RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 CLIP1P30622 1438 aa12.94□□□□□ -0.34
RAB11A-209ENST00000569896 ABCA8O94911 1581 aa12.94□□□□□ -0.34
RAB11A-209ENST00000569896 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
RAB11A-209ENST00000569896 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
RAB11A-209ENST00000569896 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
RAB11A-209ENST00000569896 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
RAB11A-209ENST00000569896 FMN1Q68DA7 1419 aa12.91□□□□□ -0.34
RAB11A-209ENST00000569896 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
RAB11A-209ENST00000569896 HAX1O00165 279 aa12.9□□□□□ -0.34
RAB11A-209ENST00000569896 KDM5BQ9UGL1 1544 aa12.89□□□□□ -0.35
RAB11A-209ENST00000569896 KIF13AQ9H1H9 1805 aa12.89□□□□□ -0.35
RAB11A-209ENST00000569896 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
RAB11A-209ENST00000569896 HECW1Q76N89 1606 aa12.86□□□□□ -0.35
RAB11A-209ENST00000569896 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
RAB11A-209ENST00000569896 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
RAB11A-209ENST00000569896 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
RAB11A-209ENST00000569896 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
RAB11A-209ENST00000569896 ATP10BO94823 1461 aa12.84□□□□□ -0.35
RAB11A-209ENST00000569896 LRRIQ1Q96JM4 1722 aa12.84□□□□□ -0.35
RAB11A-209ENST00000569896 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
RAB11A-209ENST00000569896 FAM69CQ0P6D2 419 aa12.82□□□□□ -0.36
RAB11A-209ENST00000569896 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
RAB11A-209ENST00000569896 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
RAB11A-209ENST00000569896 ABCC10Q5T3U5 1492 aa12.81□□□□□ -0.36
RAB11A-209ENST00000569896 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
RAB11A-209ENST00000569896 WDR7Q9Y4E6 1490 aa12.8□□□□□ -0.36
RAB11A-209ENST00000569896 CDK13Q14004 1512 aaKnown RBP12.8□□□□□ -0.36
RAB11A-209ENST00000569896 EPRSP07814 1512 aaKnown RBP12.79□□□□□ -0.36
RAB11A-209ENST00000569896 PLEKHD1A6NEE1 506 aa12.79□□□□□ -0.36
RAB11A-209ENST00000569896 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
RAB11A-209ENST00000569896 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
RAB11A-209ENST00000569896 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
RAB11A-209ENST00000569896 PROM2Q8N271 834 aa12.76□□□□□ -0.37
RAB11A-209ENST00000569896 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
RAB11A-209ENST00000569896 GLI2P10070 1586 aa12.75□□□□□ -0.37
RAB11A-209ENST00000569896 CFAP43Q8NDM7 1665 aa12.75□□□□□ -0.37
RAB11A-209ENST00000569896 MAP3K4Q9Y6R4 1608 aa12.73□□□□□ -0.37
RAB11A-209ENST00000569896 FKBP8Q14318 412 aa12.73□□□□□ -0.37
RAB11A-209ENST00000569896 VPS8Q8N3P4 1428 aa12.73□□□□□ -0.37
RAB11A-209ENST00000569896 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
RAB11A-209ENST00000569896 ABCA9Q8IUA7 1624 aa12.7□□□□□ -0.38
RAB11A-209ENST00000569896 PPRC1Q5VV67 1664 aaKnown RBP12.7□□□□□ -0.38
RAB11A-209ENST00000569896 KIF14Q15058 1648 aa12.69□□□□□ -0.38
RAB11A-209ENST00000569896 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
RAB11A-209ENST00000569896 CREBZFQ9NS37 354 aa12.69□□□□□ -0.38
RAB11A-209ENST00000569896 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
RAB11A-209ENST00000569896 MYO5CQ9NQX4 1742 aa12.67□□□□□ -0.38
RAB11A-209ENST00000569896 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
RAB11A-209ENST00000569896 TEX14Q8IWB6 1497 aa12.66□□□□□ -0.38
RAB11A-209ENST00000569896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAB11A-209ENST00000569896 EVX2Q03828 476 aa12.66□□□□□ -0.38
RAB11A-209ENST00000569896 MTUS2Q5JR59 1369 aa12.66□□□□□ -0.38
RAB11A-209ENST00000569896 TIAM1Q13009 1591 aa12.66□□□□□ -0.38
RAB11A-209ENST00000569896 TTC37Q6PGP7 1564 aa12.66□□□□□ -0.38
RAB11A-209ENST00000569896 MAGI3Q5TCQ9 1506 aa12.65□□□□□ -0.38
RAB11A-209ENST00000569896 KDM6BO15054 1643 aa12.63□□□□□ -0.39
RAB11A-209ENST00000569896 SUPT6HQ7KZ85 1726 aaKnown RBP12.62□□□□□ -0.39
RAB11A-209ENST00000569896 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
RAB11A-209ENST00000569896 CDC42BPAQ5VT25 1732 aa12.61□□□□□ -0.39
RAB11A-209ENST00000569896 CDC42BPBQ9Y5S2 1711 aa12.6□□□□□ -0.39
RAB11A-209ENST00000569896 CFAP74Q9C0B2 1584 aa12.6□□□□□ -0.39
RAB11A-209ENST00000569896 MAP3K1Q13233 1512 aa12.59□□□□□ -0.39
RAB11A-209ENST00000569896 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
RAB11A-209ENST00000569896 ARHGAP5Q13017 1502 aa12.58□□□□□ -0.4
RAB11A-209ENST00000569896 PREX2Q70Z35 1606 aa12.58□□□□□ -0.4
RAB11A-209ENST00000569896 PLCH2O75038 1416 aa12.58□□□□□ -0.4
RAB11A-209ENST00000569896 FANCAO15360 1455 aa12.58□□□□□ -0.4
RAB11A-209ENST00000569896 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
RAB11A-209ENST00000569896 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
RAB11A-209ENST00000569896 EFCAB2Q5VUJ9 269 aa12.56□□□□□ -0.4
RAB11A-209ENST00000569896 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
RAB11A-209ENST00000569896 NEO1Q92859 1461 aa12.56□□□□□ -0.4
RAB11A-209ENST00000569896 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
RAB11A-209ENST00000569896 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
RAB11A-209ENST00000569896 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
RAB11A-209ENST00000569896 ARAP3Q8WWN8 1544 aa12.54□□□□□ -0.4
RAB11A-209ENST00000569896 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
RAB11A-209ENST00000569896 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
RAB11A-209ENST00000569896 NCOA2Q15596 1464 aa12.54□□□□□ -0.4
RAB11A-209ENST00000569896 MIER1Q8N108 512 aa12.52□□□□□ -0.41
RAB11A-209ENST00000569896 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.41
RAB11A-209ENST00000569896 GPATCH8Q9UKJ3 1502 aaKnown RBP12.51□□□□□ -0.41
RAB11A-209ENST00000569896 ADGRL1O94910 1474 aa12.51□□□□□ -0.41
RAB11A-209ENST00000569896 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
RAB11A-209ENST00000569896 RICTORQ6R327 1708 aa12.5□□□□□ -0.41
RAB11A-209ENST00000569896 DENND4BO75064 1496 aaPredicted RBP12.5□□□□□ -0.41
RAB11A-209ENST00000569896 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
RAB11A-209ENST00000569896 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
RAB11A-209ENST00000569896 PPARGC1BQ86YN6 1023 aaKnown RBP12.49□□□□□ -0.41
RAB11A-209ENST00000569896 SAMD9LQ8IVG5 1584 aa12.48□□□□□ -0.41
RAB11A-209ENST00000569896 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
RAB11A-209ENST00000569896 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
RAB11A-209ENST00000569896 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
RAB11A-209ENST00000569896 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
RAB11A-209ENST00000569896 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
RAB11A-209ENST00000569896 FRMPD1Q5SYB0 1578 aa12.45□□□□□ -0.42
RAB11A-209ENST00000569896 ABCC1P33527 1531 aa12.45□□□□□ -0.42
RAB11A-209ENST00000569896 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
RAB11A-209ENST00000569896 HNRNPMP52272 730 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB11A-209ENST00000569896 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms