RNA–Protein interactions for RNA: ENST00000553453.5

SIPA1L1-204, Transcript of signal induced proliferation associated 1 like 1, human

TSL 5

Gene SIPA1L1, Length 521 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L1-204	ENST00000553453	FANCA	O15360	1455 aa		29.6	■■■□□ 2.33
SIPA1L1-204	ENST00000553453	CDC42BPA	Q5VT25	1732 aa		29.59	■■■□□ 2.33
SIPA1L1-204	ENST00000553453	ITSN2	Q9NZM3	1697 aa		29.59	■■■□□ 2.33
SIPA1L1-204	ENST00000553453	NEO1	Q92859	1461 aa		29.57	■■■□□ 2.32
SIPA1L1-204	ENST00000553453	CFAP74	Q9C0B2	1584 aa		29.56	■■■□□ 2.32
SIPA1L1-204	ENST00000553453	PHLDB1	Q86UU1	1377 aa		29.56	■■■□□ 2.32
SIPA1L1-204	ENST00000553453	CDC42BPB	Q9Y5S2	1711 aa		29.56	■■■□□ 2.32
SIPA1L1-204	ENST00000553453	MYOM3	Q5VTT5	1437 aa		29.55	■■■□□ 2.32
SIPA1L1-204	ENST00000553453	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.54	■■■□□ 2.32
SIPA1L1-204	ENST00000553453	AKNA	Q7Z591	1439 aa		29.52	■■■□□ 2.32
SIPA1L1-204	ENST00000553453	MIA2	Q96PC5	1412 aa		29.49	■■■□□ 2.31
SIPA1L1-204	ENST00000553453	ADGRL1	O94910	1474 aa		29.45	■■■□□ 2.31
SIPA1L1-204	ENST00000553453	PLEKHH2	Q8IVE3	1493 aa		29.43	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	FGD6	Q6ZV73	1430 aa		29.43	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	SCAPER	Q9BY12	1400 aa		29.42	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	SAMD9L	Q8IVG5	1584 aa		29.42	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	ZNF644	Q9H582	1327 aa	Predicted RBP	29.41	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	KDM6B	O15054	1643 aa		29.39	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	CAMSAP2	Q08AD1	1489 aa		29.39	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	ABCC1	P33527	1531 aa		29.39	■■■□□ 2.3
SIPA1L1-204	ENST00000553453	DENND4B	O75064	1496 aa	Predicted RBP	29.38	■■■□□ 2.29
SIPA1L1-204	ENST00000553453	KIAA1107	Q9UPP5	1409 aa		29.37	■■■□□ 2.29
SIPA1L1-204	ENST00000553453	PTPN23	Q9H3S7	1636 aa		29.35	■■■□□ 2.29
SIPA1L1-204	ENST00000553453	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.35	■■■□□ 2.29	8e-7	■■■■□ 24.2
SIPA1L1-204	ENST00000553453	COL17A1	Q9UMD9	1497 aa	Predicted RBP	29.34	■■■□□ 2.29
SIPA1L1-204	ENST00000553453	SYCP2	Q9BX26	1530 aa		29.34	■■■□□ 2.29
SIPA1L1-204	ENST00000553453	RAPGEF3	O95398	923 aa		29.32	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	FAM50A	Q14320	339 aa	Known RBP	29.32	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	ARHGEF12	Q9NZN5	1544 aa		29.31	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	TCOF1	Q13428	1488 aa	Known RBP	29.31	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	POGZ	Q7Z3K3	1410 aa		29.3	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	RSPH4A	Q5TD94	716 aa		29.29	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	ZNF518A	Q6AHZ1	1483 aa		29.29	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	TRAPPC8	Q9Y2L5	1435 aa		29.28	■■■□□ 2.28
SIPA1L1-204	ENST00000553453	MBD5	Q9P267	1494 aa		29.26	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	AFAP1	Q8N556	730 aa		29.26	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	RRBP1	Q9P2E9	1410 aa	Known RBP	29.25	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	RICTOR	Q6R327	1708 aa		29.24	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	CCDC141	Q6ZP82	1450 aa		29.23	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	ARHGEF5	Q12774	1597 aa		29.22	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	FRMPD1	Q5SYB0	1578 aa		29.22	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	MYT1L	Q9UL68	1186 aa		29.22	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.21	■■■□□ 2.27
SIPA1L1-204	ENST00000553453	TSPY4	P0CV99	314 aa		29.2	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	TSPY10	P0CW01	314 aa		29.2	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	SPAG9	O60271	1321 aa	Known RBP	29.19	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	KDM5C	P41229	1560 aa		29.18	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	ZMYM4	Q5VZL5	1548 aa		29.17	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	ABCC5	O15440	1437 aa		29.14	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	DAPK1	P53355	1430 aa		29.14	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	DNMT1	P26358	1616 aa	Known RBP	29.14	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	MAGI2	Q86UL8	1455 aa		29.14	■■■□□ 2.26
SIPA1L1-204	ENST00000553453	MLH3	Q9UHC1	1453 aa		29.13	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	HECW2	Q9P2P5	1572 aa		29.12	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	ZFYVE16	Q7Z3T8	1539 aa		29.1	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	ITGAE	P38570	1179 aa		29.09	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	RTEL1-TNFRSF6B	F6WH68	1400 aa		29.09	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	C9orf84	Q5VXU9	1444 aa		29.09	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	SHANK2	Q9UPX8	1470 aa		29.08	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	ATP7A	Q04656	1500 aa		29.08	■■■□□ 2.25
SIPA1L1-204	ENST00000553453	CROCC2	H7BZ55	1655 aa		29.06	■■■□□ 2.24
SIPA1L1-204	ENST00000553453	INO80	Q9ULG1	1556 aa	Predicted RBP	29.05	■■■□□ 2.24
SIPA1L1-204	ENST00000553453	MAST1	Q9Y2H9	1570 aa		29.05	■■■□□ 2.24
SIPA1L1-204	ENST00000553453	YEATS2	Q9ULM3	1422 aa		29.04	■■■□□ 2.24
SIPA1L1-204	ENST00000553453	KIDINS220	Q9ULH0	1771 aa		29.03	■■■□□ 2.24
SIPA1L1-204	ENST00000553453	CHIC2	Q9UKJ5	165 aa		29.03	■■■□□ 2.24
SIPA1L1-204	ENST00000553453	ARHGEF40	Q8TER5	1519 aa		29.02	■■■□□ 2.24
SIPA1L1-204	ENST00000553453	ATP10A	O60312	1499 aa		28.99	■■■□□ 2.23
SIPA1L1-204	ENST00000553453	ANKRD30A	Q9BXX3	1397 aa		28.99	■■■□□ 2.23
SIPA1L1-204	ENST00000553453	PTPRK	Q15262	1439 aa		28.98	■■■□□ 2.23
SIPA1L1-204	ENST00000553453	ABCA6	Q8N139	1617 aa		28.98	■■■□□ 2.23
SIPA1L1-204	ENST00000553453	DIP2C	Q9Y2E4	1556 aa		28.97	■■■□□ 2.23
SIPA1L1-204	ENST00000553453	ADGRL2	O95490	1459 aa		28.94	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	RRP7BP	Q9NSQ0	103 aa		28.94	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	ADGB	Q8N7X0	1667 aa		28.93	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	PLXNC1	O60486	1568 aa		28.93	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	ROCK1	Q13464	1354 aa		28.92	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	NCOA1	Q15788	1441 aa		28.92	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	A2M	P01023	1474 aa		28.91	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	KIF15	Q9NS87	1388 aa		28.91	■■■□□ 2.22
SIPA1L1-204	ENST00000553453	TRIM26	Q12899	539 aa	Predicted RBP	28.88	■■■□□ 2.21
SIPA1L1-204	ENST00000553453	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.88	■■■□□ 2.21
SIPA1L1-204	ENST00000553453	RERE	Q9P2R6	1566 aa		28.88	■■■□□ 2.21
SIPA1L1-204	ENST00000553453	DHX29	Q7Z478	1369 aa	Known RBP	28.88	■■■□□ 2.21
SIPA1L1-204	ENST00000553453	DUOX2	Q9NRD8	1548 aa		28.86	■■■□□ 2.21
SIPA1L1-204	ENST00000553453	AGL	P35573	1532 aa		28.79	■■■□□ 2.2
SIPA1L1-204	ENST00000553453	ERBIN	Q96RT1	1412 aa		28.79	■■■□□ 2.2
SIPA1L1-204	ENST00000553453	ANKRD50	Q9ULJ7	1429 aa		28.77	■■■□□ 2.2
SIPA1L1-204	ENST00000553453	KIF3B	O15066	747 aa		28.76	■■■□□ 2.19
SIPA1L1-204	ENST00000553453	HFM1	A2PYH4	1435 aa		28.75	■■■□□ 2.19
SIPA1L1-204	ENST00000553453	SIGLEC1	Q9BZZ2	1709 aa		28.74	■■■□□ 2.19
SIPA1L1-204	ENST00000553453	MLEC	Q14165	292 aa		28.73	■■■□□ 2.19
SIPA1L1-204	ENST00000553453	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.72	■■■□□ 2.19
SIPA1L1-204	ENST00000553453	NAIP	Q13075	1403 aa		28.72	■■■□□ 2.19
SIPA1L1-204	ENST00000553453	GGT6	Q6P531	493 aa		28.69	■■■□□ 2.18
SIPA1L1-204	ENST00000553453	GCC2	Q8IWJ2	1684 aa		28.69	■■■□□ 2.18
SIPA1L1-204	ENST00000553453	BCORL1	Q5H9F3	1711 aa		28.67	■■■□□ 2.18
SIPA1L1-204	ENST00000553453	SETD5	Q9C0A6	1442 aa		28.64	■■■□□ 2.18
SIPA1L1-204	ENST00000553453	ESF1	Q9H501	851 aa	Known RBP	28.63	■■■□□ 2.17
SIPA1L1-204	ENST00000553453	PPP6R1	Q9UPN7	881 aa		28.62	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms