RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 UBAP1LF5GYI3 381 aa21.57■■□□□ 1.04
CNOT10-219ENST00000556853 CFAP74Q9C0B2 1584 aa21.56■■□□□ 1.04
CNOT10-219ENST00000556853 HECW1Q76N89 1606 aa21.55■■□□□ 1.04
CNOT10-219ENST00000556853 FAM9AQ8IZU1 332 aaPredicted RBP21.55■■□□□ 1.04
CNOT10-219ENST00000556853 ATP10AO60312 1499 aa21.51■■□□□ 1.03
CNOT10-219ENST00000556853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
CNOT10-219ENST00000556853 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
CNOT10-219ENST00000556853 NCOA1Q15788 1441 aa21.49■■□□□ 1.03
CNOT10-219ENST00000556853 C9orf84Q5VXU9 1444 aa21.49■■□□□ 1.03
CNOT10-219ENST00000556853 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
CNOT10-219ENST00000556853 RAPGEF6Q8TEU7 1601 aa21.47■■□□□ 1.03
CNOT10-219ENST00000556853 ZNF335Q9H4Z2 1342 aaPredicted RBP21.44■■□□□ 1.02
CNOT10-219ENST00000556853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.44■■□□□ 1.02
CNOT10-219ENST00000556853 HSPA1LP34931 641 aa21.43■■□□□ 1.02
CNOT10-219ENST00000556853 C3P01024 1663 aa21.41■■□□□ 1.02
CNOT10-219ENST00000556853 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
CNOT10-219ENST00000556853 NUP153P49790 1475 aaKnown RBP21.39■■□□□ 1.02
CNOT10-219ENST00000556853 TRAPPC8Q9Y2L5 1435 aa21.38■■□□□ 1.01
CNOT10-219ENST00000556853 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
CNOT10-219ENST00000556853 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
CNOT10-219ENST00000556853 CAMSAP1Q5T5Y3 1602 aa21.36■■□□□ 1.01
CNOT10-219ENST00000556853 SAMD9Q5K651 1589 aa21.31■■□□□ 1
CNOT10-219ENST00000556853 NCKAP5LQ9HCH0 1330 aa21.31■■□□□ 1
CNOT10-219ENST00000556853 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
CNOT10-219ENST00000556853 PRXQ9BXM0 1461 aa21.29■■□□□ 1
CNOT10-219ENST00000556853 PIP4K2BP78356 416 aa21.29■■□□□ 1
CNOT10-219ENST00000556853 PLCH2O75038 1416 aa21.29■■□□□ 1
CNOT10-219ENST00000556853 REREQ9P2R6 1566 aa21.25■□□□□ 0.99
CNOT10-219ENST00000556853 TOM1O60784 492 aa21.24■□□□□ 0.99
CNOT10-219ENST00000556853 ESF1Q9H501 851 aaKnown RBP21.23■□□□□ 0.99
CNOT10-219ENST00000556853 AGLP35573 1532 aa21.23■□□□□ 0.99
CNOT10-219ENST00000556853 DIP2CQ9Y2E4 1556 aa21.23■□□□□ 0.99
CNOT10-219ENST00000556853 PKD2Q13563 968 aa21.22■□□□□ 0.99
CNOT10-219ENST00000556853 ZNF518AQ6AHZ1 1483 aa21.21■□□□□ 0.99
CNOT10-219ENST00000556853 KDM5CP41229 1560 aa21.21■□□□□ 0.99
CNOT10-219ENST00000556853 NPATQ14207 1427 aa21.21■□□□□ 0.99
CNOT10-219ENST00000556853 PLA2R1Q13018 1463 aa21.2■□□□□ 0.98
CNOT10-219ENST00000556853 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
CNOT10-219ENST00000556853 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
CNOT10-219ENST00000556853 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
CNOT10-219ENST00000556853 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
CNOT10-219ENST00000556853 RGS17Q9UGC6 210 aaPredicted RBP21.16■□□□□ 0.98
CNOT10-219ENST00000556853 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
CNOT10-219ENST00000556853 ABCA6Q8N139 1617 aa21.15■□□□□ 0.98
CNOT10-219ENST00000556853 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
CNOT10-219ENST00000556853 ZNF142P52746 1687 aaPredicted RBP21.12■□□□□ 0.97
CNOT10-219ENST00000556853 CPS1P31327 1500 aa21.12■□□□□ 0.97
CNOT10-219ENST00000556853 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
CNOT10-219ENST00000556853 MROH2AA6NES4 1674 aa21.11■□□□□ 0.97
CNOT10-219ENST00000556853 SUPT6HQ7KZ85 1726 aaKnown RBP21.1■□□□□ 0.97
CNOT10-219ENST00000556853 MLH3Q9UHC1 1453 aa21.1■□□□□ 0.97
CNOT10-219ENST00000556853 ALKQ9UM73 1620 aa21.09■□□□□ 0.97
CNOT10-219ENST00000556853 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
CNOT10-219ENST00000556853 MYO3AQ8NEV4 1616 aa21.07■□□□□ 0.96
CNOT10-219ENST00000556853 CEP170BQ9Y4F5 1589 aaPredicted RBP21.07■□□□□ 0.96
CNOT10-219ENST00000556853 PTPRKQ15262 1439 aa21.07■□□□□ 0.96
CNOT10-219ENST00000556853 CDK13Q14004 1512 aaKnown RBP21.05■□□□□ 0.96
CNOT10-219ENST00000556853 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
CNOT10-219ENST00000556853 ARHGAP5Q13017 1502 aa21■□□□□ 0.95
CNOT10-219ENST00000556853 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
CNOT10-219ENST00000556853 POTEAQ6S8J7 498 aa20.97■□□□□ 0.95
CNOT10-219ENST00000556853 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
CNOT10-219ENST00000556853 KIDINS220Q9ULH0 1771 aa20.96■□□□□ 0.95
CNOT10-219ENST00000556853 KIF14Q15058 1648 aa20.95■□□□□ 0.94
CNOT10-219ENST00000556853 NEURL4Q96JN8 1562 aa20.94■□□□□ 0.94
CNOT10-219ENST00000556853 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
CNOT10-219ENST00000556853 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
CNOT10-219ENST00000556853 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
CNOT10-219ENST00000556853 POLR1AO95602 1720 aaPredicted RBP20.92■□□□□ 0.94
CNOT10-219ENST00000556853 A2ML1A8K2U0 1454 aa20.92■□□□□ 0.94
CNOT10-219ENST00000556853 CDC42BPBQ9Y5S2 1711 aa20.89■□□□□ 0.93
CNOT10-219ENST00000556853 ABCC1P33527 1531 aa20.88■□□□□ 0.93
CNOT10-219ENST00000556853 ITSN2Q9NZM3 1697 aa20.88■□□□□ 0.93
CNOT10-219ENST00000556853 SETD1AO15047 1707 aaKnown RBP20.86■□□□□ 0.93
CNOT10-219ENST00000556853 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
CNOT10-219ENST00000556853 TROQ12816 1431 aaPredicted RBP20.83■□□□□ 0.93
CNOT10-219ENST00000556853 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
CNOT10-219ENST00000556853 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
CNOT10-219ENST00000556853 LRRC7Q96NW7 1537 aa20.81■□□□□ 0.92
CNOT10-219ENST00000556853 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
CNOT10-219ENST00000556853 STRCP1A6NGW2 1772 aa20.78■□□□□ 0.92
CNOT10-219ENST00000556853 SAMD9LQ8IVG5 1584 aa20.78■□□□□ 0.92
CNOT10-219ENST00000556853 ANKLE2Q86XL3 938 aa20.78■□□□□ 0.92
CNOT10-219ENST00000556853 CLIP1P30622 1438 aa20.78■□□□□ 0.92
CNOT10-219ENST00000556853 MED14O60244 1454 aa20.77■□□□□ 0.92
CNOT10-219ENST00000556853 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
CNOT10-219ENST00000556853 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
CNOT10-219ENST00000556853 UPF1Q92900 1129 aaKnown RBP eCLIP20.76■□□□□ 0.91
CNOT10-219ENST00000556853 NPHP4O75161 1426 aaPredicted RBP20.76■□□□□ 0.91
CNOT10-219ENST00000556853 GGT6Q6P531 493 aa20.75■□□□□ 0.91
CNOT10-219ENST00000556853 SYNMO15061 1565 aa20.75■□□□□ 0.91
CNOT10-219ENST00000556853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.74■□□□□ 0.91
CNOT10-219ENST00000556853 DEPDC5O75140 1603 aa20.74■□□□□ 0.91
CNOT10-219ENST00000556853 A2MP01023 1474 aa20.71■□□□□ 0.91
CNOT10-219ENST00000556853 SPAG9O60271 1321 aaKnown RBP20.71■□□□□ 0.91
CNOT10-219ENST00000556853 TNRQ92752 1358 aa20.71■□□□□ 0.91
CNOT10-219ENST00000556853 IQGAP1P46940 1657 aa20.69■□□□□ 0.9
CNOT10-219ENST00000556853 THEMISQ8N1K5 641 aaPredicted RBP20.68■□□□□ 0.9
CNOT10-219ENST00000556853 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
CNOT10-219ENST00000556853 ATP7AQ04656 1500 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms