RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
ABCD4-223ENST00000555904 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
ABCD4-223ENST00000555904 FANCAO15360 1455 aa19.22■□□□□ 0.67
ABCD4-223ENST00000555904 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
ABCD4-223ENST00000555904 MIA2Q96PC5 1412 aa19.2■□□□□ 0.66
ABCD4-223ENST00000555904 ZNF777Q9ULD5 760 aaPredicted RBP19.18■□□□□ 0.66
ABCD4-223ENST00000555904 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
ABCD4-223ENST00000555904 NEO1Q92859 1461 aa19.17■□□□□ 0.66
ABCD4-223ENST00000555904 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
ABCD4-223ENST00000555904 TSPOAP1O95153 1857 aa19.16■□□□□ 0.66
ABCD4-223ENST00000555904 PLEKHH2Q8IVE3 1493 aa19.15■□□□□ 0.66
ABCD4-223ENST00000555904 CAMSAP2Q08AD1 1489 aa19.13■□□□□ 0.65
ABCD4-223ENST00000555904 PPRC1Q5VV67 1664 aaKnown RBP19.13■□□□□ 0.65
ABCD4-223ENST00000555904 PTPN23Q9H3S7 1636 aa19.12■□□□□ 0.65
ABCD4-223ENST00000555904 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
ABCD4-223ENST00000555904 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
ABCD4-223ENST00000555904 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
ABCD4-223ENST00000555904 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
ABCD4-223ENST00000555904 ABCC1P33527 1531 aa19.09■□□□□ 0.65
ABCD4-223ENST00000555904 TCOF1Q13428 1488 aaKnown RBP19.09■□□□□ 0.65
ABCD4-223ENST00000555904 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
ABCD4-223ENST00000555904 ZNF644Q9H582 1327 aaPredicted RBP19.08■□□□□ 0.65
ABCD4-223ENST00000555904 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.64
ABCD4-223ENST00000555904 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
ABCD4-223ENST00000555904 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
ABCD4-223ENST00000555904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.05■□□□□ 0.64
ABCD4-223ENST00000555904 DENND4BO75064 1496 aaPredicted RBP19.04■□□□□ 0.64
ABCD4-223ENST00000555904 RSPH4AQ5TD94 716 aa19.03■□□□□ 0.64
ABCD4-223ENST00000555904 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
ABCD4-223ENST00000555904 HNRNPMP52272 730 aaKnown RBP eCLIP19.02■□□□□ 0.64
ABCD4-223ENST00000555904 CCDC141Q6ZP82 1450 aa19.02■□□□□ 0.63
ABCD4-223ENST00000555904 ARHGEF5Q12774 1597 aa19.02■□□□□ 0.63
ABCD4-223ENST00000555904 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
ABCD4-223ENST00000555904 KDM6BO15054 1643 aa19■□□□□ 0.63
ABCD4-223ENST00000555904 ARHGEF12Q9NZN5 1544 aa19■□□□□ 0.63
ABCD4-223ENST00000555904 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
ABCD4-223ENST00000555904 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
ABCD4-223ENST00000555904 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
ABCD4-223ENST00000555904 DNMT1P26358 1616 aaKnown RBP18.98■□□□□ 0.63
ABCD4-223ENST00000555904 DAPK1P53355 1430 aa18.98■□□□□ 0.63
ABCD4-223ENST00000555904 TRAPPC8Q9Y2L5 1435 aa18.98■□□□□ 0.63
ABCD4-223ENST00000555904 RAPGEF3O95398 923 aa18.97■□□□□ 0.63
ABCD4-223ENST00000555904 ITGAEP38570 1179 aa18.96■□□□□ 0.63
ABCD4-223ENST00000555904 AFAP1Q8N556 730 aa18.96■□□□□ 0.63
ABCD4-223ENST00000555904 MYT1LQ9UL68 1186 aa18.96■□□□□ 0.63
ABCD4-223ENST00000555904 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
ABCD4-223ENST00000555904 SPAG9O60271 1321 aaKnown RBP18.95■□□□□ 0.62
ABCD4-223ENST00000555904 ABCC5O15440 1437 aa18.94■□□□□ 0.62
ABCD4-223ENST00000555904 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
ABCD4-223ENST00000555904 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
ABCD4-223ENST00000555904 KDM5CP41229 1560 aa18.93■□□□□ 0.62
ABCD4-223ENST00000555904 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
ABCD4-223ENST00000555904 CROCC2H7BZ55 1655 aa18.93■□□□□ 0.62
ABCD4-223ENST00000555904 FRMPD1Q5SYB0 1578 aa18.93■□□□□ 0.62
ABCD4-223ENST00000555904 COL17A1Q9UMD9 1497 aaPredicted RBP18.92■□□□□ 0.62
ABCD4-223ENST00000555904 ZMYM4Q5VZL5 1548 aa18.92■□□□□ 0.62
ABCD4-223ENST00000555904 HECW2Q9P2P5 1572 aa18.92■□□□□ 0.62
ABCD4-223ENST00000555904 MAGI2Q86UL8 1455 aa18.9■□□□□ 0.62
ABCD4-223ENST00000555904 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
ABCD4-223ENST00000555904 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
ABCD4-223ENST00000555904 MLH3Q9UHC1 1453 aa18.89■□□□□ 0.61
ABCD4-223ENST00000555904 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
ABCD4-223ENST00000555904 MAST1Q9Y2H9 1570 aa18.89■□□□□ 0.61
ABCD4-223ENST00000555904 ANKRD30AQ9BXX3 1397 aa18.88■□□□□ 0.61
ABCD4-223ENST00000555904 INO80Q9ULG1 1556 aaPredicted RBP18.88■□□□□ 0.61
ABCD4-223ENST00000555904 CHIC2Q9UKJ5 165 aa18.87■□□□□ 0.61
ABCD4-223ENST00000555904 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
ABCD4-223ENST00000555904 ROCK1Q13464 1354 aa18.84■□□□□ 0.61
ABCD4-223ENST00000555904 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
ABCD4-223ENST00000555904 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
ABCD4-223ENST00000555904 PTPRKQ15262 1439 aa18.83■□□□□ 0.61
ABCD4-223ENST00000555904 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
ABCD4-223ENST00000555904 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
ABCD4-223ENST00000555904 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
ABCD4-223ENST00000555904 RRP7BPQ9NSQ0 103 aa18.81■□□□□ 0.6
ABCD4-223ENST00000555904 NCOA1Q15788 1441 aa18.81■□□□□ 0.6
ABCD4-223ENST00000555904 YEATS2Q9ULM3 1422 aa18.81■□□□□ 0.6
ABCD4-223ENST00000555904 ABCA6Q8N139 1617 aa18.79■□□□□ 0.6
ABCD4-223ENST00000555904 DIP2CQ9Y2E4 1556 aa18.79■□□□□ 0.6
ABCD4-223ENST00000555904 ATP10AO60312 1499 aa18.77■□□□□ 0.6
ABCD4-223ENST00000555904 DUOX2Q9NRD8 1548 aa18.77■□□□□ 0.6
ABCD4-223ENST00000555904 A2MP01023 1474 aa18.77■□□□□ 0.59
ABCD4-223ENST00000555904 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
ABCD4-223ENST00000555904 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
ABCD4-223ENST00000555904 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
ABCD4-223ENST00000555904 REREQ9P2R6 1566 aa18.73■□□□□ 0.59
ABCD4-223ENST00000555904 DHX29Q7Z478 1369 aaKnown RBP18.73■□□□□ 0.59
ABCD4-223ENST00000555904 ANKRD50Q9ULJ7 1429 aa18.73■□□□□ 0.59
ABCD4-223ENST00000555904 GCC2Q8IWJ2 1684 aa18.73■□□□□ 0.59
ABCD4-223ENST00000555904 NAIPQ13075 1403 aa18.72■□□□□ 0.59
ABCD4-223ENST00000555904 ARID4BQ4LE39 1312 aaPredicted RBP18.7■□□□□ 0.58
ABCD4-223ENST00000555904 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
ABCD4-223ENST00000555904 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
ABCD4-223ENST00000555904 AGLP35573 1532 aa18.66■□□□□ 0.58
ABCD4-223ENST00000555904 KIF3BO15066 747 aa18.66■□□□□ 0.58
ABCD4-223ENST00000555904 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
ABCD4-223ENST00000555904 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
ABCD4-223ENST00000555904 BCORL1Q5H9F3 1711 aa18.62■□□□□ 0.57
ABCD4-223ENST00000555904 KANK1Q14678 1352 aa18.61■□□□□ 0.57
ABCD4-223ENST00000555904 GGT6Q6P531 493 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms