RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
CNOT1-207ENST00000565605 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
CNOT1-207ENST00000565605 NEO1Q92859 1461 aa15.63■□□□□ 0.09
CNOT1-207ENST00000565605 FRMPD1Q5SYB0 1578 aa15.62■□□□□ 0.09
CNOT1-207ENST00000565605 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
CNOT1-207ENST00000565605 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
CNOT1-207ENST00000565605 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
CNOT1-207ENST00000565605 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.08
CNOT1-207ENST00000565605 FMN1Q68DA7 1419 aa15.58■□□□□ 0.08
CNOT1-207ENST00000565605 MADDQ8WXG6 1647 aa15.57■□□□□ 0.08
CNOT1-207ENST00000565605 LMTK3Q96Q04 1460 aa15.57■□□□□ 0.08
CNOT1-207ENST00000565605 PCF11O94913 1555 aaKnown RBP15.56■□□□□ 0.08
CNOT1-207ENST00000565605 CLIP1P30622 1438 aa15.54■□□□□ 0.08
CNOT1-207ENST00000565605 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
CNOT1-207ENST00000565605 HSPA2P54652 639 aa15.53■□□□□ 0.08
CNOT1-207ENST00000565605 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.08
CNOT1-207ENST00000565605 AKNAQ7Z591 1439 aa15.52■□□□□ 0.08
CNOT1-207ENST00000565605 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.08
CNOT1-207ENST00000565605 ARHGEF40Q8TER5 1519 aa15.51■□□□□ 0.07
CNOT1-207ENST00000565605 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
CNOT1-207ENST00000565605 RICTORQ6R327 1708 aa15.5■□□□□ 0.07
CNOT1-207ENST00000565605 FANCAO15360 1455 aa15.5■□□□□ 0.07
CNOT1-207ENST00000565605 RIMS1Q86UR5 1692 aaKnown RBP15.5■□□□□ 0.07
CNOT1-207ENST00000565605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.49■□□□□ 0.07
CNOT1-207ENST00000565605 YEATS2Q9ULM3 1422 aa15.49■□□□□ 0.07
CNOT1-207ENST00000565605 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
CNOT1-207ENST00000565605 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
CNOT1-207ENST00000565605 CDK13Q14004 1512 aaKnown RBP15.46■□□□□ 0.07
CNOT1-207ENST00000565605 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
CNOT1-207ENST00000565605 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
CNOT1-207ENST00000565605 LOC105371045A0A1W2PR82 267 aa15.45■□□□□ 0.06
CNOT1-207ENST00000565605 MLECQ14165 292 aa15.45■□□□□ 0.06
CNOT1-207ENST00000565605 CASKIN1Q8WXD9 1431 aa15.44■□□□□ 0.06
CNOT1-207ENST00000565605 ZMYM4Q5VZL5 1548 aa15.44■□□□□ 0.06
CNOT1-207ENST00000565605 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
CNOT1-207ENST00000565605 APLP2Q06481 763 aa15.43■□□□□ 0.06
CNOT1-207ENST00000565605 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
CNOT1-207ENST00000565605 CDK11AQ9UQ88 783 aaPredicted RBP15.42■□□□□ 0.06
CNOT1-207ENST00000565605 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
CNOT1-207ENST00000565605 SCAPERQ9BY12 1400 aa15.41■□□□□ 0.06
CNOT1-207ENST00000565605 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
CNOT1-207ENST00000565605 MAGI2Q86UL8 1455 aa15.4■□□□□ 0.06
CNOT1-207ENST00000565605 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
CNOT1-207ENST00000565605 PLCH2O75038 1416 aa15.4■□□□□ 0.06
CNOT1-207ENST00000565605 CERKQ8TCT0 537 aa15.39■□□□□ 0.05
CNOT1-207ENST00000565605 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
CNOT1-207ENST00000565605 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
CNOT1-207ENST00000565605 ATP10AO60312 1499 aa15.35■□□□□ 0.05
CNOT1-207ENST00000565605 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
CNOT1-207ENST00000565605 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-207ENST00000565605 ARHGEF12Q9NZN5 1544 aa15.34■□□□□ 0.05
CNOT1-207ENST00000565605 LRRIQ1Q96JM4 1722 aa15.34■□□□□ 0.05
CNOT1-207ENST00000565605 FER1L4A9Z1Z3 1794 aa15.34■□□□□ 0.05
CNOT1-207ENST00000565605 EFCAB2Q5VUJ9 269 aa15.33■□□□□ 0.04
CNOT1-207ENST00000565605 KIF14Q15058 1648 aa15.32■□□□□ 0.04
CNOT1-207ENST00000565605 C9orf84Q5VXU9 1444 aa15.32■□□□□ 0.04
CNOT1-207ENST00000565605 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
CNOT1-207ENST00000565605 VPS8Q8N3P4 1428 aa15.27■□□□□ 0.04
CNOT1-207ENST00000565605 ZNF518AQ6AHZ1 1483 aa15.26■□□□□ 0.03
CNOT1-207ENST00000565605 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
CNOT1-207ENST00000565605 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
CNOT1-207ENST00000565605 STRCQ7RTU9 1775 aa15.25■□□□□ 0.03
CNOT1-207ENST00000565605 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
CNOT1-207ENST00000565605 ARHGAP5Q13017 1502 aa15.24■□□□□ 0.03
CNOT1-207ENST00000565605 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
CNOT1-207ENST00000565605 KDM5CP41229 1560 aa15.24■□□□□ 0.03
CNOT1-207ENST00000565605 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
CNOT1-207ENST00000565605 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
CNOT1-207ENST00000565605 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
CNOT1-207ENST00000565605 UHRF1BP1Q6BDS2 1440 aa15.22■□□□□ 0.03
CNOT1-207ENST00000565605 DIP2CQ9Y2E4 1556 aa15.22■□□□□ 0.03
CNOT1-207ENST00000565605 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
CNOT1-207ENST00000565605 TRAPPC8Q9Y2L5 1435 aa15.2■□□□□ 0.02
CNOT1-207ENST00000565605 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
CNOT1-207ENST00000565605 MLH3Q9UHC1 1453 aa15.19■□□□□ 0.02
CNOT1-207ENST00000565605 TIAM1Q13009 1591 aa15.19■□□□□ 0.02
CNOT1-207ENST00000565605 ABCA6Q8N139 1617 aa15.18■□□□□ 0.02
CNOT1-207ENST00000565605 REREQ9P2R6 1566 aa15.18■□□□□ 0.02
CNOT1-207ENST00000565605 PREX2Q70Z35 1606 aa15.17■□□□□ 0.02
CNOT1-207ENST00000565605 CDC42BPBQ9Y5S2 1711 aa15.17■□□□□ 0.02
CNOT1-207ENST00000565605 C3P01024 1663 aa15.16■□□□□ 0.02
CNOT1-207ENST00000565605 CCNB3Q8WWL7 1395 aa15.16■□□□□ 0.02
CNOT1-207ENST00000565605 PTPRTO14522 1441 aa15.16■□□□□ 0.02
CNOT1-207ENST00000565605 AGLP35573 1532 aa15.15■□□□□ 0.02
CNOT1-207ENST00000565605 SETD1BQ9UPS6 1966 aaKnown RBP15.15■□□□□ 0.02
CNOT1-207ENST00000565605 ABCC1P33527 1531 aa15.14■□□□□ 0.01
CNOT1-207ENST00000565605 MAP3K1Q13233 1512 aa15.13■□□□□ 0.01
CNOT1-207ENST00000565605 GPATCH8Q9UKJ3 1502 aaKnown RBP15.13■□□□□ 0.01
CNOT1-207ENST00000565605 ESF1Q9H501 851 aaKnown RBP15.13■□□□□ 0.01
CNOT1-207ENST00000565605 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
CNOT1-207ENST00000565605 SOCS7O14512 581 aa15.12■□□□□ 0.01
CNOT1-207ENST00000565605 CFDP1Q9UEE9 299 aaPredicted RBP15.12■□□□□ 0.01
CNOT1-207ENST00000565605 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
CNOT1-207ENST00000565605 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
CNOT1-207ENST00000565605 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
CNOT1-207ENST00000565605 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
CNOT1-207ENST00000565605 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
CNOT1-207ENST00000565605 NCOA1Q15788 1441 aa15.1■□□□□ 0.01
CNOT1-207ENST00000565605 ITSN2Q9NZM3 1697 aa15.1■□□□□ 0.01
CNOT1-207ENST00000565605 NCOA2Q15596 1464 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms