RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 TEX14Q8IWB6 1497 aa19.3■□□□□ 0.68
GABPB1-208ENST00000558970 FANCAO15360 1455 aa19.29■□□□□ 0.68
GABPB1-208ENST00000558970 GPATCH8Q9UKJ3 1502 aaKnown RBP19.29■□□□□ 0.68
GABPB1-208ENST00000558970 PLCH2O75038 1416 aa19.28■□□□□ 0.68
GABPB1-208ENST00000558970 KDM6BO15054 1643 aa19.28■□□□□ 0.68
GABPB1-208ENST00000558970 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.68
GABPB1-208ENST00000558970 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
GABPB1-208ENST00000558970 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
GABPB1-208ENST00000558970 ARAP3Q8WWN8 1544 aa19.25■□□□□ 0.67
GABPB1-208ENST00000558970 CFDP1Q9UEE9 299 aaPredicted RBP19.23■□□□□ 0.67
GABPB1-208ENST00000558970 MYOM3Q5VTT5 1437 aa19.23■□□□□ 0.67
GABPB1-208ENST00000558970 NEO1Q92859 1461 aa19.22■□□□□ 0.67
GABPB1-208ENST00000558970 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
GABPB1-208ENST00000558970 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
GABPB1-208ENST00000558970 ADGRL1O94910 1474 aa19.21■□□□□ 0.67
GABPB1-208ENST00000558970 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
GABPB1-208ENST00000558970 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
GABPB1-208ENST00000558970 CAMSAP2Q08AD1 1489 aa19.19■□□□□ 0.66
GABPB1-208ENST00000558970 ABCC1P33527 1531 aa19.19■□□□□ 0.66
GABPB1-208ENST00000558970 ZNF644Q9H582 1327 aaPredicted RBP19.19■□□□□ 0.66
GABPB1-208ENST00000558970 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
GABPB1-208ENST00000558970 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
GABPB1-208ENST00000558970 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
GABPB1-208ENST00000558970 SCAPERQ9BY12 1400 aa19.15■□□□□ 0.66
GABPB1-208ENST00000558970 FRMPD1Q5SYB0 1578 aa19.15■□□□□ 0.66
GABPB1-208ENST00000558970 ARHGEF12Q9NZN5 1544 aa19.14■□□□□ 0.65
GABPB1-208ENST00000558970 DENND4BO75064 1496 aaPredicted RBP19.12■□□□□ 0.65
GABPB1-208ENST00000558970 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
GABPB1-208ENST00000558970 RAPGEF3O95398 923 aa19.12■□□□□ 0.65
GABPB1-208ENST00000558970 HNRNPMP52272 730 aaKnown RBP eCLIP19.12■□□□□ 0.65
GABPB1-208ENST00000558970 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
GABPB1-208ENST00000558970 TRAPPC8Q9Y2L5 1435 aa19.09■□□□□ 0.65
GABPB1-208ENST00000558970 PLEKHH2Q8IVE3 1493 aa19.09■□□□□ 0.65
GABPB1-208ENST00000558970 POGZQ7Z3K3 1410 aa19.08■□□□□ 0.65
GABPB1-208ENST00000558970 CROCC2H7BZ55 1655 aa19.08■□□□□ 0.65
GABPB1-208ENST00000558970 TCOF1Q13428 1488 aaKnown RBP19.06■□□□□ 0.64
GABPB1-208ENST00000558970 ZNF518AQ6AHZ1 1483 aa19.06■□□□□ 0.64
GABPB1-208ENST00000558970 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
GABPB1-208ENST00000558970 DNMT1P26358 1616 aaKnown RBP19.05■□□□□ 0.64
GABPB1-208ENST00000558970 AFAP1Q8N556 730 aa19.05■□□□□ 0.64
GABPB1-208ENST00000558970 HECW2Q9P2P5 1572 aa19.05■□□□□ 0.64
GABPB1-208ENST00000558970 KDM5CP41229 1560 aa19.04■□□□□ 0.64
GABPB1-208ENST00000558970 ARHGEF5Q12774 1597 aa19.04■□□□□ 0.64
GABPB1-208ENST00000558970 KIAA1107Q9UPP5 1409 aa19.04■□□□□ 0.64
GABPB1-208ENST00000558970 CCDC141Q6ZP82 1450 aa19.03■□□□□ 0.64
GABPB1-208ENST00000558970 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
GABPB1-208ENST00000558970 ITGAEP38570 1179 aa19.03■□□□□ 0.64
GABPB1-208ENST00000558970 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
GABPB1-208ENST00000558970 KIDINS220Q9ULH0 1771 aa19.01■□□□□ 0.63
GABPB1-208ENST00000558970 ZMYM4Q5VZL5 1548 aa19.01■□□□□ 0.63
GABPB1-208ENST00000558970 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
GABPB1-208ENST00000558970 INO80Q9ULG1 1556 aaPredicted RBP19■□□□□ 0.63
GABPB1-208ENST00000558970 ABCA6Q8N139 1617 aa19■□□□□ 0.63
GABPB1-208ENST00000558970 ATP7AQ04656 1500 aa19■□□□□ 0.63
GABPB1-208ENST00000558970 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
GABPB1-208ENST00000558970 DAPK1P53355 1430 aa18.99■□□□□ 0.63
GABPB1-208ENST00000558970 ADGBQ8N7X0 1667 aa18.98■□□□□ 0.63
GABPB1-208ENST00000558970 ARHGEF40Q8TER5 1519 aa18.98■□□□□ 0.63
GABPB1-208ENST00000558970 YEATS2Q9ULM3 1422 aa18.97■□□□□ 0.63
GABPB1-208ENST00000558970 SPAG9O60271 1321 aaKnown RBP18.97■□□□□ 0.63
GABPB1-208ENST00000558970 CHIC2Q9UKJ5 165 aa18.96■□□□□ 0.63
GABPB1-208ENST00000558970 ABCC5O15440 1437 aa18.96■□□□□ 0.63
GABPB1-208ENST00000558970 DIP2CQ9Y2E4 1556 aa18.95■□□□□ 0.62
GABPB1-208ENST00000558970 C9orf84Q5VXU9 1444 aa18.94■□□□□ 0.62
GABPB1-208ENST00000558970 MAST1Q9Y2H9 1570 aa18.93■□□□□ 0.62
GABPB1-208ENST00000558970 TSPY4P0CV99 314 aa18.93■□□□□ 0.62
GABPB1-208ENST00000558970 TSPY10P0CW01 314 aa18.93■□□□□ 0.62
GABPB1-208ENST00000558970 SIGLEC1Q9BZZ2 1709 aa18.93■□□□□ 0.62
GABPB1-208ENST00000558970 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
GABPB1-208ENST00000558970 SHANK2Q9UPX8 1470 aa18.91■□□□□ 0.62
GABPB1-208ENST00000558970 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
GABPB1-208ENST00000558970 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
GABPB1-208ENST00000558970 MAGI2Q86UL8 1455 aa18.9■□□□□ 0.62
GABPB1-208ENST00000558970 PLXNC1O60486 1568 aa18.89■□□□□ 0.61
GABPB1-208ENST00000558970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.613e-6■■□□□ 12.8
GABPB1-208ENST00000558970 RTEL1-TNFRSF6BF6WH68 1400 aa18.86■□□□□ 0.61
GABPB1-208ENST00000558970 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
GABPB1-208ENST00000558970 ATP10AO60312 1499 aa18.84■□□□□ 0.61
GABPB1-208ENST00000558970 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
GABPB1-208ENST00000558970 ARID4BQ4LE39 1312 aaPredicted RBP18.82■□□□□ 0.6
GABPB1-208ENST00000558970 ADGRL2O95490 1459 aa18.82■□□□□ 0.6
GABPB1-208ENST00000558970 A2MP01023 1474 aa18.82■□□□□ 0.6
GABPB1-208ENST00000558970 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
GABPB1-208ENST00000558970 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
GABPB1-208ENST00000558970 NCOA1Q15788 1441 aa18.79■□□□□ 0.6
GABPB1-208ENST00000558970 REREQ9P2R6 1566 aa18.79■□□□□ 0.6
GABPB1-208ENST00000558970 DUOX2Q9NRD8 1548 aa18.79■□□□□ 0.6
GABPB1-208ENST00000558970 MLECQ14165 292 aa18.78■□□□□ 0.6
GABPB1-208ENST00000558970 BCORL1Q5H9F3 1711 aa18.76■□□□□ 0.59
GABPB1-208ENST00000558970 EIF2AK4Q9P2K8 1649 aaKnown RBP18.75■□□□□ 0.59
GABPB1-208ENST00000558970 DHX29Q7Z478 1369 aaKnown RBP18.75■□□□□ 0.59
GABPB1-208ENST00000558970 FER1L4A9Z1Z3 1794 aa18.74■□□□□ 0.59
GABPB1-208ENST00000558970 ROCK1Q13464 1354 aa18.74■□□□□ 0.59
GABPB1-208ENST00000558970 KIF3BO15066 747 aa18.72■□□□□ 0.59
GABPB1-208ENST00000558970 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
GABPB1-208ENST00000558970 AGLP35573 1532 aa18.71■□□□□ 0.59
GABPB1-208ENST00000558970 ERBINQ96RT1 1412 aa18.71■□□□□ 0.59
GABPB1-208ENST00000558970 ANKRD50Q9ULJ7 1429 aa18.71■□□□□ 0.59
GABPB1-208ENST00000558970 MADDQ8WXG6 1647 aa18.71■□□□□ 0.58
GABPB1-208ENST00000558970 CEP152O94986 1710 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms