RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 PLEKHH2Q8IVE3 1493 aa13.86□□□□□ -0.19
ACTN1-218ENST00000556343 ARAP3Q8WWN8 1544 aa13.85□□□□□ -0.19
ACTN1-218ENST00000556343 GLI2P10070 1586 aa13.85□□□□□ -0.19
ACTN1-218ENST00000556343 TSPY4P0CV99 314 aa13.85□□□□□ -0.19
ACTN1-218ENST00000556343 TSPY10P0CW01 314 aa13.85□□□□□ -0.19
ACTN1-218ENST00000556343 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
ACTN1-218ENST00000556343 TCOF1Q13428 1488 aaKnown RBP13.85□□□□□ -0.19
ACTN1-218ENST00000556343 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
ACTN1-218ENST00000556343 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-218ENST00000556343 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-218ENST00000556343 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.2
ACTN1-218ENST00000556343 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
ACTN1-218ENST00000556343 HNRNPMP52272 730 aaKnown RBP eCLIP13.81□□□□□ -0.2
ACTN1-218ENST00000556343 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
ACTN1-218ENST00000556343 FANCAO15360 1455 aa13.8□□□□□ -0.2
ACTN1-218ENST00000556343 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
ACTN1-218ENST00000556343 PREX2Q70Z35 1606 aa13.8□□□□□ -0.2
ACTN1-218ENST00000556343 CDC42BPAQ5VT25 1732 aa13.79□□□□□ -0.2
ACTN1-218ENST00000556343 AKNAQ7Z591 1439 aa13.79□□□□□ -0.2
ACTN1-218ENST00000556343 TEX14Q8IWB6 1497 aa13.79□□□□□ -0.2
ACTN1-218ENST00000556343 DIP2BQ9P265 1576 aa13.79□□□□□ -0.2
ACTN1-218ENST00000556343 NEO1Q92859 1461 aa13.78□□□□□ -0.2
ACTN1-218ENST00000556343 ACIN1Q9UKV3 1341 aaKnown RBP13.76□□□□□ -0.21
ACTN1-218ENST00000556343 CHIC2Q9UKJ5 165 aa13.76□□□□□ -0.21
ACTN1-218ENST00000556343 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
ACTN1-218ENST00000556343 CFAP74Q9C0B2 1584 aa13.75□□□□□ -0.21
ACTN1-218ENST00000556343 ADGRL1O94910 1474 aa13.75□□□□□ -0.21
ACTN1-218ENST00000556343 ABCC5O15440 1437 aa13.75□□□□□ -0.21
ACTN1-218ENST00000556343 DAPK1P53355 1430 aa13.75□□□□□ -0.21
ACTN1-218ENST00000556343 SCAPERQ9BY12 1400 aa13.75□□□□□ -0.21
ACTN1-218ENST00000556343 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
ACTN1-218ENST00000556343 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
ACTN1-218ENST00000556343 MAP3K4Q9Y6R4 1608 aa13.74□□□□□ -0.21
ACTN1-218ENST00000556343 ROCK1Q13464 1354 aa13.73□□□□□ -0.21
ACTN1-218ENST00000556343 ANKRD30AQ9BXX3 1397 aa13.73□□□□□ -0.21
ACTN1-218ENST00000556343 SPAG9O60271 1321 aaKnown RBP13.73□□□□□ -0.21
ACTN1-218ENST00000556343 MBD5Q9P267 1494 aa13.73□□□□□ -0.21
ACTN1-218ENST00000556343 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
ACTN1-218ENST00000556343 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
ACTN1-218ENST00000556343 HRCP23327 699 aa13.72□□□□□ -0.21
ACTN1-218ENST00000556343 AFAP1Q8N556 730 aa13.71□□□□□ -0.21
ACTN1-218ENST00000556343 DENND4BO75064 1496 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-218ENST00000556343 DNMT1P26358 1616 aaKnown RBP13.71□□□□□ -0.22
ACTN1-218ENST00000556343 ABCC1P33527 1531 aa13.7□□□□□ -0.22
ACTN1-218ENST00000556343 SYCP2Q9BX26 1530 aa13.7□□□□□ -0.22
ACTN1-218ENST00000556343 SHANK2Q9UPX8 1470 aa13.7□□□□□ -0.22
ACTN1-218ENST00000556343 RRP7BPQ9NSQ0 103 aa13.7□□□□□ -0.22
ACTN1-218ENST00000556343 C9orf84Q5VXU9 1444 aa13.7□□□□□ -0.22
ACTN1-218ENST00000556343 SETD5Q9C0A6 1442 aa13.7□□□□□ -0.22
ACTN1-218ENST00000556343 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
ACTN1-218ENST00000556343 RTEL1-TNFRSF6BF6WH68 1400 aa13.68□□□□□ -0.22
ACTN1-218ENST00000556343 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
ACTN1-218ENST00000556343 TRAPPC8Q9Y2L5 1435 aa13.68□□□□□ -0.22
ACTN1-218ENST00000556343 ARHGEF12Q9NZN5 1544 aa13.67□□□□□ -0.22
ACTN1-218ENST00000556343 HFM1A2PYH4 1435 aa13.66□□□□□ -0.22
ACTN1-218ENST00000556343 NCOA1Q15788 1441 aa13.66□□□□□ -0.22
ACTN1-218ENST00000556343 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
ACTN1-218ENST00000556343 RAPGEF3O95398 923 aa13.65□□□□□ -0.22
ACTN1-218ENST00000556343 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
ACTN1-218ENST00000556343 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
ACTN1-218ENST00000556343 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
ACTN1-218ENST00000556343 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
ACTN1-218ENST00000556343 NAIPQ13075 1403 aa13.63□□□□□ -0.23
ACTN1-218ENST00000556343 MAST1Q9Y2H9 1570 aa13.62□□□□□ -0.23
ACTN1-218ENST00000556343 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
ACTN1-218ENST00000556343 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
ACTN1-218ENST00000556343 TRIM52Q96A61 297 aa13.61□□□□□ -0.23
ACTN1-218ENST00000556343 ANKRD50Q9ULJ7 1429 aa13.6□□□□□ -0.23
ACTN1-218ENST00000556343 MAGI2Q86UL8 1455 aa13.6□□□□□ -0.23
ACTN1-218ENST00000556343 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
ACTN1-218ENST00000556343 PPRC1Q5VV67 1664 aaKnown RBP13.59□□□□□ -0.23
ACTN1-218ENST00000556343 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.23
ACTN1-218ENST00000556343 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-218ENST00000556343 ADGBQ8N7X0 1667 aa13.58□□□□□ -0.24
ACTN1-218ENST00000556343 ATP7AQ04656 1500 aa13.58□□□□□ -0.24
ACTN1-218ENST00000556343 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.24
ACTN1-218ENST00000556343 KDM5CP41229 1560 aa13.57□□□□□ -0.24
ACTN1-218ENST00000556343 PLXNC1O60486 1568 aa13.56□□□□□ -0.24
ACTN1-218ENST00000556343 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
ACTN1-218ENST00000556343 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
ACTN1-218ENST00000556343 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
ACTN1-218ENST00000556343 KIF3BO15066 747 aa13.53□□□□□ -0.24
ACTN1-218ENST00000556343 A2MP01023 1474 aa13.53□□□□□ -0.24
ACTN1-218ENST00000556343 ZMYM4Q5VZL5 1548 aa13.53□□□□□ -0.24
ACTN1-218ENST00000556343 INO80Q9ULG1 1556 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-218ENST00000556343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
ACTN1-218ENST00000556343 KANK1Q14678 1352 aa13.52□□□□□ -0.25
ACTN1-218ENST00000556343 ATP10AO60312 1499 aa13.52□□□□□ -0.25
ACTN1-218ENST00000556343 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
ACTN1-218ENST00000556343 RICTORQ6R327 1708 aa13.51□□□□□ -0.25
ACTN1-218ENST00000556343 COL17A1Q9UMD9 1497 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-218ENST00000556343 NUP155O75694 1391 aa13.51□□□□□ -0.25
ACTN1-218ENST00000556343 CLSPNQ9HAW4 1339 aa13.5□□□□□ -0.25
ACTN1-218ENST00000556343 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
ACTN1-218ENST00000556343 KDM6BO15054 1643 aa13.5□□□□□ -0.25
ACTN1-218ENST00000556343 MPHOSPH9Q99550 1183 aa13.49□□□□□ -0.25
ACTN1-218ENST00000556343 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
ACTN1-218ENST00000556343 KIDINS220Q9ULH0 1771 aa13.49□□□□□ -0.25
ACTN1-218ENST00000556343 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
ACTN1-218ENST00000556343 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms