RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
TPM1-221ENST00000559831 CFDP1Q9UEE9 299 aaPredicted RBP15.93■□□□□ 0.14
TPM1-221ENST00000559831 MAP3K4Q9Y6R4 1608 aa15.92■□□□□ 0.14
TPM1-221ENST00000559831 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
TPM1-221ENST00000559831 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
TPM1-221ENST00000559831 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
TPM1-221ENST00000559831 PLCH2O75038 1416 aa15.9■□□□□ 0.14
TPM1-221ENST00000559831 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
TPM1-221ENST00000559831 CAMSAP2Q08AD1 1489 aa15.89■□□□□ 0.13
TPM1-221ENST00000559831 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
TPM1-221ENST00000559831 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
TPM1-221ENST00000559831 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
TPM1-221ENST00000559831 ZNF644Q9H582 1327 aaPredicted RBP15.87■□□□□ 0.13
TPM1-221ENST00000559831 CFAP74Q9C0B2 1584 aa15.87■□□□□ 0.13
TPM1-221ENST00000559831 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
TPM1-221ENST00000559831 FANCAO15360 1455 aa15.85■□□□□ 0.13
TPM1-221ENST00000559831 ITGAEP38570 1179 aa15.85■□□□□ 0.13
TPM1-221ENST00000559831 EFCAB2Q5VUJ9 269 aa15.85■□□□□ 0.13
TPM1-221ENST00000559831 PPRC1Q5VV67 1664 aaKnown RBP15.84■□□□□ 0.13
TPM1-221ENST00000559831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.83■□□□□ 0.12
TPM1-221ENST00000559831 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
TPM1-221ENST00000559831 ABCC1P33527 1531 aa15.82■□□□□ 0.12
TPM1-221ENST00000559831 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
TPM1-221ENST00000559831 DNMT1P26358 1616 aaKnown RBP15.82■□□□□ 0.12
TPM1-221ENST00000559831 CROCC2H7BZ55 1655 aa15.81■□□□□ 0.12
TPM1-221ENST00000559831 PLEKHH2Q8IVE3 1493 aa15.81■□□□□ 0.12
TPM1-221ENST00000559831 ADGRL1O94910 1474 aa15.79■□□□□ 0.12
TPM1-221ENST00000559831 AKNAQ7Z591 1439 aa15.79■□□□□ 0.12
TPM1-221ENST00000559831 HNRNPMP52272 730 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM1-221ENST00000559831 ARHGEF5Q12774 1597 aa15.79■□□□□ 0.12
TPM1-221ENST00000559831 TEX14Q8IWB6 1497 aa15.78■□□□□ 0.12
TPM1-221ENST00000559831 DAPK1P53355 1430 aa15.78■□□□□ 0.12
TPM1-221ENST00000559831 NEO1Q92859 1461 aa15.78■□□□□ 0.12
TPM1-221ENST00000559831 ARHGEF12Q9NZN5 1544 aa15.77■□□□□ 0.11
TPM1-221ENST00000559831 CCDC141Q6ZP82 1450 aa15.76■□□□□ 0.11
TPM1-221ENST00000559831 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
TPM1-221ENST00000559831 ABCC5O15440 1437 aa15.76■□□□□ 0.11
TPM1-221ENST00000559831 KIAA1107Q9UPP5 1409 aa15.76■□□□□ 0.11
TPM1-221ENST00000559831 MBD5Q9P267 1494 aa15.75■□□□□ 0.11
TPM1-221ENST00000559831 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
TPM1-221ENST00000559831 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
TPM1-221ENST00000559831 CHIC2Q9UKJ5 165 aa15.73■□□□□ 0.11
TPM1-221ENST00000559831 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
TPM1-221ENST00000559831 RSPH4AQ5TD94 716 aa15.71■□□□□ 0.11
TPM1-221ENST00000559831 SHANK2Q9UPX8 1470 aa15.71■□□□□ 0.1
TPM1-221ENST00000559831 C9orf84Q5VXU9 1444 aa15.7■□□□□ 0.1
TPM1-221ENST00000559831 TSPY4P0CV99 314 aa15.7■□□□□ 0.1
TPM1-221ENST00000559831 TSPY10P0CW01 314 aa15.7■□□□□ 0.1
TPM1-221ENST00000559831 RICTORQ6R327 1708 aa15.7■□□□□ 0.1
TPM1-221ENST00000559831 DENND4BO75064 1496 aaPredicted RBP15.69■□□□□ 0.1
TPM1-221ENST00000559831 MAST1Q9Y2H9 1570 aa15.69■□□□□ 0.1
TPM1-221ENST00000559831 POGZQ7Z3K3 1410 aa15.68■□□□□ 0.1
TPM1-221ENST00000559831 AFAP1Q8N556 730 aa15.68■□□□□ 0.1
TPM1-221ENST00000559831 GCC2Q8IWJ2 1684 aa15.67■□□□□ 0.1
TPM1-221ENST00000559831 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
TPM1-221ENST00000559831 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
TPM1-221ENST00000559831 RRP7BPQ9NSQ0 103 aa15.66■□□□□ 0.1
TPM1-221ENST00000559831 FRMPD1Q5SYB0 1578 aa15.66■□□□□ 0.1
TPM1-221ENST00000559831 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
TPM1-221ENST00000559831 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
TPM1-221ENST00000559831 ADGRL2O95490 1459 aa15.65■□□□□ 0.1
TPM1-221ENST00000559831 ZFYVE16Q7Z3T8 1539 aa15.65■□□□□ 0.1
TPM1-221ENST00000559831 RAPGEF3O95398 923 aa15.65■□□□□ 0.1
TPM1-221ENST00000559831 KDM5CP41229 1560 aa15.65■□□□□ 0.1
TPM1-221ENST00000559831 HECW2Q9P2P5 1572 aa15.65■□□□□ 0.1
TPM1-221ENST00000559831 ROCK1Q13464 1354 aa15.64■□□□□ 0.09
TPM1-221ENST00000559831 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
TPM1-221ENST00000559831 ATP7AQ04656 1500 aa15.64■□□□□ 0.09
TPM1-221ENST00000559831 PLXNC1O60486 1568 aa15.63■□□□□ 0.09
TPM1-221ENST00000559831 KIDINS220Q9ULH0 1771 aa15.63■□□□□ 0.09
TPM1-221ENST00000559831 HFM1A2PYH4 1435 aa15.61■□□□□ 0.09
TPM1-221ENST00000559831 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
TPM1-221ENST00000559831 SETD5Q9C0A6 1442 aa15.61■□□□□ 0.09
TPM1-221ENST00000559831 KDM6BO15054 1643 aa15.61■□□□□ 0.09
TPM1-221ENST00000559831 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
TPM1-221ENST00000559831 NAIPQ13075 1403 aa15.6■□□□□ 0.09
TPM1-221ENST00000559831 COL17A1Q9UMD9 1497 aaPredicted RBP15.6■□□□□ 0.09
TPM1-221ENST00000559831 KIF15Q9NS87 1388 aa15.6■□□□□ 0.09
TPM1-221ENST00000559831 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
TPM1-221ENST00000559831 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
TPM1-221ENST00000559831 ABCA6Q8N139 1617 aa15.58■□□□□ 0.09
TPM1-221ENST00000559831 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
TPM1-221ENST00000559831 DUOX2Q9NRD8 1548 aa15.56■□□□□ 0.08
TPM1-221ENST00000559831 DIP2CQ9Y2E4 1556 aa15.55■□□□□ 0.08
TPM1-221ENST00000559831 ANKRD50Q9ULJ7 1429 aa15.54■□□□□ 0.08
TPM1-221ENST00000559831 YEATS2Q9ULM3 1422 aa15.54■□□□□ 0.08
TPM1-221ENST00000559831 MAGI2Q86UL8 1455 aa15.52■□□□□ 0.08
TPM1-221ENST00000559831 ARHGEF40Q8TER5 1519 aa15.52■□□□□ 0.07
TPM1-221ENST00000559831 A2MP01023 1474 aa15.51■□□□□ 0.07
TPM1-221ENST00000559831 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
TPM1-221ENST00000559831 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
TPM1-221ENST00000559831 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
TPM1-221ENST00000559831 TRIM52Q96A61 297 aa15.48■□□□□ 0.07
TPM1-221ENST00000559831 ATP10AO60312 1499 aa15.47■□□□□ 0.07
TPM1-221ENST00000559831 UNC13BO14795 1591 aa15.46■□□□□ 0.07
TPM1-221ENST00000559831 HRCP23327 699 aa15.46■□□□□ 0.07
TPM1-221ENST00000559831 REREQ9P2R6 1566 aa15.45■□□□□ 0.06
TPM1-221ENST00000559831 BCORL1Q5H9F3 1711 aa15.44■□□□□ 0.06
TPM1-221ENST00000559831 SIGLEC1Q9BZZ2 1709 aa15.44■□□□□ 0.06
TPM1-221ENST00000559831 KIF3BO15066 747 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms