RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 PREX2Q70Z35 1606 aa17.91■□□□□ 0.46
HERC1-214ENST00000561400 PLCH2O75038 1416 aa17.89■□□□□ 0.46
HERC1-214ENST00000561400 PPRC1Q5VV67 1664 aaKnown RBP17.89■□□□□ 0.45
HERC1-214ENST00000561400 ITSN2Q9NZM3 1697 aa17.89■□□□□ 0.45
HERC1-214ENST00000561400 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
HERC1-214ENST00000561400 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
HERC1-214ENST00000561400 ARAP3Q8WWN8 1544 aa17.86■□□□□ 0.45
HERC1-214ENST00000561400 CFDP1Q9UEE9 299 aaPredicted RBP17.85■□□□□ 0.45
HERC1-214ENST00000561400 FANCAO15360 1455 aa17.83■□□□□ 0.45
HERC1-214ENST00000561400 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.44
HERC1-214ENST00000561400 MIA2Q96PC5 1412 aa17.82■□□□□ 0.44
HERC1-214ENST00000561400 ZNF644Q9H582 1327 aaPredicted RBP17.82■□□□□ 0.44
HERC1-214ENST00000561400 EFCAB2Q5VUJ9 269 aa17.82■□□□□ 0.44
HERC1-214ENST00000561400 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
HERC1-214ENST00000561400 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
HERC1-214ENST00000561400 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
HERC1-214ENST00000561400 TEX14Q8IWB6 1497 aa17.79■□□□□ 0.44
HERC1-214ENST00000561400 CFAP74Q9C0B2 1584 aa17.79■□□□□ 0.44
HERC1-214ENST00000561400 NEO1Q92859 1461 aa17.78■□□□□ 0.44
HERC1-214ENST00000561400 CAMSAP2Q08AD1 1489 aa17.77■□□□□ 0.44
HERC1-214ENST00000561400 AKNAQ7Z591 1439 aa17.77■□□□□ 0.44
HERC1-214ENST00000561400 RRBP1Q9P2E9 1410 aaKnown RBP17.77■□□□□ 0.44
HERC1-214ENST00000561400 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
HERC1-214ENST00000561400 ABCC1P33527 1531 aa17.75■□□□□ 0.43
HERC1-214ENST00000561400 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
HERC1-214ENST00000561400 ADGRL1O94910 1474 aa17.74■□□□□ 0.43
HERC1-214ENST00000561400 SYCP2Q9BX26 1530 aa17.73■□□□□ 0.43
HERC1-214ENST00000561400 FAM50AQ14320 339 aaKnown RBP17.73■□□□□ 0.43
HERC1-214ENST00000561400 HNRNPMP52272 730 aaKnown RBP eCLIP17.72■□□□□ 0.433e-6■■■■□ 21.8
HERC1-214ENST00000561400 SCAPERQ9BY12 1400 aa17.72■□□□□ 0.43
HERC1-214ENST00000561400 PLEKHH2Q8IVE3 1493 aa17.71■□□□□ 0.43
HERC1-214ENST00000561400 KIAA1107Q9UPP5 1409 aa17.71■□□□□ 0.43
HERC1-214ENST00000561400 MBD5Q9P267 1494 aa17.71■□□□□ 0.43
HERC1-214ENST00000561400 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
HERC1-214ENST00000561400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
HERC1-214ENST00000561400 TRAPPC8Q9Y2L5 1435 aa17.68■□□□□ 0.42
HERC1-214ENST00000561400 RICTORQ6R327 1708 aa17.67■□□□□ 0.42
HERC1-214ENST00000561400 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
HERC1-214ENST00000561400 DNMT1P26358 1616 aaKnown RBP17.67■□□□□ 0.42
HERC1-214ENST00000561400 DENND4BO75064 1496 aaPredicted RBP17.66■□□□□ 0.42
HERC1-214ENST00000561400 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
HERC1-214ENST00000561400 AFAP1Q8N556 730 aa17.66■□□□□ 0.42
HERC1-214ENST00000561400 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
HERC1-214ENST00000561400 POGZQ7Z3K3 1410 aa17.65■□□□□ 0.42
HERC1-214ENST00000561400 FRMPD1Q5SYB0 1578 aa17.65■□□□□ 0.42
HERC1-214ENST00000561400 ABCC5O15440 1437 aa17.64■□□□□ 0.41
HERC1-214ENST00000561400 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
HERC1-214ENST00000561400 KDM6BO15054 1643 aa17.64■□□□□ 0.41
HERC1-214ENST00000561400 DAPK1P53355 1430 aa17.64■□□□□ 0.41
HERC1-214ENST00000561400 CROCC2H7BZ55 1655 aa17.64■□□□□ 0.41
HERC1-214ENST00000561400 ZNF518AQ6AHZ1 1483 aa17.63■□□□□ 0.41
HERC1-214ENST00000561400 ITGAEP38570 1179 aa17.63■□□□□ 0.41
HERC1-214ENST00000561400 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
HERC1-214ENST00000561400 KDM5CP41229 1560 aa17.62■□□□□ 0.41
HERC1-214ENST00000561400 PTPRKQ15262 1439 aa17.62■□□□□ 0.41
HERC1-214ENST00000561400 HRCP23327 699 aa17.62■□□□□ 0.41
HERC1-214ENST00000561400 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
HERC1-214ENST00000561400 TSPY4P0CV99 314 aa17.57■□□□□ 0.4
HERC1-214ENST00000561400 TSPY10P0CW01 314 aa17.57■□□□□ 0.4
HERC1-214ENST00000561400 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
HERC1-214ENST00000561400 KIDINS220Q9ULH0 1771 aa17.57■□□□□ 0.4
HERC1-214ENST00000561400 C9orf84Q5VXU9 1444 aa17.57■□□□□ 0.4
HERC1-214ENST00000561400 ZMYM4Q5VZL5 1548 aa17.57■□□□□ 0.4
HERC1-214ENST00000561400 SPAG9O60271 1321 aaKnown RBP17.57■□□□□ 0.4
HERC1-214ENST00000561400 INO80Q9ULG1 1556 aaPredicted RBP17.57■□□□□ 0.4
HERC1-214ENST00000561400 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
HERC1-214ENST00000561400 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
HERC1-214ENST00000561400 HECW2Q9P2P5 1572 aa17.56■□□□□ 0.4
HERC1-214ENST00000561400 ZFYVE16Q7Z3T8 1539 aa17.56■□□□□ 0.4
HERC1-214ENST00000561400 MLH3Q9UHC1 1453 aa17.55■□□□□ 0.4
HERC1-214ENST00000561400 ATP7AQ04656 1500 aa17.55■□□□□ 0.4
HERC1-214ENST00000561400 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
HERC1-214ENST00000561400 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
HERC1-214ENST00000561400 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
HERC1-214ENST00000561400 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
HERC1-214ENST00000561400 ADGRL2O95490 1459 aa17.52■□□□□ 0.39
HERC1-214ENST00000561400 MAGI2Q86UL8 1455 aa17.51■□□□□ 0.39
HERC1-214ENST00000561400 NCOA1Q15788 1441 aa17.51■□□□□ 0.39
HERC1-214ENST00000561400 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
HERC1-214ENST00000561400 PLXNC1O60486 1568 aa17.5■□□□□ 0.39
HERC1-214ENST00000561400 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
HERC1-214ENST00000561400 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
HERC1-214ENST00000561400 ROCK1Q13464 1354 aa17.49■□□□□ 0.39
HERC1-214ENST00000561400 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
HERC1-214ENST00000561400 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
HERC1-214ENST00000561400 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
HERC1-214ENST00000561400 KIF15Q9NS87 1388 aa17.46■□□□□ 0.39
HERC1-214ENST00000561400 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
HERC1-214ENST00000561400 NAIPQ13075 1403 aa17.44■□□□□ 0.38
HERC1-214ENST00000561400 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
HERC1-214ENST00000561400 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
HERC1-214ENST00000561400 ATP10AO60312 1499 aa17.43■□□□□ 0.38
HERC1-214ENST00000561400 SIGLEC1Q9BZZ2 1709 aa17.42■□□□□ 0.38
HERC1-214ENST00000561400 A2MP01023 1474 aa17.42■□□□□ 0.38
HERC1-214ENST00000561400 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
HERC1-214ENST00000561400 DHX29Q7Z478 1369 aaKnown RBP17.41■□□□□ 0.38
HERC1-214ENST00000561400 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
HERC1-214ENST00000561400 REREQ9P2R6 1566 aa17.4■□□□□ 0.38
HERC1-214ENST00000561400 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
HERC1-214ENST00000561400 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms