RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
AC009090.1-201ENST00000562409 ATN1P54259 1190 aaPredicted RBP14.11□□□□□ -0.15
AC009090.1-201ENST00000562409 IFNL1Q8IU54 200 aa14.11□□□□□ -0.15
AC009090.1-201ENST00000562409 CUX1P39880 1505 aa14.1□□□□□ -0.15
AC009090.1-201ENST00000562409 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
AC009090.1-201ENST00000562409 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.16
AC009090.1-201ENST00000562409 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
AC009090.1-201ENST00000562409 POTEFA5A3E0 1075 aa14.06□□□□□ -0.16
AC009090.1-201ENST00000562409 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
AC009090.1-201ENST00000562409 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
AC009090.1-201ENST00000562409 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
AC009090.1-201ENST00000562409 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
AC009090.1-201ENST00000562409 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
AC009090.1-201ENST00000562409 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
AC009090.1-201ENST00000562409 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
AC009090.1-201ENST00000562409 ARHGEF11O15085 1522 aa14.02□□□□□ -0.16
AC009090.1-201ENST00000562409 GRIN2BQ13224 1484 aa14.02□□□□□ -0.16
AC009090.1-201ENST00000562409 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.16
AC009090.1-201ENST00000562409 CHD1O14646 1710 aa14.01□□□□□ -0.17
AC009090.1-201ENST00000562409 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
AC009090.1-201ENST00000562409 PDAP1Q13442 181 aaKnown RBP14.01□□□□□ -0.17
AC009090.1-201ENST00000562409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
AC009090.1-201ENST00000562409 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
AC009090.1-201ENST00000562409 SCUBE2Q9NQ36 999 aa14□□□□□ -0.17
AC009090.1-201ENST00000562409 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
AC009090.1-201ENST00000562409 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
AC009090.1-201ENST00000562409 PSEN1P49768 467 aa13.99□□□□□ -0.17
AC009090.1-201ENST00000562409 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
AC009090.1-201ENST00000562409 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
AC009090.1-201ENST00000562409 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
AC009090.1-201ENST00000562409 STK25O00506 426 aa13.97□□□□□ -0.17
AC009090.1-201ENST00000562409 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
AC009090.1-201ENST00000562409 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
AC009090.1-201ENST00000562409 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
AC009090.1-201ENST00000562409 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
AC009090.1-201ENST00000562409 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
AC009090.1-201ENST00000562409 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
AC009090.1-201ENST00000562409 TIE1P35590 1138 aa13.9□□□□□ -0.18
AC009090.1-201ENST00000562409 HS6ST3Q8IZP7 471 aa13.9□□□□□ -0.18
AC009090.1-201ENST00000562409 COLQQ9Y215 455 aaPredicted RBP13.9□□□□□ -0.18
AC009090.1-201ENST00000562409 TOP2BQ02880 1626 aa13.9□□□□□ -0.19
AC009090.1-201ENST00000562409 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
AC009090.1-201ENST00000562409 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
AC009090.1-201ENST00000562409 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
AC009090.1-201ENST00000562409 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
AC009090.1-201ENST00000562409 CLASP1Q7Z460 1538 aa13.87□□□□□ -0.19
AC009090.1-201ENST00000562409 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
AC009090.1-201ENST00000562409 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
AC009090.1-201ENST00000562409 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
AC009090.1-201ENST00000562409 FHAD1B1AJZ9 1412 aa13.82□□□□□ -0.2
AC009090.1-201ENST00000562409 GRIN2AQ12879 1464 aa13.82□□□□□ -0.2
AC009090.1-201ENST00000562409 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
AC009090.1-201ENST00000562409 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
AC009090.1-201ENST00000562409 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
AC009090.1-201ENST00000562409 ERICH3Q5RHP9 1530 aa13.78□□□□□ -0.2
AC009090.1-201ENST00000562409 SEC24BO95487 1268 aa13.77□□□□□ -0.21
AC009090.1-201ENST00000562409 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
AC009090.1-201ENST00000562409 NUP160Q12769 1436 aa13.76□□□□□ -0.21
AC009090.1-201ENST00000562409 EFCAB3Q8N7B9 438 aa13.76□□□□□ -0.21
AC009090.1-201ENST00000562409 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.76□□□□□ -0.21
AC009090.1-201ENST00000562409 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
AC009090.1-201ENST00000562409 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
AC009090.1-201ENST00000562409 CEP170Q5SW79 1584 aa13.73□□□□□ -0.21
AC009090.1-201ENST00000562409 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
AC009090.1-201ENST00000562409 IGF1RP08069 1367 aa13.7□□□□□ -0.22
AC009090.1-201ENST00000562409 ST18O60284 1047 aa13.69□□□□□ -0.22
AC009090.1-201ENST00000562409 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
AC009090.1-201ENST00000562409 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
AC009090.1-201ENST00000562409 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
AC009090.1-201ENST00000562409 SLAIN1Q8ND83 568 aa13.67□□□□□ -0.22
AC009090.1-201ENST00000562409 SOX12O15370 315 aa13.66□□□□□ -0.22
AC009090.1-201ENST00000562409 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
AC009090.1-201ENST00000562409 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
AC009090.1-201ENST00000562409 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
AC009090.1-201ENST00000562409 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
AC009090.1-201ENST00000562409 MFRPQ9BY79 579 aa13.63□□□□□ -0.23
AC009090.1-201ENST00000562409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.63□□□□□ -0.23
AC009090.1-201ENST00000562409 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
AC009090.1-201ENST00000562409 NLRP6P59044 892 aa13.62□□□□□ -0.23
AC009090.1-201ENST00000562409 SPRYD3Q8NCJ5 442 aa13.62□□□□□ -0.23
AC009090.1-201ENST00000562409 IER5LQ5T953 404 aa13.61□□□□□ -0.23
AC009090.1-201ENST00000562409 RYDENQ9NUL5 291 aaKnown RBP13.6□□□□□ -0.23
AC009090.1-201ENST00000562409 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
AC009090.1-201ENST00000562409 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
AC009090.1-201ENST00000562409 CUL7Q14999 1698 aa13.58□□□□□ -0.24
AC009090.1-201ENST00000562409 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
AC009090.1-201ENST00000562409 PLCG2P16885 1265 aa13.56□□□□□ -0.24
AC009090.1-201ENST00000562409 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
AC009090.1-201ENST00000562409 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
AC009090.1-201ENST00000562409 FBXO22Q8NEZ5 403 aa13.55□□□□□ -0.24
AC009090.1-201ENST00000562409 OCEL1Q9H607 264 aa13.55□□□□□ -0.24
AC009090.1-201ENST00000562409 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
AC009090.1-201ENST00000562409 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
AC009090.1-201ENST00000562409 MS4A4AQ96JQ5 239 aa13.52□□□□□ -0.25
AC009090.1-201ENST00000562409 PTPRGP23470 1445 aa13.5□□□□□ -0.25
AC009090.1-201ENST00000562409 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
AC009090.1-201ENST00000562409 FAM69CQ0P6D2 419 aa13.5□□□□□ -0.25
AC009090.1-201ENST00000562409 SPNS2Q8IVW8 549 aa13.5□□□□□ -0.25
AC009090.1-201ENST00000562409 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
AC009090.1-201ENST00000562409 ILDR1Q86SU0 546 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms