RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 AEBP2Q6ZN18 517 aaPredicted RBP29.6■■■□□ 2.33
AC009090.1-201ENST00000562409 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
AC009090.1-201ENST00000562409 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
AC009090.1-201ENST00000562409 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
AC009090.1-201ENST00000562409 FOXD1Q16676 465 aa23.65■■□□□ 1.38
AC009090.1-201ENST00000562409 POTEDQ86YR6 584 aa22.85■■□□□ 1.25
AC009090.1-201ENST00000562409 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
AC009090.1-201ENST00000562409 MSH5O43196 834 aa22.2■■□□□ 1.14
AC009090.1-201ENST00000562409 PIAS4Q8N2W9 510 aaPredicted RBP21.92■■□□□ 1.1
AC009090.1-201ENST00000562409 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
AC009090.1-201ENST00000562409 ADRA2BP18089 450 aa21.61■■□□□ 1.05
AC009090.1-201ENST00000562409 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
AC009090.1-201ENST00000562409 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
AC009090.1-201ENST00000562409 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
AC009090.1-201ENST00000562409 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
AC009090.1-201ENST00000562409 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
AC009090.1-201ENST00000562409 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
AC009090.1-201ENST00000562409 KCNA4P22459 653 aa19.21■□□□□ 0.67
AC009090.1-201ENST00000562409 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
AC009090.1-201ENST00000562409 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
AC009090.1-201ENST00000562409 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
AC009090.1-201ENST00000562409 RNF39Q9H2S5 420 aa18.96■□□□□ 0.63
AC009090.1-201ENST00000562409 HOXD11P31277 338 aaPredicted RBP18.9■□□□□ 0.62
AC009090.1-201ENST00000562409 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
AC009090.1-201ENST00000562409 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
AC009090.1-201ENST00000562409 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
AC009090.1-201ENST00000562409 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
AC009090.1-201ENST00000562409 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
AC009090.1-201ENST00000562409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
AC009090.1-201ENST00000562409 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
AC009090.1-201ENST00000562409 POTEHQ6S545 545 aa17.75■□□□□ 0.43
AC009090.1-201ENST00000562409 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
AC009090.1-201ENST00000562409 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
AC009090.1-201ENST00000562409 ZBTB22O15209 634 aa17.65■□□□□ 0.42
AC009090.1-201ENST00000562409 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
AC009090.1-201ENST00000562409 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
AC009090.1-201ENST00000562409 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
AC009090.1-201ENST00000562409 DSG3P32926 999 aa17.59■□□□□ 0.41
AC009090.1-201ENST00000562409 CAPN15O75808 1086 aa17.55■□□□□ 0.4
AC009090.1-201ENST00000562409 ABCC9O60706 1549 aa17.4■□□□□ 0.38
AC009090.1-201ENST00000562409 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
AC009090.1-201ENST00000562409 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
AC009090.1-201ENST00000562409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
AC009090.1-201ENST00000562409 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
AC009090.1-201ENST00000562409 ABCB7O75027 752 aa17.19■□□□□ 0.34
AC009090.1-201ENST00000562409 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
AC009090.1-201ENST00000562409 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
AC009090.1-201ENST00000562409 APLP2Q06481 763 aa17.04■□□□□ 0.32
AC009090.1-201ENST00000562409 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
AC009090.1-201ENST00000562409 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
AC009090.1-201ENST00000562409 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
AC009090.1-201ENST00000562409 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
AC009090.1-201ENST00000562409 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
AC009090.1-201ENST00000562409 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
AC009090.1-201ENST00000562409 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
AC009090.1-201ENST00000562409 POLA2Q14181 598 aa16.54■□□□□ 0.24
AC009090.1-201ENST00000562409 NACADO15069 1562 aa16.47■□□□□ 0.23
AC009090.1-201ENST00000562409 SP7Q8TDD2 431 aaPredicted RBP16.33■□□□□ 0.2
AC009090.1-201ENST00000562409 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
AC009090.1-201ENST00000562409 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
AC009090.1-201ENST00000562409 FBLN2P98095 1184 aa16.25■□□□□ 0.19
AC009090.1-201ENST00000562409 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
AC009090.1-201ENST00000562409 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
AC009090.1-201ENST00000562409 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
AC009090.1-201ENST00000562409 PIP4P2Q8N4L2 257 aa16.16■□□□□ 0.18
AC009090.1-201ENST00000562409 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
AC009090.1-201ENST00000562409 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
AC009090.1-201ENST00000562409 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
AC009090.1-201ENST00000562409 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
AC009090.1-201ENST00000562409 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
AC009090.1-201ENST00000562409 BICRAQ9NZM4 1560 aa16.03■□□□□ 0.16
AC009090.1-201ENST00000562409 HAX1O00165 279 aa16.02■□□□□ 0.16
AC009090.1-201ENST00000562409 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
AC009090.1-201ENST00000562409 FKBP8Q14318 412 aa15.97■□□□□ 0.15
AC009090.1-201ENST00000562409 FXR2P51116 673 aaKnown RBP eCLIP15.92■□□□□ 0.14
AC009090.1-201ENST00000562409 EVX2Q03828 476 aa15.91■□□□□ 0.14
AC009090.1-201ENST00000562409 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
AC009090.1-201ENST00000562409 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
AC009090.1-201ENST00000562409 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
AC009090.1-201ENST00000562409 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
AC009090.1-201ENST00000562409 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
AC009090.1-201ENST00000562409 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
AC009090.1-201ENST00000562409 ZNF692Q9BU19 519 aaPredicted RBP15.8■□□□□ 0.12
AC009090.1-201ENST00000562409 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
AC009090.1-201ENST00000562409 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
AC009090.1-201ENST00000562409 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
AC009090.1-201ENST00000562409 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
AC009090.1-201ENST00000562409 PRKAR2AP13861 404 aaKnown RBP15.55■□□□□ 0.08
AC009090.1-201ENST00000562409 PROM2Q8N271 834 aa15.52■□□□□ 0.08
AC009090.1-201ENST00000562409 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
AC009090.1-201ENST00000562409 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
AC009090.1-201ENST00000562409 GABBR2O75899 941 aa15.4■□□□□ 0.06
AC009090.1-201ENST00000562409 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
AC009090.1-201ENST00000562409 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
AC009090.1-201ENST00000562409 LHX8Q68G74 356 aa15.34■□□□□ 0.05
AC009090.1-201ENST00000562409 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
AC009090.1-201ENST00000562409 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
AC009090.1-201ENST00000562409 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
AC009090.1-201ENST00000562409 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
AC009090.1-201ENST00000562409 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms