RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
CLPX-203ENST00000558958 ARAP3Q8WWN8 1544 aa27.57■■■□□ 2
CLPX-203ENST00000558958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.57■■■□□ 21e-6■■□□□ 12.1
CLPX-203ENST00000558958 CD109Q6YHK3 1445 aa27.56■■■□□ 2
CLPX-203ENST00000558958 ARHGAP5Q13017 1502 aa27.55■■■□□ 2
CLPX-203ENST00000558958 FAM50AQ14320 339 aaKnown RBP27.55■■■□□ 2
CLPX-203ENST00000558958 ZNF644Q9H582 1327 aaPredicted RBP27.53■■■□□ 2
CLPX-203ENST00000558958 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
CLPX-203ENST00000558958 MAP3K4Q9Y6R4 1608 aa27.52■■■□□ 2
CLPX-203ENST00000558958 EFCAB2Q5VUJ9 269 aa27.51■■■□□ 2
CLPX-203ENST00000558958 CAMSAP2Q08AD1 1489 aa27.5■■□□□ 1.99
CLPX-203ENST00000558958 KIF13AQ9H1H9 1805 aa27.48■■□□□ 1.99
CLPX-203ENST00000558958 PCGF6Q9BYE7 350 aa27.48■■□□□ 1.99
CLPX-203ENST00000558958 FANCAO15360 1455 aa27.47■■□□□ 1.99
CLPX-203ENST00000558958 SAMD9LQ8IVG5 1584 aa27.47■■□□□ 1.99
CLPX-203ENST00000558958 PLEKHH2Q8IVE3 1493 aa27.42■■□□□ 1.98
CLPX-203ENST00000558958 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
CLPX-203ENST00000558958 ITGAEP38570 1179 aa27.38■■□□□ 1.97
CLPX-203ENST00000558958 CFAP74Q9C0B2 1584 aa27.38■■□□□ 1.97
CLPX-203ENST00000558958 AKNAQ7Z591 1439 aa27.38■■□□□ 1.97
CLPX-203ENST00000558958 NEO1Q92859 1461 aa27.38■■□□□ 1.97
CLPX-203ENST00000558958 MBD5Q9P267 1494 aa27.38■■□□□ 1.97
CLPX-203ENST00000558958 HNRNPMP52272 730 aaKnown RBP eCLIP27.38■■□□□ 1.97
CLPX-203ENST00000558958 ABCC1P33527 1531 aa27.37■■□□□ 1.97
CLPX-203ENST00000558958 SYCP2Q9BX26 1530 aa27.36■■□□□ 1.97
CLPX-203ENST00000558958 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
CLPX-203ENST00000558958 PPRC1Q5VV67 1664 aaKnown RBP27.36■■□□□ 1.97
CLPX-203ENST00000558958 ABCC5O15440 1437 aa27.36■■□□□ 1.97
CLPX-203ENST00000558958 DAPK1P53355 1430 aa27.35■■□□□ 1.97
CLPX-203ENST00000558958 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
CLPX-203ENST00000558958 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
CLPX-203ENST00000558958 ARHGEF5Q12774 1597 aa27.34■■□□□ 1.97
CLPX-203ENST00000558958 ADGRL1O94910 1474 aa27.33■■□□□ 1.97
CLPX-203ENST00000558958 TSPOAP1O95153 1857 aa27.33■■□□□ 1.97
CLPX-203ENST00000558958 PTPRKQ15262 1439 aa27.33■■□□□ 1.97
CLPX-203ENST00000558958 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
CLPX-203ENST00000558958 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.97
CLPX-203ENST00000558958 SCAPERQ9BY12 1400 aa27.3■■□□□ 1.96
CLPX-203ENST00000558958 CCDC141Q6ZP82 1450 aa27.3■■□□□ 1.96
CLPX-203ENST00000558958 TRAPPC8Q9Y2L5 1435 aa27.27■■□□□ 1.96
CLPX-203ENST00000558958 CROCC2H7BZ55 1655 aa27.25■■□□□ 1.95
CLPX-203ENST00000558958 SHANK2Q9UPX8 1470 aa27.24■■□□□ 1.95
CLPX-203ENST00000558958 TSPY4P0CV99 314 aa27.24■■□□□ 1.95
CLPX-203ENST00000558958 TSPY10P0CW01 314 aa27.24■■□□□ 1.95
CLPX-203ENST00000558958 CHIC2Q9UKJ5 165 aa27.23■■□□□ 1.95
CLPX-203ENST00000558958 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
CLPX-203ENST00000558958 C9orf84Q5VXU9 1444 aa27.21■■□□□ 1.95
CLPX-203ENST00000558958 POGZQ7Z3K3 1410 aa27.2■■□□□ 1.94
CLPX-203ENST00000558958 DENND4BO75064 1496 aaPredicted RBP27.2■■□□□ 1.94
CLPX-203ENST00000558958 ROCK1Q13464 1354 aa27.2■■□□□ 1.94
CLPX-203ENST00000558958 ZNF518AQ6AHZ1 1483 aa27.19■■□□□ 1.94
CLPX-203ENST00000558958 ADGRL2O95490 1459 aa27.18■■□□□ 1.94
CLPX-203ENST00000558958 MAST1Q9Y2H9 1570 aa27.17■■□□□ 1.94
CLPX-203ENST00000558958 NCOA1Q15788 1441 aa27.15■■□□□ 1.94
CLPX-203ENST00000558958 SPAG9O60271 1321 aaKnown RBP27.14■■□□□ 1.94
CLPX-203ENST00000558958 HFM1A2PYH4 1435 aa27.14■■□□□ 1.94
CLPX-203ENST00000558958 RAPGEF3O95398 923 aa27.13■■□□□ 1.93
CLPX-203ENST00000558958 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
CLPX-203ENST00000558958 KDM5CP41229 1560 aa27.13■■□□□ 1.93
CLPX-203ENST00000558958 ADGBQ8N7X0 1667 aa27.13■■□□□ 1.93
CLPX-203ENST00000558958 RRP7BPQ9NSQ0 103 aa27.13■■□□□ 1.93
CLPX-203ENST00000558958 RTEL1-TNFRSF6BF6WH68 1400 aa27.12■■□□□ 1.93
CLPX-203ENST00000558958 RICTORQ6R327 1708 aa27.11■■□□□ 1.93
CLPX-203ENST00000558958 NAIPQ13075 1403 aa27.1■■□□□ 1.93
CLPX-203ENST00000558958 COL17A1Q9UMD9 1497 aaPredicted RBP27.09■■□□□ 1.93
CLPX-203ENST00000558958 SETD5Q9C0A6 1442 aa27.09■■□□□ 1.93
CLPX-203ENST00000558958 ZFYVE16Q7Z3T8 1539 aa27.09■■□□□ 1.93
CLPX-203ENST00000558958 FRMPD1Q5SYB0 1578 aa27.08■■□□□ 1.93
CLPX-203ENST00000558958 INO80Q9ULG1 1556 aaPredicted RBP27.07■■□□□ 1.92
CLPX-203ENST00000558958 MLH3Q9UHC1 1453 aa27.07■■□□□ 1.92
CLPX-203ENST00000558958 ATP7AQ04656 1500 aa27.07■■□□□ 1.92
CLPX-203ENST00000558958 PLXNC1O60486 1568 aa27.06■■□□□ 1.92
CLPX-203ENST00000558958 KIF15Q9NS87 1388 aa27.04■■□□□ 1.92
CLPX-203ENST00000558958 GCC2Q8IWJ2 1684 aa27.04■■□□□ 1.92
CLPX-203ENST00000558958 HECW2Q9P2P5 1572 aa27.03■■□□□ 1.92
CLPX-203ENST00000558958 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
CLPX-203ENST00000558958 ZMYM4Q5VZL5 1548 aa27.02■■□□□ 1.92
CLPX-203ENST00000558958 RAB3GAP2Q9H2M9 1393 aa27.02■■□□□ 1.92
CLPX-203ENST00000558958 MYT1LQ9UL68 1186 aa27.01■■□□□ 1.91
CLPX-203ENST00000558958 HRCP23327 699 aa26.98■■□□□ 1.91
CLPX-203ENST00000558958 ANKRD50Q9ULJ7 1429 aa26.97■■□□□ 1.91
CLPX-203ENST00000558958 MAGI2Q86UL8 1455 aa26.97■■□□□ 1.91
CLPX-203ENST00000558958 DUOX2Q9NRD8 1548 aa26.96■■□□□ 1.91
CLPX-203ENST00000558958 KDM6BO15054 1643 aa26.95■■□□□ 1.9
CLPX-203ENST00000558958 YEATS2Q9ULM3 1422 aa26.92■■□□□ 1.9
CLPX-203ENST00000558958 ABCA6Q8N139 1617 aa26.92■■□□□ 1.9
CLPX-203ENST00000558958 DHX29Q7Z478 1369 aaKnown RBP26.9■■□□□ 1.9
CLPX-203ENST00000558958 ERBINQ96RT1 1412 aa26.9■■□□□ 1.9
CLPX-203ENST00000558958 DIP2CQ9Y2E4 1556 aa26.9■■□□□ 1.9
CLPX-203ENST00000558958 A2MP01023 1474 aa26.88■■□□□ 1.89
CLPX-203ENST00000558958 ACIN1Q9UKV3 1341 aaKnown RBP26.85■■□□□ 1.89
CLPX-203ENST00000558958 ATP10AO60312 1499 aa26.83■■□□□ 1.89
CLPX-203ENST00000558958 ARHGEF40Q8TER5 1519 aa26.83■■□□□ 1.89
CLPX-203ENST00000558958 EIF2AK4Q9P2K8 1649 aaKnown RBP26.79■■□□□ 1.88
CLPX-203ENST00000558958 REREQ9P2R6 1566 aa26.78■■□□□ 1.88
CLPX-203ENST00000558958 TRIM52Q96A61 297 aa26.78■■□□□ 1.88
CLPX-203ENST00000558958 KIF3BO15066 747 aa26.76■■□□□ 1.87
CLPX-203ENST00000558958 DHX57Q6P158 1386 aaKnown RBP26.74■■□□□ 1.87
CLPX-203ENST00000558958 UNC13BO14795 1591 aa26.74■■□□□ 1.87
CLPX-203ENST00000558958 BCORL1Q5H9F3 1711 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms