RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 EFCAB5A4FU69 1503 aa16.96■□□□□ 0.3
PPP1R3E-204ENST00000559942 KIF27Q86VH2 1401 aa16.96■□□□□ 0.3
PPP1R3E-204ENST00000559942 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
PPP1R3E-204ENST00000559942 NCKAP5LQ9HCH0 1330 aa16.91■□□□□ 0.3
PPP1R3E-204ENST00000559942 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
PPP1R3E-204ENST00000559942 MAGI2Q86UL8 1455 aa16.9■□□□□ 0.3
PPP1R3E-204ENST00000559942 POTEAQ6S8J7 498 aa16.89■□□□□ 0.29
PPP1R3E-204ENST00000559942 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
PPP1R3E-204ENST00000559942 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
PPP1R3E-204ENST00000559942 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
PPP1R3E-204ENST00000559942 ATP10BO94823 1461 aa16.85■□□□□ 0.29
PPP1R3E-204ENST00000559942 ATP10AO60312 1499 aa16.84■□□□□ 0.29
PPP1R3E-204ENST00000559942 C3P01024 1663 aa16.83■□□□□ 0.28
PPP1R3E-204ENST00000559942 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
PPP1R3E-204ENST00000559942 PKD2Q13563 968 aa16.82■□□□□ 0.28
PPP1R3E-204ENST00000559942 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
PPP1R3E-204ENST00000559942 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
PPP1R3E-204ENST00000559942 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
PPP1R3E-204ENST00000559942 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
PPP1R3E-204ENST00000559942 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
PPP1R3E-204ENST00000559942 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
PPP1R3E-204ENST00000559942 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
PPP1R3E-204ENST00000559942 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
PPP1R3E-204ENST00000559942 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
PPP1R3E-204ENST00000559942 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.27
PPP1R3E-204ENST00000559942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
PPP1R3E-204ENST00000559942 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
PPP1R3E-204ENST00000559942 CPS1P31327 1500 aa16.74■□□□□ 0.27
PPP1R3E-204ENST00000559942 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
PPP1R3E-204ENST00000559942 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
PPP1R3E-204ENST00000559942 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
PPP1R3E-204ENST00000559942 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
PPP1R3E-204ENST00000559942 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
PPP1R3E-204ENST00000559942 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
PPP1R3E-204ENST00000559942 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
PPP1R3E-204ENST00000559942 SHANK2Q9UPX8 1470 aa16.66■□□□□ 0.26
PPP1R3E-204ENST00000559942 NPATQ14207 1427 aa16.63■□□□□ 0.25
PPP1R3E-204ENST00000559942 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
PPP1R3E-204ENST00000559942 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
PPP1R3E-204ENST00000559942 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
PPP1R3E-204ENST00000559942 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
PPP1R3E-204ENST00000559942 AGLP35573 1532 aa16.57■□□□□ 0.24
PPP1R3E-204ENST00000559942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.24
PPP1R3E-204ENST00000559942 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
PPP1R3E-204ENST00000559942 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
PPP1R3E-204ENST00000559942 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
PPP1R3E-204ENST00000559942 ZMYM3Q14202 1370 aa16.53■□□□□ 0.24
PPP1R3E-204ENST00000559942 TRIM52Q96A61 297 aa16.53■□□□□ 0.24
PPP1R3E-204ENST00000559942 REREQ9P2R6 1566 aa16.52■□□□□ 0.24
PPP1R3E-204ENST00000559942 MYO3AQ8NEV4 1616 aa16.52■□□□□ 0.23
PPP1R3E-204ENST00000559942 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
PPP1R3E-204ENST00000559942 DIP2CQ9Y2E4 1556 aa16.5■□□□□ 0.23
PPP1R3E-204ENST00000559942 AFAP1Q8N556 730 aa16.49■□□□□ 0.23
PPP1R3E-204ENST00000559942 MROH2AA6NES4 1674 aa16.49■□□□□ 0.23
PPP1R3E-204ENST00000559942 ZNF518AQ6AHZ1 1483 aa16.48■□□□□ 0.23
PPP1R3E-204ENST00000559942 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
PPP1R3E-204ENST00000559942 PLCH2O75038 1416 aa16.47■□□□□ 0.23
PPP1R3E-204ENST00000559942 RNF17Q9BXT8 1623 aaKnown RBP16.46■□□□□ 0.23
PPP1R3E-204ENST00000559942 POLR1AO95602 1720 aaPredicted RBP16.46■□□□□ 0.23
PPP1R3E-204ENST00000559942 IFFO2Q5TF58 517 aa16.46■□□□□ 0.23
PPP1R3E-204ENST00000559942 EFCAB2Q5VUJ9 269 aa16.46■□□□□ 0.23
PPP1R3E-204ENST00000559942 NEURL4Q96JN8 1562 aa16.44■□□□□ 0.22
PPP1R3E-204ENST00000559942 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
PPP1R3E-204ENST00000559942 LRRC7Q96NW7 1537 aa16.43■□□□□ 0.22
PPP1R3E-204ENST00000559942 KDM5CP41229 1560 aa16.43■□□□□ 0.22
PPP1R3E-204ENST00000559942 FOXD1Q16676 465 aa16.42■□□□□ 0.22
PPP1R3E-204ENST00000559942 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
PPP1R3E-204ENST00000559942 ABCA6Q8N139 1617 aa16.41■□□□□ 0.22
PPP1R3E-204ENST00000559942 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
PPP1R3E-204ENST00000559942 RBM33Q96EV2 1170 aaKnown RBP16.4■□□□□ 0.22
PPP1R3E-204ENST00000559942 ZNF772Q68DY9 489 aaPredicted RBP16.39■□□□□ 0.21
PPP1R3E-204ENST00000559942 ANKLE2Q86XL3 938 aa16.39■□□□□ 0.21
PPP1R3E-204ENST00000559942 A2ML1A8K2U0 1454 aa16.39■□□□□ 0.21
PPP1R3E-204ENST00000559942 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
PPP1R3E-204ENST00000559942 STRCP1A6NGW2 1772 aa16.37■□□□□ 0.21
PPP1R3E-204ENST00000559942 RXRBP28702 533 aa16.37■□□□□ 0.21
PPP1R3E-204ENST00000559942 MLH3Q9UHC1 1453 aa16.36■□□□□ 0.21
PPP1R3E-204ENST00000559942 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
PPP1R3E-204ENST00000559942 SYNMO15061 1565 aa16.34■□□□□ 0.21
PPP1R3E-204ENST00000559942 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
PPP1R3E-204ENST00000559942 NPHP4O75161 1426 aaPredicted RBP16.33■□□□□ 0.2
PPP1R3E-204ENST00000559942 MYO5CQ9NQX4 1742 aa16.31■□□□□ 0.2
PPP1R3E-204ENST00000559942 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
PPP1R3E-204ENST00000559942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPP1R3E-204ENST00000559942 MEX3CQ5U5Q3 659 aaKnown RBP16.29■□□□□ 0.2
PPP1R3E-204ENST00000559942 MED14O60244 1454 aa16.29■□□□□ 0.2
PPP1R3E-204ENST00000559942 JCADQ9P266 1359 aa16.27■□□□□ 0.2
PPP1R3E-204ENST00000559942 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
PPP1R3E-204ENST00000559942 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
PPP1R3E-204ENST00000559942 IQGAP1P46940 1657 aa16.24■□□□□ 0.19
PPP1R3E-204ENST00000559942 SAMD9Q5K651 1589 aa16.24■□□□□ 0.19
PPP1R3E-204ENST00000559942 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
PPP1R3E-204ENST00000559942 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
PPP1R3E-204ENST00000559942 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
PPP1R3E-204ENST00000559942 XIRP1Q702N8 1843 aaKnown RBP16.23■□□□□ 0.19
PPP1R3E-204ENST00000559942 ARHGAP5Q13017 1502 aa16.23■□□□□ 0.19
PPP1R3E-204ENST00000559942 NUTM2BA6NNL0 878 aaPredicted RBP16.22■□□□□ 0.19
PPP1R3E-204ENST00000559942 NUTM2EB1AL46 878 aaPredicted RBP16.22■□□□□ 0.19
PPP1R3E-204ENST00000559942 NUTM2DQ5VT03 806 aaPredicted RBP16.22■□□□□ 0.19
PPP1R3E-204ENST00000559942 NUTM2AQ8IVF1 878 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms