RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 EFCAB2Q5VUJ9 269 aa29.83■■■□□ 2.37
PSEN1-207ENST00000553599 CDC42BPBQ9Y5S2 1711 aa29.82■■■□□ 2.36
PSEN1-207ENST00000553599 PPRC1Q5VV67 1664 aaKnown RBP29.82■■■□□ 2.36
PSEN1-207ENST00000553599 ARHGAP5Q13017 1502 aa29.82■■■□□ 2.36
PSEN1-207ENST00000553599 CFDP1Q9UEE9 299 aaPredicted RBP29.82■■■□□ 2.36
PSEN1-207ENST00000553599 NEO1Q92859 1461 aa29.81■■■□□ 2.36
PSEN1-207ENST00000553599 MIA2Q96PC5 1412 aa29.81■■■□□ 2.36
PSEN1-207ENST00000553599 FANCAO15360 1455 aa29.8■■■□□ 2.36
PSEN1-207ENST00000553599 TSPOAP1O95153 1857 aa29.8■■■□□ 2.36
PSEN1-207ENST00000553599 FGD6Q6ZV73 1430 aa29.74■■■□□ 2.35
PSEN1-207ENST00000553599 AKNAQ7Z591 1439 aa29.72■■■□□ 2.35
PSEN1-207ENST00000553599 PLEKHH2Q8IVE3 1493 aa29.72■■■□□ 2.35
PSEN1-207ENST00000553599 ZNF777Q9ULD5 760 aaPredicted RBP29.67■■■□□ 2.34
PSEN1-207ENST00000553599 KIAA1107Q9UPP5 1409 aa29.67■■■□□ 2.34
PSEN1-207ENST00000553599 SAMD9LQ8IVG5 1584 aa29.67■■■□□ 2.34
PSEN1-207ENST00000553599 PTPN23Q9H3S7 1636 aa29.66■■■□□ 2.34
PSEN1-207ENST00000553599 ADGRL1O94910 1474 aa29.66■■■□□ 2.34
PSEN1-207ENST00000553599 TCOF1Q13428 1488 aaKnown RBP29.66■■■□□ 2.34
PSEN1-207ENST00000553599 CAMSAP2Q08AD1 1489 aa29.65■■■□□ 2.34
PSEN1-207ENST00000553599 ABCC1P33527 1531 aa29.65■■■□□ 2.34
PSEN1-207ENST00000553599 RRBP1Q9P2E9 1410 aaKnown RBP29.63■■■□□ 2.33
PSEN1-207ENST00000553599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.62■■■□□ 2.33
PSEN1-207ENST00000553599 SCAPERQ9BY12 1400 aa29.61■■■□□ 2.33
PSEN1-207ENST00000553599 ZNF644Q9H582 1327 aaPredicted RBP29.6■■■□□ 2.33
PSEN1-207ENST00000553599 RSPH4AQ5TD94 716 aa29.59■■■□□ 2.33
PSEN1-207ENST00000553599 DENND4BO75064 1496 aaPredicted RBP29.57■■■□□ 2.32
PSEN1-207ENST00000553599 SYCP2Q9BX26 1530 aa29.56■■■□□ 2.32
PSEN1-207ENST00000553599 ARHGEF5Q12774 1597 aa29.55■■■□□ 2.32
PSEN1-207ENST00000553599 ARHGEF12Q9NZN5 1544 aa29.55■■■□□ 2.32
PSEN1-207ENST00000553599 MBD5Q9P267 1494 aa29.55■■■□□ 2.32
PSEN1-207ENST00000553599 POGZQ7Z3K3 1410 aa29.54■■■□□ 2.32
PSEN1-207ENST00000553599 ZNF518AQ6AHZ1 1483 aa29.53■■■□□ 2.32
PSEN1-207ENST00000553599 HNRNPMP52272 730 aaKnown RBP eCLIP29.52■■■□□ 2.32
PSEN1-207ENST00000553599 FAM50AQ14320 339 aaKnown RBP29.52■■■□□ 2.32
PSEN1-207ENST00000553599 KDM6BO15054 1643 aa29.52■■■□□ 2.32
PSEN1-207ENST00000553599 CCDC141Q6ZP82 1450 aa29.49■■■□□ 2.31
PSEN1-207ENST00000553599 COL17A1Q9UMD9 1497 aaPredicted RBP29.48■■■□□ 2.31
PSEN1-207ENST00000553599 RICTORQ6R327 1708 aa29.48■■■□□ 2.31
PSEN1-207ENST00000553599 TRAPPC8Q9Y2L5 1435 aa29.48■■■□□ 2.31
PSEN1-207ENST00000553599 DNMT1P26358 1616 aaKnown RBP29.46■■■□□ 2.31
PSEN1-207ENST00000553599 KDM5CP41229 1560 aa29.46■■■□□ 2.31
PSEN1-207ENST00000553599 RAPGEF3O95398 923 aa29.44■■■□□ 2.3
PSEN1-207ENST00000553599 FRMPD1Q5SYB0 1578 aa29.43■■■□□ 2.3
PSEN1-207ENST00000553599 AFAP1Q8N556 730 aa29.43■■■□□ 2.3
PSEN1-207ENST00000553599 ZMYM4Q5VZL5 1548 aa29.43■■■□□ 2.3
PSEN1-207ENST00000553599 DAPK1P53355 1430 aa29.43■■■□□ 2.3
PSEN1-207ENST00000553599 TSPY4P0CV99 314 aa29.42■■■□□ 2.3
PSEN1-207ENST00000553599 TSPY10P0CW01 314 aa29.42■■■□□ 2.3
PSEN1-207ENST00000553599 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
PSEN1-207ENST00000553599 ABCC5O15440 1437 aa29.41■■■□□ 2.3
PSEN1-207ENST00000553599 MAGI2Q86UL8 1455 aa29.4■■■□□ 2.3
PSEN1-207ENST00000553599 MLH3Q9UHC1 1453 aa29.39■■■□□ 2.3
PSEN1-207ENST00000553599 RTEL1-TNFRSF6BF6WH68 1400 aa29.38■■■□□ 2.29
PSEN1-207ENST00000553599 CROCC2H7BZ55 1655 aa29.38■■■□□ 2.29
PSEN1-207ENST00000553599 SPAG9O60271 1321 aaKnown RBP29.38■■■□□ 2.29
PSEN1-207ENST00000553599 MAST1Q9Y2H9 1570 aa29.37■■■□□ 2.29
PSEN1-207ENST00000553599 HECW2Q9P2P5 1572 aa29.36■■■□□ 2.29
PSEN1-207ENST00000553599 C9orf84Q5VXU9 1444 aa29.34■■■□□ 2.29
PSEN1-207ENST00000553599 INO80Q9ULG1 1556 aaPredicted RBP29.33■■■□□ 2.29
PSEN1-207ENST00000553599 ATP7AQ04656 1500 aa29.32■■■□□ 2.28
PSEN1-207ENST00000553599 ZFYVE16Q7Z3T8 1539 aa29.31■■■□□ 2.28
PSEN1-207ENST00000553599 KIDINS220Q9ULH0 1771 aa29.29■■■□□ 2.28
PSEN1-207ENST00000553599 TRIM26Q12899 539 aaPredicted RBP29.28■■■□□ 2.28
PSEN1-207ENST00000553599 ADGRL2O95490 1459 aa29.28■■■□□ 2.28
PSEN1-207ENST00000553599 MYT1LQ9UL68 1186 aa29.27■■■□□ 2.28
PSEN1-207ENST00000553599 PTPRKQ15262 1439 aa29.27■■■□□ 2.28
PSEN1-207ENST00000553599 ROCK1Q13464 1354 aa29.26■■■□□ 2.28
PSEN1-207ENST00000553599 ITGAEP38570 1179 aa29.26■■■□□ 2.27
PSEN1-207ENST00000553599 PLXNC1O60486 1568 aa29.26■■■□□ 2.27
PSEN1-207ENST00000553599 ANKRD30AQ9BXX3 1397 aa29.26■■■□□ 2.27
PSEN1-207ENST00000553599 ADGBQ8N7X0 1667 aa29.25■■■□□ 2.27
PSEN1-207ENST00000553599 ARHGEF40Q8TER5 1519 aa29.24■■■□□ 2.27
PSEN1-207ENST00000553599 NCOA1Q15788 1441 aa29.22■■■□□ 2.27
PSEN1-207ENST00000553599 CHIC2Q9UKJ5 165 aa29.21■■■□□ 2.27
PSEN1-207ENST00000553599 YEATS2Q9ULM3 1422 aa29.2■■■□□ 2.27
PSEN1-207ENST00000553599 DIP2CQ9Y2E4 1556 aa29.2■■■□□ 2.26
PSEN1-207ENST00000553599 ATP10AO60312 1499 aa29.19■■■□□ 2.26
PSEN1-207ENST00000553599 ABCA6Q8N139 1617 aa29.19■■■□□ 2.26
PSEN1-207ENST00000553599 REREQ9P2R6 1566 aa29.17■■■□□ 2.26
PSEN1-207ENST00000553599 KIF15Q9NS87 1388 aa29.15■■■□□ 2.26
PSEN1-207ENST00000553599 DUOX2Q9NRD8 1548 aa29.14■■■□□ 2.25
PSEN1-207ENST00000553599 A2MP01023 1474 aa29.13■■■□□ 2.25
PSEN1-207ENST00000553599 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
PSEN1-207ENST00000553599 RRP7BPQ9NSQ0 103 aa29.12■■■□□ 2.25
PSEN1-207ENST00000553599 HFM1A2PYH4 1435 aa29.1■■■□□ 2.25
PSEN1-207ENST00000553599 ERBINQ96RT1 1412 aa29.08■■■□□ 2.25
PSEN1-207ENST00000553599 AGLP35573 1532 aa29.06■■■□□ 2.24
PSEN1-207ENST00000553599 GCC2Q8IWJ2 1684 aa29.05■■■□□ 2.24
PSEN1-207ENST00000553599 NAIPQ13075 1403 aa29.04■■■□□ 2.24
PSEN1-207ENST00000553599 ANKRD50Q9ULJ7 1429 aa29.03■■■□□ 2.24
PSEN1-207ENST00000553599 EIF2AK4Q9P2K8 1649 aaKnown RBP29.03■■■□□ 2.24
PSEN1-207ENST00000553599 BCORL1Q5H9F3 1711 aa29■■■□□ 2.23
PSEN1-207ENST00000553599 ACIN1Q9UKV3 1341 aaKnown RBP28.96■■■□□ 2.23
PSEN1-207ENST00000553599 SETD5Q9C0A6 1442 aa28.96■■■□□ 2.23
PSEN1-207ENST00000553599 KIF3BO15066 747 aa28.93■■■□□ 2.22
PSEN1-207ENST00000553599 SIGLEC1Q9BZZ2 1709 aa28.93■■■□□ 2.22
PSEN1-207ENST00000553599 ARID4BQ4LE39 1312 aaPredicted RBP28.93■■■□□ 2.22
PSEN1-207ENST00000553599 RNF17Q9BXT8 1623 aaKnown RBP28.91■■■□□ 2.22
PSEN1-207ENST00000553599 HRCP23327 699 aa28.89■■■□□ 2.22
PSEN1-207ENST00000553599 PPP6R1Q9UPN7 881 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms