9ULJ7 1429 aa30.55■■■□□ 2.48
TNFRSF12A-203ENST00000571351 DHX29Q7Z478 1369 aaKnown RBP30.49■■■□□ 2.47
TNFRSF12A-203ENST00000571351 A2MP01023 1474 aa30.48■■■□□ 2.47
TNFRSF12A-203ENST00000571351 ERBINQ96RT1 1412 aa30.48■■■□□ 2.47
TNFRSF12A-203ENST00000571351 ARHGEF40Q8TER5 1519 aa30.48■■■□□ 2.47
TNFRSF12A-203ENST00000571351 HRCP23327 699 aa30.47■■■□□ 2.47
TNFRSF12A-203ENST00000571351 ATP10AO60312 1499 aa30.44■■■□□ 2.46
TNFRSF12A-203ENST00000571351 SIGLEC1Q9BZZ2 1709 aa30.41■■■□□ 2.46
TNFRSF12A-203ENST00000571351 EIF2AK4Q9P2K8 1649 aaKnown RBP30.41■■■□□ 2.46
TNFRSF12A-203ENST00000571351 REREQ9P2R6 1566 aa30.4■■■□□ 2.46
TNFRSF12A-203ENST00000571351 BCORL1Q5H9F3 1711 aa30.37■■■□□ 2.45
TNFRSF12A-203ENST00000571351 UNC13BO14795 1591 aa30.35■■■□□ 2.45
TNFRSF12A-203ENST00000571351 DEPDC5O75140 1603 aa30.35■■■□□ 2.45
TNFRSF12A-203ENST00000571351 KIF3BO15066 747 aa30.33■■■□□ 2.45
TNFRSF12A-203ENST00000571351 MROH1Q8NDA8 1641 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms