RNA–Protein interactions for RNA: ENST00000559554.5

CHRNA5-203, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA5, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-203ENST00000559554 ZNF335Q9H4Z2 1342 aaPredicted RBP26.2■■□□□ 1.79
CHRNA5-203ENST00000559554 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
CHRNA5-203ENST00000559554 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
CHRNA5-203ENST00000559554 HECW1Q76N89 1606 aa26.18■■□□□ 1.78
CHRNA5-203ENST00000559554 NCOA1Q15788 1441 aa26.18■■□□□ 1.78
CHRNA5-203ENST00000559554 MAGI2Q86UL8 1455 aa26.17■■□□□ 1.78
CHRNA5-203ENST00000559554 SCAF1Q9H7N4 1312 aaKnown RBP26.13■■□□□ 1.77
CHRNA5-203ENST00000559554 C3P01024 1663 aa26.12■■□□□ 1.77
CHRNA5-203ENST00000559554 CFAP74Q9C0B2 1584 aa26.11■■□□□ 1.77
CHRNA5-203ENST00000559554 PIP4K2BP78356 416 aa26.1■■□□□ 1.77
CHRNA5-203ENST00000559554 ATP10AO60312 1499 aa26.09■■□□□ 1.77
CHRNA5-203ENST00000559554 C9orf84Q5VXU9 1444 aa26.05■■□□□ 1.76
CHRNA5-203ENST00000559554 CAMSAP1Q5T5Y3 1602 aa26.04■■□□□ 1.76
CHRNA5-203ENST00000559554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.03■■□□□ 1.76
CHRNA5-203ENST00000559554 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
CHRNA5-203ENST00000559554 NCKAP5LQ9HCH0 1330 aa26.03■■□□□ 1.76
CHRNA5-203ENST00000559554 P3H3Q8IVL6 736 aa26■■□□□ 1.75
CHRNA5-203ENST00000559554 TRAPPC8Q9Y2L5 1435 aa25.98■■□□□ 1.75
CHRNA5-203ENST00000559554 RGS17Q9UGC6 210 aaPredicted RBP25.97■■□□□ 1.75
CHRNA5-203ENST00000559554 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
CHRNA5-203ENST00000559554 RAPGEF6Q8TEU7 1601 aa25.95■■□□□ 1.74
CHRNA5-203ENST00000559554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.94■■□□□ 1.74
CHRNA5-203ENST00000559554 SCAPERQ9BY12 1400 aa25.94■■□□□ 1.74
CHRNA5-203ENST00000559554 TOM1O60784 492 aa25.92■■□□□ 1.74
CHRNA5-203ENST00000559554 NUP153P49790 1475 aaKnown RBP25.84■■□□□ 1.73
CHRNA5-203ENST00000559554 PLEKHD1A6NEE1 506 aa25.83■■□□□ 1.73
CHRNA5-203ENST00000559554 SUPT6HQ7KZ85 1726 aaKnown RBP25.8■■□□□ 1.72
CHRNA5-203ENST00000559554 PKD2Q13563 968 aa25.8■■□□□ 1.72
CHRNA5-203ENST00000559554 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
CHRNA5-203ENST00000559554 ALKQ9UM73 1620 aa25.79■■□□□ 1.72
CHRNA5-203ENST00000559554 ESF1Q9H501 851 aaKnown RBP25.79■■□□□ 1.72
CHRNA5-203ENST00000559554 PPP6R1Q9UPN7 881 aa25.76■■□□□ 1.71
CHRNA5-203ENST00000559554 TCOF1Q13428 1488 aaKnown RBP25.76■■□□□ 1.71
CHRNA5-203ENST00000559554 DIP2CQ9Y2E4 1556 aa25.75■■□□□ 1.71
CHRNA5-203ENST00000559554 PLA2R1Q13018 1463 aa25.75■■□□□ 1.71
CHRNA5-203ENST00000559554 POTEAQ6S8J7 498 aa25.73■■□□□ 1.71
CHRNA5-203ENST00000559554 PLCH2O75038 1416 aa25.72■■□□□ 1.71
CHRNA5-203ENST00000559554 REREQ9P2R6 1566 aa25.72■■□□□ 1.71
CHRNA5-203ENST00000559554 SETD1AO15047 1707 aaKnown RBP25.71■■□□□ 1.71
CHRNA5-203ENST00000559554 AGLP35573 1532 aa25.71■■□□□ 1.71
CHRNA5-203ENST00000559554 NPATQ14207 1427 aa25.71■■□□□ 1.71
CHRNA5-203ENST00000559554 CPS1P31327 1500 aa25.7■■□□□ 1.7
CHRNA5-203ENST00000559554 ZNF142P52746 1687 aaPredicted RBP25.69■■□□□ 1.7
CHRNA5-203ENST00000559554 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
CHRNA5-203ENST00000559554 SAMD9Q5K651 1589 aa25.68■■□□□ 1.7
CHRNA5-203ENST00000559554 ABCA6Q8N139 1617 aa25.66■■□□□ 1.7
CHRNA5-203ENST00000559554 KDM5CP41229 1560 aa25.66■■□□□ 1.7
CHRNA5-203ENST00000559554 PTPRKQ15262 1439 aa25.66■■□□□ 1.7
CHRNA5-203ENST00000559554 CNTLNQ9NXG0 1405 aa25.66■■□□□ 1.7
CHRNA5-203ENST00000559554 MYT1LQ9UL68 1186 aa25.66■■□□□ 1.7
CHRNA5-203ENST00000559554 MYO3AQ8NEV4 1616 aa25.65■■□□□ 1.7
CHRNA5-203ENST00000559554 ZNF518AQ6AHZ1 1483 aa25.65■■□□□ 1.7
CHRNA5-203ENST00000559554 SHANK2Q9UPX8 1470 aa25.64■■□□□ 1.69
CHRNA5-203ENST00000559554 MROH2AA6NES4 1674 aa25.64■■□□□ 1.69
CHRNA5-203ENST00000559554 CEP170BQ9Y4F5 1589 aaPredicted RBP25.61■■□□□ 1.69
CHRNA5-203ENST00000559554 SRCAPQ6ZRS2 3230 aa25.6■■□□□ 1.69
CHRNA5-203ENST00000559554 EFCAB2Q5VUJ9 269 aa25.6■■□□□ 1.69
CHRNA5-203ENST00000559554 ZMYM3Q14202 1370 aa25.59■■□□□ 1.69
CHRNA5-203ENST00000559554 MYO5CQ9NQX4 1742 aa25.58■■□□□ 1.69
CHRNA5-203ENST00000559554 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
CHRNA5-203ENST00000559554 POLR1AO95602 1720 aaPredicted RBP25.52■■□□□ 1.68
CHRNA5-203ENST00000559554 MLH3Q9UHC1 1453 aa25.51■■□□□ 1.67
CHRNA5-203ENST00000559554 NEURL4Q96JN8 1562 aa25.5■■□□□ 1.67
CHRNA5-203ENST00000559554 VWDEQ8N2E2 1590 aa25.49■■□□□ 1.67
CHRNA5-203ENST00000559554 UPF1Q92900 1129 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHRNA5-203ENST00000559554 CLTCQ00610 1675 aaKnown RBP25.47■■□□□ 1.67
CHRNA5-203ENST00000559554 DNMT1P26358 1616 aaKnown RBP25.46■■□□□ 1.67
CHRNA5-203ENST00000559554 CDK13Q14004 1512 aaKnown RBP25.46■■□□□ 1.67
CHRNA5-203ENST00000559554 KIDINS220Q9ULH0 1771 aa25.43■■□□□ 1.66
CHRNA5-203ENST00000559554 STRCP1A6NGW2 1772 aa25.41■■□□□ 1.66
CHRNA5-203ENST00000559554 ARHGAP5Q13017 1502 aa25.4■■□□□ 1.66
CHRNA5-203ENST00000559554 A2ML1A8K2U0 1454 aa25.39■■□□□ 1.65
CHRNA5-203ENST00000559554 RNF17Q9BXT8 1623 aaKnown RBP25.38■■□□□ 1.65
CHRNA5-203ENST00000559554 RANGAP1P46060 587 aaPredicted RBP25.37■■□□□ 1.65
CHRNA5-203ENST00000559554 LRRC7Q96NW7 1537 aa25.36■■□□□ 1.65
CHRNA5-203ENST00000559554 KIF14Q15058 1648 aa25.35■■□□□ 1.65
CHRNA5-203ENST00000559554 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
CHRNA5-203ENST00000559554 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
CHRNA5-203ENST00000559554 ANKLE2Q86XL3 938 aa25.25■■□□□ 1.63
CHRNA5-203ENST00000559554 ABCC1P33527 1531 aa25.24■■□□□ 1.63
CHRNA5-203ENST00000559554 SYNMO15061 1565 aa25.23■■□□□ 1.63
CHRNA5-203ENST00000559554 NPHP4O75161 1426 aaPredicted RBP25.23■■□□□ 1.63
CHRNA5-203ENST00000559554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.21■■□□□ 1.63
CHRNA5-203ENST00000559554 MED14O60244 1454 aa25.21■■□□□ 1.63
CHRNA5-203ENST00000559554 XIRP1Q702N8 1843 aaKnown RBP25.2■■□□□ 1.62
CHRNA5-203ENST00000559554 IQGAP1P46940 1657 aa25.19■■□□□ 1.62
CHRNA5-203ENST00000559554 GGT6Q6P531 493 aa25.18■■□□□ 1.62
CHRNA5-203ENST00000559554 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
CHRNA5-203ENST00000559554 DEPDC5O75140 1603 aa25.18■■□□□ 1.62
CHRNA5-203ENST00000559554 FAM135BQ49AJ0 1406 aa25.14■■□□□ 1.62
CHRNA5-203ENST00000559554 SAMD9LQ8IVG5 1584 aa25.14■■□□□ 1.61
CHRNA5-203ENST00000559554 PLXNC1O60486 1568 aa25.11■■□□□ 1.61
CHRNA5-203ENST00000559554 FBXO31Q5XUX0 539 aaPredicted RBP25.11■■□□□ 1.61
CHRNA5-203ENST00000559554 PREX2Q70Z35 1606 aa25.11■■□□□ 1.61
CHRNA5-203ENST00000559554 TNRQ92752 1358 aa25.1■■□□□ 1.61
CHRNA5-203ENST00000559554 ATP1B4Q9UN42 357 aaPredicted RBP25.1■■□□□ 1.61
CHRNA5-203ENST00000559554 TROQ12816 1431 aaPredicted RBP25.1■■□□□ 1.61
CHRNA5-203ENST00000559554 CDK11AQ9UQ88 783 aaPredicted RBP25.09■■□□□ 1.61
CHRNA5-203ENST00000559554 THEMISQ8N1K5 641 aaPredicted RBP25.08■■□□□ 1.61
CHRNA5-203ENST00000559554 ROBO1Q9Y6N7 1651 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms