RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 FOXD1Q16676 465 aa14.79□□□□□ -0.04
SNX29-208ENST00000569801 ARHGEF12Q9NZN5 1544 aa14.78□□□□□ -0.04
SNX29-208ENST00000569801 PPP6R1Q9UPN7 881 aa14.78□□□□□ -0.04
SNX29-208ENST00000569801 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.05
SNX29-208ENST00000569801 SIGLEC1Q9BZZ2 1709 aa14.76□□□□□ -0.05
SNX29-208ENST00000569801 PKD2Q13563 968 aa14.76□□□□□ -0.05
SNX29-208ENST00000569801 SETD1BQ9UPS6 1966 aaKnown RBP14.76□□□□□ -0.05
SNX29-208ENST00000569801 NEO1Q92859 1461 aa14.74□□□□□ -0.05
SNX29-208ENST00000569801 TRAPPC8Q9Y2L5 1435 aa14.72□□□□□ -0.05
SNX29-208ENST00000569801 CPS1P31327 1500 aa14.71□□□□□ -0.05
SNX29-208ENST00000569801 SLC34A2O95436 690 aa14.71□□□□□ -0.05
SNX29-208ENST00000569801 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
SNX29-208ENST00000569801 DENND4BO75064 1496 aaPredicted RBP14.68□□□□□ -0.06
SNX29-208ENST00000569801 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
SNX29-208ENST00000569801 RXRBP28702 533 aa14.65□□□□□ -0.06
SNX29-208ENST00000569801 SHANK2Q9UPX8 1470 aa14.64□□□□□ -0.07
SNX29-208ENST00000569801 ZFYVE16Q7Z3T8 1539 aa14.64□□□□□ -0.07
SNX29-208ENST00000569801 ZNF772Q68DY9 489 aaPredicted RBP14.63□□□□□ -0.07
SNX29-208ENST00000569801 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
SNX29-208ENST00000569801 TCOF1Q13428 1488 aaKnown RBP14.6□□□□□ -0.07
SNX29-208ENST00000569801 DISP1Q96F81 1524 aa14.6□□□□□ -0.07
SNX29-208ENST00000569801 EFCAB5A4FU69 1503 aa14.59□□□□□ -0.07
SNX29-208ENST00000569801 PLA2R1Q13018 1463 aa14.58□□□□□ -0.08
SNX29-208ENST00000569801 PCDH10Q9P2E7 1040 aa14.57□□□□□ -0.08
SNX29-208ENST00000569801 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
SNX29-208ENST00000569801 MAGI2Q86UL8 1455 aa14.56□□□□□ -0.08
SNX29-208ENST00000569801 ESF1Q9H501 851 aaKnown RBP14.54□□□□□ -0.08
SNX29-208ENST00000569801 ATP10AO60312 1499 aa14.53□□□□□ -0.08
SNX29-208ENST00000569801 CDK12Q9NYV4 1490 aaPredicted RBP14.53□□□□□ -0.08
SNX29-208ENST00000569801 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
SNX29-208ENST00000569801 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
SNX29-208ENST00000569801 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
SNX29-208ENST00000569801 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
SNX29-208ENST00000569801 ZMYM4Q5VZL5 1548 aa14.52□□□□□ -0.08
SNX29-208ENST00000569801 RICTORQ6R327 1708 aa14.52□□□□□ -0.09
SNX29-208ENST00000569801 C9orf84Q5VXU9 1444 aa14.51□□□□□ -0.09
SNX29-208ENST00000569801 ABCA9Q8IUA7 1624 aa14.51□□□□□ -0.09
SNX29-208ENST00000569801 C3P01024 1663 aa14.5□□□□□ -0.09
SNX29-208ENST00000569801 ARID3CA6NKF2 412 aa14.5□□□□□ -0.09
SNX29-208ENST00000569801 C1QTNF8P60827 252 aa14.48□□□□□ -0.09
SNX29-208ENST00000569801 MEX3CQ5U5Q3 659 aaKnown RBP14.47□□□□□ -0.09
SNX29-208ENST00000569801 LRP5O75197 1615 aa14.46□□□□□ -0.09
SNX29-208ENST00000569801 FAM135BQ49AJ0 1406 aa14.45□□□□□ -0.1
SNX29-208ENST00000569801 NPATQ14207 1427 aa14.43□□□□□ -0.1
SNX29-208ENST00000569801 IQGAP2Q13576 1575 aa14.43□□□□□ -0.1
SNX29-208ENST00000569801 HECW1Q76N89 1606 aa14.42□□□□□ -0.1
SNX29-208ENST00000569801 IGF1RP08069 1367 aa14.42□□□□□ -0.1
SNX29-208ENST00000569801 ATAD2Q6PL18 1390 aa14.41□□□□□ -0.1
SNX29-208ENST00000569801 RGS12O14924 1447 aa14.41□□□□□ -0.1
SNX29-208ENST00000569801 VWDEQ8N2E2 1590 aa14.4□□□□□ -0.1
SNX29-208ENST00000569801 RNF17Q9BXT8 1623 aaKnown RBP14.39□□□□□ -0.11
SNX29-208ENST00000569801 RAPGEF6Q8TEU7 1601 aa14.38□□□□□ -0.11
SNX29-208ENST00000569801 JCADQ9P266 1359 aa14.38□□□□□ -0.11
SNX29-208ENST00000569801 ZNF784Q8NCA9 323 aaPredicted RBP14.37□□□□□ -0.11
SNX29-208ENST00000569801 KIF27Q86VH2 1401 aa14.35□□□□□ -0.11
SNX29-208ENST00000569801 LRP6O75581 1613 aa14.35□□□□□ -0.11
SNX29-208ENST00000569801 ABCA8O94911 1581 aa14.34□□□□□ -0.11
SNX29-208ENST00000569801 CNTLNQ9NXG0 1405 aa14.32□□□□□ -0.12
SNX29-208ENST00000569801 ATP10BO94823 1461 aa14.32□□□□□ -0.12
SNX29-208ENST00000569801 CAPN15O75808 1086 aa14.32□□□□□ -0.12
SNX29-208ENST00000569801 CCDC125Q86Z20 511 aa14.32□□□□□ -0.12
SNX29-208ENST00000569801 HRCP23327 699 aa14.31□□□□□ -0.12
SNX29-208ENST00000569801 RBM6P78332 1123 aaKnown RBP14.31□□□□□ -0.12
SNX29-208ENST00000569801 ZMYM3Q14202 1370 aa14.31□□□□□ -0.12
SNX29-208ENST00000569801 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
SNX29-208ENST00000569801 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
SNX29-208ENST00000569801 SPATA31A6Q5VVP1 1343 aa14.3□□□□□ -0.12
SNX29-208ENST00000569801 SCAPERQ9BY12 1400 aa14.29□□□□□ -0.12
SNX29-208ENST00000569801 NEURL4Q96JN8 1562 aa14.28□□□□□ -0.12
SNX29-208ENST00000569801 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
SNX29-208ENST00000569801 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.13
SNX29-208ENST00000569801 ANKLE2Q86XL3 938 aa14.27□□□□□ -0.13
SNX29-208ENST00000569801 AFF2P51816 1311 aa14.26□□□□□ -0.13
SNX29-208ENST00000569801 QTRT2Q9H974 415 aaKnown RBP14.26□□□□□ -0.13
SNX29-208ENST00000569801 CARMIL1Q5VZK9 1371 aa14.25□□□□□ -0.13
SNX29-208ENST00000569801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNX29-208ENST00000569801 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
SNX29-208ENST00000569801 MYT1LQ9UL68 1186 aa14.24□□□□□ -0.13
SNX29-208ENST00000569801 CDK13Q14004 1512 aaKnown RBP14.24□□□□□ -0.13
SNX29-208ENST00000569801 AGLP35573 1532 aa14.23□□□□□ -0.13
SNX29-208ENST00000569801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.23□□□□□ -0.13
SNX29-208ENST00000569801 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
SNX29-208ENST00000569801 NHSL1Q5SYE7 1610 aa14.22□□□□□ -0.13
SNX29-208ENST00000569801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
SNX29-208ENST00000569801 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
SNX29-208ENST00000569801 NPHP4O75161 1426 aaPredicted RBP14.21□□□□□ -0.13
SNX29-208ENST00000569801 SUPT6HQ7KZ85 1726 aaKnown RBP14.2□□□□□ -0.14
SNX29-208ENST00000569801 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
SNX29-208ENST00000569801 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
SNX29-208ENST00000569801 DEFB132Q7Z7B7 95 aa14.19□□□□□ -0.14
SNX29-208ENST00000569801 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
SNX29-208ENST00000569801 NGLY1Q96IV0 654 aa14.18□□□□□ -0.14
SNX29-208ENST00000569801 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
SNX29-208ENST00000569801 SYNMO15061 1565 aa14.17□□□□□ -0.14
SNX29-208ENST00000569801 ROBO1Q9Y6N7 1651 aa14.16□□□□□ -0.14
SNX29-208ENST00000569801 STRCP1A6NGW2 1772 aa14.16□□□□□ -0.14
SNX29-208ENST00000569801 AFAP1Q8N556 730 aa14.14□□□□□ -0.15
SNX29-208ENST00000569801 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
SNX29-208ENST00000569801 PRELPP51888 382 aa14.13□□□□□ -0.15
SNX29-208ENST00000569801 MED14O60244 1454 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms