RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
ARHGEF40-203ENST00000554514 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
ARHGEF40-203ENST00000554514 GRIN2AQ12879 1464 aa21.93■■□□□ 1.1
ARHGEF40-203ENST00000554514 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
ARHGEF40-203ENST00000554514 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
ARHGEF40-203ENST00000554514 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
ARHGEF40-203ENST00000554514 AKNAQ7Z591 1439 aa21.91■■□□□ 1.1
ARHGEF40-203ENST00000554514 NEFLP07196 543 aa21.91■■□□□ 1.1
ARHGEF40-203ENST00000554514 ABCC5O15440 1437 aa21.91■■□□□ 1.1
ARHGEF40-203ENST00000554514 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
ARHGEF40-203ENST00000554514 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
ARHGEF40-203ENST00000554514 RAPGEF6Q8TEU7 1601 aa21.89■■□□□ 1.09
ARHGEF40-203ENST00000554514 TSHZ2Q9NRE2 1034 aa21.88■■□□□ 1.09
ARHGEF40-203ENST00000554514 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
ARHGEF40-203ENST00000554514 PLB1Q6P1J6 1458 aa21.87■■□□□ 1.09
ARHGEF40-203ENST00000554514 NBPF8Q3BBV2 869 aa21.85■■□□□ 1.09
ARHGEF40-203ENST00000554514 C11orf95C9JLR9 678 aaPredicted RBP21.84■■□□□ 1.09
ARHGEF40-203ENST00000554514 DNMT1P26358 1616 aaKnown RBP21.82■■□□□ 1.08
ARHGEF40-203ENST00000554514 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
ARHGEF40-203ENST00000554514 ROCK1Q13464 1354 aa21.82■■□□□ 1.08
ARHGEF40-203ENST00000554514 ANKRD30BQ9BXX2 1392 aa21.82■■□□□ 1.08
ARHGEF40-203ENST00000554514 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF40-203ENST00000554514 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
ARHGEF40-203ENST00000554514 TROQ12816 1431 aaPredicted RBP21.79■■□□□ 1.08
ARHGEF40-203ENST00000554514 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
ARHGEF40-203ENST00000554514 CAMSAP2Q08AD1 1489 aa21.78■■□□□ 1.08
ARHGEF40-203ENST00000554514 CCDC184Q52MB2 194 aa21.78■■□□□ 1.08
ARHGEF40-203ENST00000554514 POLR3GLQ9BT43 218 aa21.77■■□□□ 1.08
ARHGEF40-203ENST00000554514 RPRD2Q5VT52 1461 aaKnown RBP21.76■■□□□ 1.07
ARHGEF40-203ENST00000554514 IRX6P78412 446 aaPredicted RBP21.76■■□□□ 1.07
ARHGEF40-203ENST00000554514 KIF14Q15058 1648 aa21.75■■□□□ 1.07
ARHGEF40-203ENST00000554514 SYNJ2O15056 1496 aa21.74■■□□□ 1.07
ARHGEF40-203ENST00000554514 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
ARHGEF40-203ENST00000554514 CNTLNQ9NXG0 1405 aa21.73■■□□□ 1.07
ARHGEF40-203ENST00000554514 CCDC7Q96M83 1385 aa21.73■■□□□ 1.07
ARHGEF40-203ENST00000554514 FAM9BQ8IZU0 186 aa21.73■■□□□ 1.07
ARHGEF40-203ENST00000554514 GPATCH8Q9UKJ3 1502 aaKnown RBP21.73■■□□□ 1.07
ARHGEF40-203ENST00000554514 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
ARHGEF40-203ENST00000554514 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
ARHGEF40-203ENST00000554514 PKD2Q13563 968 aa21.71■■□□□ 1.07
ARHGEF40-203ENST00000554514 NCOA1Q15788 1441 aa21.7■■□□□ 1.06
ARHGEF40-203ENST00000554514 PLEKHD1A6NEE1 506 aa21.7■■□□□ 1.06
ARHGEF40-203ENST00000554514 PZPP20742 1482 aa21.68■■□□□ 1.06
ARHGEF40-203ENST00000554514 KIF7Q2M1P5 1343 aa21.67■■□□□ 1.06
ARHGEF40-203ENST00000554514 PRKRIP1Q9H875 184 aaPredicted RBP21.67■■□□□ 1.06
ARHGEF40-203ENST00000554514 MRS2Q9HD23 443 aa21.67■■□□□ 1.06
ARHGEF40-203ENST00000554514 ITSN2Q9NZM3 1697 aa21.65■■□□□ 1.06
ARHGEF40-203ENST00000554514 ANKRD30AQ9BXX3 1397 aa21.64■■□□□ 1.06
ARHGEF40-203ENST00000554514 HNRNPMP52272 730 aaKnown RBP eCLIP21.61■■□□□ 1.05
ARHGEF40-203ENST00000554514 NUP160Q12769 1436 aa21.61■■□□□ 1.05
ARHGEF40-203ENST00000554514 ANKRD50Q9ULJ7 1429 aa21.61■■□□□ 1.05
ARHGEF40-203ENST00000554514 KIAA1107Q9UPP5 1409 aa21.6■■□□□ 1.05
ARHGEF40-203ENST00000554514 NUP155O75694 1391 aa21.6■■□□□ 1.05
ARHGEF40-203ENST00000554514 ADGBQ8N7X0 1667 aa21.6■■□□□ 1.05
ARHGEF40-203ENST00000554514 KDM2AQ9Y2K7 1162 aa21.59■■□□□ 1.05
ARHGEF40-203ENST00000554514 TSPY4P0CV99 314 aa21.58■■□□□ 1.05
ARHGEF40-203ENST00000554514 TSPY10P0CW01 314 aa21.58■■□□□ 1.05
ARHGEF40-203ENST00000554514 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.04
ARHGEF40-203ENST00000554514 ATP10BO94823 1461 aa21.58■■□□□ 1.04
ARHGEF40-203ENST00000554514 SENP3-EIF4A1A0A087X0R7 540 aa21.56■■□□□ 1.04
ARHGEF40-203ENST00000554514 ADCY10Q96PN6 1610 aa21.56■■□□□ 1.04
ARHGEF40-203ENST00000554514 USP47Q96K76 1375 aa21.56■■□□□ 1.04
ARHGEF40-203ENST00000554514 C9orf84Q5VXU9 1444 aa21.55■■□□□ 1.04
ARHGEF40-203ENST00000554514 ADGRL2O95490 1459 aa21.55■■□□□ 1.04
ARHGEF40-203ENST00000554514 CROCC2H7BZ55 1655 aa21.54■■□□□ 1.04
ARHGEF40-203ENST00000554514 CDC42BPAQ5VT25 1732 aa21.53■■□□□ 1.04
ARHGEF40-203ENST00000554514 ABCA8O94911 1581 aa21.51■■□□□ 1.03
ARHGEF40-203ENST00000554514 ABCC10Q5T3U5 1492 aa21.5■■□□□ 1.03
ARHGEF40-203ENST00000554514 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
ARHGEF40-203ENST00000554514 RBM19Q9Y4C8 960 aaKnown RBP21.49■■□□□ 1.03
ARHGEF40-203ENST00000554514 PTPRGP23470 1445 aa21.49■■□□□ 1.03
ARHGEF40-203ENST00000554514 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
ARHGEF40-203ENST00000554514 MBD5Q9P267 1494 aa21.47■■□□□ 1.03
ARHGEF40-203ENST00000554514 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
ARHGEF40-203ENST00000554514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.022e-6■■■□□ 15.6
ARHGEF40-203ENST00000554514 BCORL1Q5H9F3 1711 aa21.44■■□□□ 1.02
ARHGEF40-203ENST00000554514 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
ARHGEF40-203ENST00000554514 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
ARHGEF40-203ENST00000554514 DHX29Q7Z478 1369 aaKnown RBP21.41■■□□□ 1.02
ARHGEF40-203ENST00000554514 POLR1AO95602 1720 aaPredicted RBP21.4■■□□□ 1.02
ARHGEF40-203ENST00000554514 ST20-MTHFSA0A0A6YYL1 179 aa21.4■■□□□ 1.02
ARHGEF40-203ENST00000554514 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
ARHGEF40-203ENST00000554514 KDM5CP41229 1560 aa21.38■■□□□ 1.01
ARHGEF40-203ENST00000554514 B4GALNT3Q6L9W6 998 aa21.35■■□□□ 1.01
ARHGEF40-203ENST00000554514 SAMD9LQ8IVG5 1584 aa21.34■■□□□ 1.01
ARHGEF40-203ENST00000554514 RALGAPBQ86X10 1494 aa21.34■■□□□ 1.01
ARHGEF40-203ENST00000554514 ANP32EQ9BTT0 268 aa21.34■■□□□ 1.01
ARHGEF40-203ENST00000554514 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1.01
ARHGEF40-203ENST00000554514 ROCK2O75116 1388 aaKnown RBP21.33■■□□□ 1.01
ARHGEF40-203ENST00000554514 TMC1Q8TDI8 760 aa21.33■■□□□ 1.01
ARHGEF40-203ENST00000554514 PPP4R2Q9NY27 417 aa21.33■■□□□ 1
ARHGEF40-203ENST00000554514 UHRF1BP1Q6BDS2 1440 aa21.31■■□□□ 1
ARHGEF40-203ENST00000554514 CDC42BPBQ9Y5S2 1711 aa21.31■■□□□ 1
ARHGEF40-203ENST00000554514 ARHGAP5Q13017 1502 aa21.31■■□□□ 1
ARHGEF40-203ENST00000554514 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
ARHGEF40-203ENST00000554514 FAM135AQ9P2D6 1515 aa21.29■■□□□ 1
ARHGEF40-203ENST00000554514 ARHGEF5Q12774 1597 aa21.29■■□□□ 1
ARHGEF40-203ENST00000554514 PRKCSHP14314 528 aaPredicted RBP21.28■■□□□ 1
ARHGEF40-203ENST00000554514 KDM5DQ9BY66 1539 aa21.27■■□□□ 1
ARHGEF40-203ENST00000554514 NBPF1Q3BBV0 1214 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms